Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp1g02160 Schrenkiella parvula HOM05D004820 ORTHO05D005946 3.3e-189 665.2 424 100.0
Thhalv10009621m.g Eutrema salsugineum HOM05D004820 ORTHO05D005946 4.3e-173 611.7 364 95.9
CARHR002470 Cardamine hirsuta HOM05D004820 ORTHO05D005946 1.2e-170 603.6 425 88.5
AL1G12610 Arabidopsis lyrata HOM05D004820 ORTHO05D005946 3.8e-169 598.6 425 80.2
C08p52910 Brassica napus HOM05D004820 ORTHO05D005946 8.4e-169 597.4 430 83.3
BolC8t52807H Brassica oleracea HOM05D004820 ORTHO05D005946 2.4e-168 595.9 431 83.8
Carub.0001s0228 Capsella rubella HOM05D004820 ORTHO05D005946 3.2e-168 595.5 426 88.5
A09p68340 Brassica napus HOM05D004820 ORTHO05D005946 5.4e-168 594.7 430 77.9
AT1G03140 Arabidopsis thaliana HOM05D004820 ORTHO05D005946 3.5e-167 592.0 322 93.8
Aa31LG1G9390 Aethionema arabicum HOM05D004820 ORTHO05D005946 8.7e-166 587.4 426 82.4
BraA08t35645Z Brassica rapa HOM05D004820 ORTHO05D005946 1.9e-160 569.7 428 86.9
A08p37470 Brassica napus HOM05D004820 ORTHO05D005946 3.2e-160 568.9 428 86.7
BolC8t46841H Brassica oleracea HOM05D004820 ORTHO05D005946 5.1e-158 561.6 326 90.2
C08p00420 Brassica napus HOM05D004820 ORTHO05D005946 2.8e-156 555.8 426 81.7
BcaC07g42265 Brassica carinata HOM05D004820 ORTHO05D005946 4.5e-154 548.5 427 74.7
THA.LOC104815940 Tarenaya hassleriana HOM05D004820 ORTHO05D005946 1.6e-143 513.5 424 74.1
THA.LOC104801242 Tarenaya hassleriana HOM05D004820 ORTHO05D005946 2.6e-138 496.1 426 71.6
Eucgr.K03365 Eucalyptus grandis HOM05D004820 ORTHO05D005946 1.2e-135 487.3 426 72.1
TWI14G0518 Tripterygium wilfordii HOM05D004820 ORTHO05D005946 2.1e-135 486.5 424 69.6
CANSAT25G3765 Cannabis sativa HOM05D004820 ORTHO05D005946 3.6e-135 485.7 326 77.9
Lj4g0024215 Lotus japonicus HOM05D004820 ORTHO05D005946 4.7e-135 485.3 425 70.1
Atru.chr5.1456 Acer truncatum HOM05D004820 ORTHO05D005946 3.9e-134 482.3 425 69.4
Cpa.g.sc52.45 Carica papaya HOM05D004820 ORTHO05D005946 8.8e-134 481.1 429 70.4
Manes.01G206900 Manihot esculenta HOM05D004820 ORTHO05D005946 8.8e-134 481.1 325 76.9
Glyma.03G155000 Glycine max HOM05D004820 ORTHO05D005946 1.1e-133 480.7 425 68.0
VMungo1383G2933 Vigna mungo HOM05D004820 ORTHO05D005946 2.0e-133 479.9 425 68.7
Glyma.19G157200 Glycine max HOM05D004820 ORTHO05D005946 3.3e-133 479.2 423 67.4
Psat3g064000 Pisum sativum HOM05D004820 ORTHO05D005946 4.4e-133 478.8 425 72.9
Medtr7g095000 Medicago truncatula HOM05D004820 ORTHO05D005946 9.7e-133 477.6 425 71.1
TPR.G9917 Trifolium pratense HOM05D004820 ORTHO05D005946 1.3e-132 477.2 425 68.0
