Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen09g012610 Solanum pennellii HOM05D006570 ORTHO05D008193 1.1e-273 946.0 477 100.0
Solyc09g018850.3 Solanum lycopersicum HOM05D006570 ORTHO05D008193 1.2e-269 932.6 477 98.3
PGSC0003DMG400020287 Solanum tuberosum HOM05D006570 ORTHO05D008193 5.3e-236 820.8 452 92.7
Nitab4.5_0005967g0010 Nicotiana tabacum HOM05D006570 ORTHO05D008193 5.5e-209 731.1 477 79.0
Nitab4.5_0009028g0030 Nicotiana tabacum HOM05D006570 ORTHO05D008193 9.3e-209 730.3 521 75.4
Peaxi162Scf12724g00014 Petunia axillaris HOM05D006570 ORTHO05D008193 2.6e-203 712.2 502 74.1
CAN.G3.13 Capsicum annuum HOM05D006570 ORTHO05D008193 3.6e-200 701.8 389 90.2
Lj2A1109T67 Lonicera japonica HOM05D006570 ORTHO05D008193 3.1e-172 609.0 456 68.9
Actinidia11648 Actinidia chinensis HOM05D006570 ORTHO05D008193 5.4e-172 608.2 500 63.6
Dinv28772 Davidia involucrata HOM05D006570 ORTHO05D008193 3.2e-169 599.0 515 61.7
Oeu020442.2 Olea europaea HOM05D006570 ORTHO05D008193 1.3e-165 587.0 456 64.3
Migut.D00755 Erythranthe guttata HOM05D006570 ORTHO05D008193 4.1e-164 582.0 478 62.6
SalBow6G3933 Salvia bowleyana HOM05D006570 ORTHO05D008193 4.1e-164 582.0 441 66.0
Cc01_g15710 Coffea canephora HOM05D006570 ORTHO05D008193 1.2e-163 580.5 482 62.7
SalBow2G2795 Salvia bowleyana HOM05D006570 ORTHO05D008193 2.7e-163 579.3 441 65.5
TAR362G0032 Trochodendron aralioides HOM05D006570 ORTHO05D008193 1.3e-162 577.0 448 65.2
Atru.chr6.3468 Acer truncatum HOM05D006570 ORTHO05D008193 2.1e-160 569.7 426 66.4
vmacro02851 Vaccinium macrocarpon HOM05D006570 ORTHO05D008193 6.8e-159 564.7 426 68.1
Hma1.2p1_0834F.1_g225720 Hydrangea macrophylla HOM05D006570 ORTHO05D008193 8.9e-159 564.3 399 70.4
Manes.13G058200 Manihot esculenta HOM05D006570 ORTHO05D008193 4.1e-156 555.4 445 63.6
Haze_04512 Corylus avellana HOM05D006570 ORTHO05D008193 7.0e-156 554.7 429 65.0
HanXRQChr16g0508391 Helianthus annuus HOM05D006570 ORTHO05D008193 1.2e-155 553.9 438 62.8
Ciclev10015195m.g Citrus clementina HOM05D006570 ORTHO05D008193 1.0e-154 550.8 453 62.9
GSVIVG01004124001 Vitis vinifera HOM05D006570 ORTHO05D008193 1.0e-154 550.8 446 64.1
Cfa006298 Carpinus fangiana HOM05D006570 ORTHO05D008193 1.7e-154 550.1 415 66.0
Potri.014G198000 Populus trichocarpa HOM05D006570 ORTHO05D008193 4.3e-153 545.4 470 60.0
TWI18G1431 Tripterygium wilfordii HOM05D006570 ORTHO05D008193 7.3e-153 544.7 467 60.8
CiPaw.07G077200 Carya illinoinensis HOM05D006570 ORTHO05D008193 1.2e-152 543.9 440 64.1
Prupe.6G214800 Prunus persica HOM05D006570 ORTHO05D008193 1.6e-152 543.5 409 66.0
Ah.11g050650 Amaranthus hybridus HOM05D006570 ORTHO05D008193 4.7e-152 542.0 424 63.4
CANSAT01G0840 Cannabis sativa HOM05D006570 ORTHO05D008193 6.2e-152 541.6 428 63.6
ECA236G3480 Erigeron canadensis HOM05D006570 ORTHO05D008193 1.8e-151 540.0 433 62.4
Gohir.D07G093500 Gossypium hirsutum HOM05D006570 ORTHO05D008193 4.0e-151 538.9 446 62.8
Gorai.001G100200 Gossypium raimondii HOM05D006570 ORTHO05D008193 4.0e-151 538.9 446 62.8
MBI10_g46813_MAGBIO Magnolia biondii HOM05D006570 ORTHO05D008193 4.0e-151 538.9 484 58.5
Aa31sc565G50 Aethionema arabicum HOM05D006570 ORTHO05D008193 8.9e-151 537.7 468 59.2
Duzib133G0843 Durio zibethinus HOM05D006570 ORTHO05D008193 1.5e-150 537.0 456 62.9
RcHm_v2.0_Chr5g0052821 Rosa chinensis HOM05D006570 ORTHO05D008193 4.4e-150 535.4 429 64.3
THA.LOC104815379 Tarenaya hassleriana HOM05D006570 ORTHO05D008193 4.4e-150 535.4 431 62.4
Cpa.g.sc8.9 Carica papaya HOM05D006570 ORTHO05D008193 9.8e-150 534.3 473 59.8
Thecc.01G203700 Theobroma cacao HOM05D006570 ORTHO05D008193 2.2e-149 533.1 430 64.2
DCAR_012712 Daucus carota HOM05D006570 ORTHO05D008193 3.7e-149 532.3 396 66.4
FvH4_3g28500 Fragaria vesca HOM05D006570 ORTHO05D008193 4.9e-149 531.9 450 61.1
PSO170G2695 Papaver somniferum HOM05D006570 ORTHO05D008193 4.9e-149 531.9 429 61.3
Glyma.07G059700 Glycine max HOM05D006570 ORTHO05D008193 6.4e-149 531.6 433 63.0
Lj3g0023743 Lotus japonicus HOM05D006570 ORTHO05D008193 1.9e-148 530.0 457 60.0
Ca_23570_v3 Cicer arietinum L. HOM05D006570 ORTHO05D008193 9.2e-148 527.7 415 63.6
Ca_23579_v3 Cicer arietinum L. HOM05D006570 ORTHO05D008193 9.2e-148 527.7 415 63.6
EL10Ac5g10565 Beta vulgaris HOM05D006570 ORTHO05D008193 1.2e-147 527.3 410 62.9
Gohir.A07G088500 Gossypium hirsutum HOM05D006570 ORTHO05D008193 1.6e-147 526.9 445 62.2
FAN21G3910 Fragaria x ananassa HOM05D006570 ORTHO05D008193 1.7e-146 523.5 435 62.5
COL.COLO4_19720 Corchorus olitorius HOM05D006570 ORTHO05D008193 2.3e-146 523.1 404 66.3
BcaB03g16147 Brassica carinata HOM05D006570 ORTHO05D008193 6.6e-146 521.5 444 59.9
Aqoxy1G01428 Aquilegia oxysepala HOM05D006570 ORTHO05D008193 8.6e-146 521.2 467 58.7
C04p43140 Brassica napus HOM05D006570 ORTHO05D008193 8.6e-146 521.2 424 62.0
MD15G1141300 Malus domestica HOM05D006570 ORTHO05D008193 1.1e-145 520.8 403 67.0
BcaC02g09469 Brassica carinata HOM05D006570 ORTHO05D008193 1.5e-145 520.4 441 60.1
Aqoxy7G03970 Aquilegia oxysepala HOM05D006570 ORTHO05D008193 1.9e-145 520.0 480 57.7
CARHR218120 Cardamine hirsuta HOM05D006570 ORTHO05D008193 2.5e-145 519.6 424 61.8
Carub.0007s3008 Capsella rubella HOM05D006570 ORTHO05D008193 4.3e-145 518.8 451 58.8
Sp7g09050 Schrenkiella parvula HOM05D006570 ORTHO05D008193 1.6e-144 516.9 444 59.5
AL9U11910 Arabidopsis lyrata HOM05D006570 ORTHO05D008193 2.8e-144 516.2 441 59.6