Ca_08606_v3 Cicer arietinum L. HOM05D004820 ORTHO05D005946 5.3e-131 471.9 425 70.1
PGR044G0684 Punica granatum HOM05D004820 ORTHO05D005946 1.5e-130 470.3 422 72.5
Migut.N02046 Erythranthe guttata HOM05D004820 ORTHO05D005946 3.4e-130 469.2 427 62.5
SGA_v2.0_scaffold81G26015 Striga asiatica HOM05D004820 ORTHO05D005946 5.9e-130 468.4 427 64.6
Gohir.D08G075000 Gossypium hirsutum HOM05D004820 ORTHO05D005946 7.7e-130 468.0 429 62.5
Ciclev10020348m.g Citrus clementina HOM05D004820 ORTHO05D005946 2.2e-129 466.5 427 68.1
QL12p021397 Quercus lobata HOM05D004820 ORTHO05D005946 2.9e-129 466.1 426 63.1
Nn4g26288 Nelumbo nucifera HOM05D004820 ORTHO05D005946 5.0e-129 465.3 426 64.3
CsaV3_7G028060 Cucumis sativus L. HOM05D004820 ORTHO05D005946 6.5e-129 464.9 325 74.5
arahy.Tifrunner.gnm1.ann1.JHLY8X Arachis hypogaea HOM05D004820 ORTHO05D005946 5.5e-128 461.8 443 64.1
arahy.Tifrunner.gnm1.ann1.NQ54M2 Arachis hypogaea HOM05D004820 ORTHO05D005946 5.5e-128 461.8 443 64.1
Gorai.004G216400 Gossypium raimondii HOM05D004820 ORTHO05D005946 5.5e-128 461.8 428 66.8
Duzib138G0452 Durio zibethinus HOM05D004820 ORTHO05D005946 7.2e-128 461.5 429 66.4
Duzib211G0468 Durio zibethinus HOM05D004820 ORTHO05D005946 7.2e-128 461.5 426 69.7
TAR362G1079 Trochodendron aralioides HOM05D004820 ORTHO05D005946 7.2e-128 461.5 326 74.8
CiPaw.08G106000 Carya illinoinensis HOM05D004820 ORTHO05D005946 9.4e-128 461.1 424 66.7
arahy.Tifrunner.gnm1.ann1.HALK3W Arachis hypogaea HOM05D004820 ORTHO05D005946 1.2e-127 460.7 443 63.9
Lalb_Chr06g0162971 Lupinus albus HOM05D004820 ORTHO05D005946 1.2e-127 460.7 426 66.9
Gohir.A08G066300 Gossypium hirsutum HOM05D004820 ORTHO05D005946 1.6e-127 460.3 329 75.1
Gohir.A08G186300 Gossypium hirsutum HOM05D004820 ORTHO05D005946 1.6e-127 460.3 428 66.6
MD11G1284100 Malus domestica HOM05D004820 ORTHO05D005946 1.6e-127 460.3 319 75.2
Phvul.005G035400 Phaseolus vulgaris HOM05D004820 ORTHO05D005946 1.6e-127 460.3 424 66.5
Thecc.01G277300 Theobroma cacao HOM05D004820 ORTHO05D005946 1.6e-127 460.3 426 66.9
Gohir.D08G204400 Gossypium hirsutum HOM05D004820 ORTHO05D005946 2.1e-127 459.9 428 66.6
MD03G1263300 Malus domestica HOM05D004820 ORTHO05D005946 2.1e-127 459.9 319 75.2
PSO210G1690 Papaver somniferum HOM05D004820 ORTHO05D005946 4.7e-127 458.8 321 74.8
Actinidia00769 Actinidia chinensis HOM05D004820 ORTHO05D005946 6.1e-127 458.4 426 71.1
MELO3C015826.2 Cucumis melo HOM05D004820 ORTHO05D005946 1.4e-126 457.2 430 67.9
Potri.005G210600 Populus trichocarpa HOM05D004820 ORTHO05D005946 1.4e-126 457.2 327 74.9