Medtr8g028105 Medicago truncatula HOM05D006570 ORTHO05D008193 3.6e-144 515.8 452 58.6
A04p09180 Brassica napus HOM05D006570 ORTHO05D008193 6.2e-144 515.0 449 59.9
arahy.Tifrunner.gnm1.ann1.N5JW36 Arachis hypogaea HOM05D006570 ORTHO05D008193 8.1e-144 514.6 442 60.9
CsaV3_6G007600 Cucumis sativus L. HOM05D006570 ORTHO05D008193 8.1e-144 514.6 464 56.7
Phvul.010G109900 Phaseolus vulgaris HOM05D006570 ORTHO05D008193 8.1e-144 514.6 459 60.1
TPR.G5123 Trifolium pratense HOM05D006570 ORTHO05D008193 8.1e-144 514.6 433 59.4
ClCG06G001630 Citrullus lanatus HOM05D006570 ORTHO05D008193 1.1e-143 514.2 440 60.5
AUR62032342 Chenopodium quinoa HOM05D006570 ORTHO05D008193 6.8e-143 511.5 427 60.2
VMungo0331G0798 Vigna mungo HOM05D006570 ORTHO05D008193 1.2e-142 510.8 463 58.5
AUR62008045 Chenopodium quinoa HOM05D006570 ORTHO05D008193 1.5e-142 510.4 427 60.2
Hund09495 Selenicereus undatus HOM05D006570 ORTHO05D008193 2.6e-142 509.6 384 63.3
CDE09G0147 Ceratophyllum demersum HOM05D006570 ORTHO05D008193 1.3e-141 507.3 449 58.6
AT4G12740 Arabidopsis thaliana HOM05D006570 ORTHO05D008193 1.7e-141 506.9 407 61.2
arahy.Tifrunner.gnm1.ann1.L2UBUE Arachis hypogaea HOM05D006570 ORTHO05D008193 2.2e-141 506.5 485 56.7
Lalb_Chr10g0100201 Lupinus albus HOM05D006570 ORTHO05D008193 8.3e-141 504.6 443 59.4
Sabra14G0132400 Salix brachista HOM05D006570 ORTHO05D008193 1.1e-140 504.2 558 51.4
Thhalv10024575m.g Eutrema salsugineum HOM05D006570 ORTHO05D008193 2.4e-140 503.1 443 58.2
PGR083G1749 Punica granatum HOM05D006570 ORTHO05D008193 5.4e-140 501.9 421 62.0
Sc05g0001500 Simmondsia chinensis HOM05D006570 ORTHO05D008193 1.2e-139 500.7 415 61.2
AUR62028620 Chenopodium quinoa HOM05D006570 ORTHO05D008193 3.5e-139 499.2 430 59.1
BolC4t25891H Brassica oleracea HOM05D006570 ORTHO05D008193 6.6e-138 495.0 449 57.7
ATR0743G076 Amborella trichopoda HOM05D006570 ORTHO05D008193 2.8e-136 489.6 415 59.5
Lsat_1_v5_gn_8_98640 Lactuca sativa HOM05D006570 ORTHO05D008193 2.8e-136 489.6 428 61.0
Rhsim13G0056200 Rhododendron simsii HOM05D006570 ORTHO05D008193 4.7e-136 488.8 393 63.6
BraA04t16613Z Brassica rapa HOM05D006570 ORTHO05D008193 1.4e-135 487.3 447 57.7
HPP92_007590 Vanilla planifolia HOM05D006570 ORTHO05D008193 2.6e-134 483.0 434 58.8
Psat4g158840 Pisum sativum HOM05D006570 ORTHO05D008193 1.2e-131 474.2 372 62.9
Hma1.2p1_0834F.1_g225710 Hydrangea macrophylla HOM05D006570 ORTHO05D008193 2.8e-128 463.0 363 65.6
Os12g0211400 Oryza sativa ssp. japonica HOM05D006570 ORTHO05D008193 1.3e-125 454.1 423 55.3
MELO3C022371.2 Cucumis melo HOM05D006570 ORTHO05D008193 2.2e-125 453.4 414 56.5
SHI10196 Sapria himalayana HOM05D006570 ORTHO05D008193 8.4e-125 451.4 431 55.5