Sopen09g027030 Solanum pennellii HOM05D004820 ORTHO05D005946 3.9e-126 455.7 322 76.4
Solyc09g065280.4 Solanum lycopersicum HOM05D004820 ORTHO05D005946 5.2e-126 455.3 322 76.1
Sed0001544 Sechium edule HOM05D004820 ORTHO05D005946 6.7e-126 454.9 324 72.8
PGSC0003DMG400019362 Solanum tuberosum HOM05D004820 ORTHO05D005946 1.5e-125 453.8 322 75.8
PSO761G0350 Papaver somniferum HOM05D004820 ORTHO05D005946 2.0e-125 453.4 320 74.1
CAN.G590.6 Capsicum annuum HOM05D004820 ORTHO05D005946 4.4e-125 452.2 322 76.1
Sc05g0005630 Simmondsia chinensis HOM05D004820 ORTHO05D005946 1.3e-124 450.7 427 62.1
Oeu041704.1 Olea europaea HOM05D004820 ORTHO05D005946 1.7e-124 450.3 325 73.2
Sabra05G0160800 Salix brachista HOM05D004820 ORTHO05D005946 1.7e-124 450.3 327 73.7
AL1G45340 Arabidopsis lyrata HOM05D004820 ORTHO05D005946 2.8e-124 449.5 428 63.3
Prupe.8G239700 Prunus persica HOM05D004820 ORTHO05D005946 3.7e-124 449.1 313 76.0
arahy.Tifrunner.gnm1.ann1.X2D3U2 Arachis hypogaea HOM05D004820 ORTHO05D005946 1.8e-123 446.8 325 72.6
Gorai.004G079300 Gossypium raimondii HOM05D004820 ORTHO05D005946 1.8e-123 446.8 431 59.4
Cc03_g10020 Coffea canephora HOM05D004820 ORTHO05D005946 4.1e-123 445.7 427 64.4
CSS0006431 Camellia sinensis var. sinensis HOM05D004820 ORTHO05D005946 1.6e-122 443.7 304 76.0
EL10Ac8g18597 Beta vulgaris HOM05D004820 ORTHO05D005946 2.0e-122 443.4 322 73.3
MSTRG.17449 Avicennia marina HOM05D004820 ORTHO05D005946 5.9e-122 441.8 325 74.5
HPP92_018354 Vanilla planifolia HOM05D004820 ORTHO05D005946 8.5e-121 438.0 322 71.4
AUR62012894 Chenopodium quinoa HOM05D004820 ORTHO05D005946 6.1e-119 431.8 320 71.2
SpUn0083_0020 Schrenkiella parvula HOM05D004820 ORTHO05D005946 8.0e-119 431.4 420 60.5
Ah.01g024010 Amaranthus hybridus HOM05D004820 ORTHO05D005946 6.7e-118 428.3 436 61.9
AUR62027118 Chenopodium quinoa HOM05D004820 ORTHO05D005946 8.8e-118 427.9 323 70.0
RcHm_v2.0_Chr6g0290841 Rosa chinensis HOM05D004820 ORTHO05D005946 8.8e-118 427.9 322 72.4
FAN15G1635 Fragaria x ananassa HOM05D004820 ORTHO05D005946 9.7e-117 424.5 322 71.7
FAN20G0972 Fragaria x ananassa HOM05D004820 ORTHO05D005946 9.7e-117 424.5 322 71.7
Sp5g11480 Schrenkiella parvula HOM05D004820 ORTHO05D005946 9.7e-117 424.5 281 80.1
FvH4_2g23380 Fragaria vesca HOM05D004820 ORTHO05D005946 1.3e-116 424.1 322 71.7
HanXRQChr01g0003021 Helianthus annuus HOM05D004820 ORTHO05D005946 3.7e-116 422.5 401 66.1
Lsat_1_v5_gn_5_187781 Lactuca sativa HOM05D004820 ORTHO05D005946 4.8e-116 422.2 401 62.8