Zm00001eb411200 Zea mays HOM05D006570 ORTHO05D008193 9.3e-124 448.0 457 52.1
SEGI_12299 Sequoiadendron giganteum HOM05D006570 ORTHO05D008193 2.8e-120 436.4 455 51.6
Os12g0212100 Oryza sativa ssp. japonica HOM05D006570 ORTHO05D008193 4.5e-118 429.1 355 60.3
unitig_90.g27554 Utricularia gibba HOM05D006570 ORTHO05D008193 7.1e-116 421.8 424 53.1
Actinidia23139 Actinidia chinensis HOM05D006570 ORTHO05D008193 3.3e-113 412.9 439 51.3
Pp3c18_200 Physcomitrium patens HOM05D006570 ORTHO05D008193 5.5e-108 395.6 509 44.8
FAN25G2405 Fragaria x ananassa HOM05D006570 ORTHO05D008193 9.3e-108 394.8 516 47.1
Hma1.2p1_1756F.1_g301050 Hydrangea macrophylla HOM05D006570 ORTHO05D008193 2.7e-107 393.3 320 64.1
Eucgr.H00676 Eucalyptus grandis HOM05D006570 ORTHO05D008193 1.1e-100 371.3 313 62.0
Mapoly0043s0062 Marchantia polymorpha HOM05D006570 ORTHO05D008193 1.4e-100 370.9 512 42.4
MBI10_g40441_MAGBIO Magnolia biondii HOM05D006570 ORTHO05D008193 2.7e-99 366.7 309 59.5
SMO202G0040 Selaginella moellendorffii HOM05D006570 ORTHO05D008193 5.5e-84 315.8 294 55.8
PRCOL_00001086 Prasinoderma coloniale HOM05D006570 ORTHO05D008193 4.2e-76 289.7 411 43.3
QL01p050877 Quercus lobata HOM05D006570 ORTHO05D008193 1.1e-71 275.0 262 55.7
FAN11G0847 Fragaria x ananassa HOM05D006570 ORTHO05D008193 3.1e-71 273.5 246 57.7
MCO12G048 Micromonas commoda HOM05D006570 ORTHO05D008193 3.2e-68 263.5 489 37.4
Cre02.g082000 Chlamydomonas reinhardtii HOM05D006570 ORTHO05D008193 4.7e-59 233.0 515 32.2
GSVIVG01038286001 Vitis vinifera HOM05D006570 ORTHO05D008193 1.4e-55 221.5 184 58.7
CSS0008113 Camellia sinensis var. sinensis HOM05D006570 ORTHO05D008193 8.6e-53 212.2 126 78.6
CSS0032158 Camellia sinensis var. sinensis HOM05D006570 ORTHO05D008193 8.6e-53 212.2 126 78.6
DCAR_012713 Daucus carota HOM05D006570 ORTHO05D008193 3.3e-44 183.7 127 68.5
Ca_29093_v3 Cicer arietinum L. HOM05D006570 ORTHO05D008193 1.8e-42 177.9 292 37.0
QL01p050896 Quercus lobata HOM05D006570 ORTHO05D008193 7.8e-38 162.5 112 70.5
CDE02G1275 Ceratophyllum demersum HOM05D006570 ORTHO05D008193 3.7e-32 143.7 134 57.5
QL05p014267 Quercus lobata HOM05D006570 ORTHO05D008193 1.4e-26 125.2 190 41.1
CBR_g38520 Chara braunii HOM05D000019 ORTHO05D000048 4.1e-23 113.6 68 72.1
QL05p014599 Quercus lobata HOM05D006570 ORTHO05D008193 1.3e-21 108.6 136 47.8
Glyma.16G028601 Glycine max HOM05D006570 ORTHO05D008193 4.3e-20 103.6 114 48.2
PGR142G0081 Punica granatum HOM05D006570 ORTHO05D008193 2.8e-19 100.9 120 48.3
CBR_g38518 Chara braunii HOM05D000019 ORTHO05D000048 8.1e-11 72.8 128 32.8


User provided reference genes

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