SEGI_11361 Sequoiadendron giganteum HOM05D004820 ORTHO05D005946 1.8e-115 420.2 317 68.8
FAN27G0992 Fragaria x ananassa HOM05D004820 ORTHO05D005946 1.2e-114 417.5 331 69.8
FAN24G1940 Fragaria x ananassa HOM05D004820 ORTHO05D005946 2.2e-113 413.3 340 67.9
Mapoly0140s0012 Marchantia polymorpha HOM05D004820 ORTHO05D005946 4.2e-112 409.1 321 68.5
ECA248G2754 Erigeron canadensis HOM05D004820 ORTHO05D005946 7.2e-112 408.3 399 60.2
Zm00001eb324990 Zea mays HOM05D004820 ORTHO05D005946 2.3e-110 403.3 325 66.8
QL03p020183 Quercus lobata HOM05D004820 ORTHO05D005946 3.4e-109 399.4 293 72.4
Zm00001eb426810 Zea mays HOM05D004820 ORTHO05D005946 3.4e-109 399.4 320 66.2
Lj4g0011679 Lotus japonicus HOM05D004820 ORTHO05D005946 5.7e-109 398.7 406 63.8
Zm00001eb426860 Zea mays HOM05D004820 ORTHO05D005946 1.7e-108 397.1 320 66.6
Pp3c21_19780 Physcomitrium patens HOM05D004820 ORTHO05D005946 2.8e-108 396.4 331 63.7
Zm00001eb426800 Zea mays HOM05D004820 ORTHO05D005946 2.4e-107 393.3 320 65.6
Zm00001eb426820 Zea mays HOM05D004820 ORTHO05D005946 2.0e-106 390.2 319 65.8
AT1G54590 Arabidopsis thaliana HOM05D004820 ORTHO05D005946 8.6e-105 384.8 294 72.4
Os07g0571900 Oryza sativa ssp. japonica HOM05D004820 ORTHO05D005946 3.3e-104 382.9 331 63.4
SMO356G0463 Selaginella moellendorffii HOM05D004820 ORTHO05D005946 2.3e-102 376.7 303 66.3
Zm00001eb426850 Zea mays HOM05D004820 ORTHO05D005946 3.0e-102 376.3 299 66.6
PGSC0003DMG400010602 Solanum tuberosum HOM05D004820 ORTHO05D005946 2.8e-95 353.2 314 64.3
PGSC0003DMG400010600 Solanum tuberosum HOM05D004820 ORTHO05D005946 6.1e-95 352.1 320 63.4
Lalb_Chr02g0142711 Lupinus albus HOM05D004820 ORTHO05D005946 1.2e-93 347.8 229 78.2
Rhsim01G0274100 Rhododendron simsii HOM05D004820 ORTHO05D005946 4.1e-91 339.3 287 65.5
Zm00001eb216840 Zea mays HOM05D004820 ORTHO05D005946 1.6e-90 337.4 313 58.8
CBR_g23335 Chara braunii HOM05D004820 ORTHO05D005946 1.4e-86 324.3 347 51.9
Solyc07g052190.1 Solanum lycopersicum HOM05D004820 ORTHO05D005946 1.9e-80 303.9 271 63.1
COL.COLO4_09079 Corchorus olitorius HOM05D004820 ORTHO05D005946 1.1e-75 288.1 353 50.1
GSVIVG01001158001 Vitis vinifera HOM05D004820 ORTHO05D005946 8.9e-70 268.5 161 84.5
Zm00001eb426870 Zea mays HOM05D004820 ORTHO05D005946 1.1e-67 261.5 166 78.9
CAN.G198.19 Capsicum annuum HOM05D004820 ORTHO05D005946 1.3e-65 254.6 241 60.6
Sopen07g025700 Solanum pennellii HOM05D004820 ORTHO05D005946 6.6e-65 252.3 238 61.3
Sopen07g025830 Solanum pennellii HOM05D004820 ORTHO05D005946 3.4e-61 240.0 238 58.4
Oeu028072.3 Olea europaea HOM05D004820 ORTHO05D005946 2.4e-59 233.8 287 63.4
Cpa.g.sc52.46 Carica papaya HOM05D004820 ORTHO05D005946 2.7e-58 230.3 137 86.1
SHI31236 Sapria himalayana HOM05D004820 ORTHO05D005946 6.6e-57 225.7 189 66.7
Solyc07g052050.2 Solanum lycopersicum HOM05D004820 ORTHO05D005946 2.1e-55 220.7 158 71.5
SHI31234 Sapria himalayana HOM05D004820 ORTHO05D005946 1.5e-53 214.5 115 91.3
HanXRQChr15g0487721 Helianthus annuus HOM05D004820 ORTHO05D005946 5.6e-48 196.1 168 60.1
Zm00001eb426830 Zea mays HOM05D004820 ORTHO05D005946 1.8e-46 191.0 118 81.4
Sopen07g025690 Solanum pennellii HOM05D004820 ORTHO05D005946 8.4e-44 182.2 130 73.8
MCO06G052 Micromonas commoda HOM05D004820 ORTHO05D005946 1.1e-38 165.2 156 50.6
Lj1g0027313 Lotus japonicus HOM05D004820 ORTHO05D005946 1.8e-38 164.5 159 55.3
CARHR182160 Cardamine hirsuta HOM05D004820 ORTHO05D005946 1.2e-34 151.8 116 69.0
Os03g0701100 Oryza sativa ssp. japonica HOM05D004820 ORTHO05D005946 1.1e-32 145.2 181 49.2
Cre13.g567750 Chlamydomonas reinhardtii HOM05D004820 ORTHO05D005946 1.9e-32 144.4 305 35.7
Sopen07g025610 Solanum pennellii HOM05D004820 ORTHO05D005946 6.3e-31 139.4 143 58.7
BraA09t42170Z Brassica rapa HOM05D004820 ORTHO05D005946 5.0e-28 129.8 163 65.6
TAR365G1077 Trochodendron aralioides HOM05D004820 ORTHO05D005946 7.4e-24 115.9 97 62.9
Gohir.D05G222300 Gossypium hirsutum HOM05D004820 ORTHO05D005946 4.2e-19 100.1 60 78.3
Zm00001eb078380 Zea mays HOM05D004820 ORTHO05D005946 5.5e-19 99.8 72 66.7
Gohir.D11G242500 Gossypium hirsutum HOM05D004820 ORTHO05D005946 1.2e-18 98.6 60 76.7
Gorai.009G229700 Gossypium raimondii HOM05D004820 ORTHO05D005946 1.2e-18 98.6 60 76.7
Gorai.011G187700 Gossypium raimondii HOM05D004820 ORTHO05D005946 6.1e-18 96.3 60 75.0
Nitab4.5_0003852g0050 Nicotiana tabacum HOM05D004820 ORTHO05D005946 1.8e-17 94.7 65 73.8
Zm00001eb180190 Zea mays HOM05D004820 ORTHO05D005946 3.9e-17 93.6 68 66.2
Zm00001eb368520 Zea mays HOM05D004820 ORTHO05D005946 8.8e-17 92.4 68 64.7
Zm00001eb017440 Zea mays HOM05D004820 ORTHO05D005946 2.0e-16 91.3 66 65.2
C06p09790 Brassica napus HOM05D004820 ORTHO05D001418 2.2e-15 87.8 46 91.3
BolC6t36051H Brassica oleracea HOM05D004820 ORTHO05D001418 2.2e-15 87.8 46 91.3
Nn4g23784 Nelumbo nucifera HOM05D004820 ORTHO05D005946 2.6e-13 80.9 107 45.8
Nitab4.5_0003327g0040 Nicotiana tabacum HOM05D004820 ORTHO05D005946 3.5e-13 80.5 57 71.9
BcaC08g43579 Brassica carinata HOM05D004820 ORTHO05D001418 2.3e-09 67.8 35 91.4
vmacro14915 Vaccinium macrocarpon HOM05D004820 ORTHO05D005946 1.8e-06 58.2 42 69.0


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