Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen06g025060 Solanum pennellii HOM05D007289 ORTHO05D009215 5.8e-217 757.3 385 100.0
Solyc06g066780.3 Solanum lycopersicum HOM05D007289 ORTHO05D009215 9.2e-215 750.0 385 98.7
PGSC0003DMG400016511 Solanum tuberosum HOM05D007289 ORTHO05D009215 8.3e-208 726.9 385 95.3
CAN.G395.19 Capsicum annuum HOM05D007289 ORTHO05D009215 6.0e-166 587.8 385 80.3
Nitab4.5_0002327g0060 Nicotiana tabacum HOM05D007289 ORTHO05D009215 8.2e-155 550.8 375 77.3
Peaxi162Scf00207g00834 Petunia axillaris HOM05D007289 ORTHO05D009215 3.8e-144 515.4 306 82.7
Dinv30529 Davidia involucrata HOM05D007289 ORTHO05D009215 5.2e-109 398.7 396 56.1
CSS0039074 Camellia sinensis var. sinensis HOM05D007289 ORTHO05D009215 1.2e-108 397.5 384 58.9
MD17G1197800 Malus domestica HOM05D007289 ORTHO05D009215 1.2e-108 397.5 388 58.2
Prupe.3G073900 Prunus persica HOM05D007289 ORTHO05D009215 5.7e-108 395.2 382 58.1
Cc04_g03590 Coffea canephora HOM05D007289 ORTHO05D009215 3.7e-107 392.5 382 58.1
Oeu033497.1 Olea europaea HOM05D007289 ORTHO05D009215 2.0e-105 386.7 364 58.5
MSTRG.11091 Avicennia marina HOM05D007289 ORTHO05D009215 5.0e-104 382.1 386 54.7
Ciclev10025766m.g Citrus clementina HOM05D007289 ORTHO05D009215 4.3e-103 379.0 386 54.9
Lj9C506T12 Lonicera japonica HOM05D007289 ORTHO05D009215 5.6e-103 378.6 405 53.1
vmacro18934 Vaccinium macrocarpon HOM05D007289 ORTHO05D009215 1.2e-102 377.5 382 56.3
Migut.I00845 Erythranthe guttata HOM05D007289 ORTHO05D009215 1.8e-101 373.6 369 53.9
TAR383G0594 Trochodendron aralioides HOM05D007289 ORTHO05D009215 5.2e-101 372.1 392 55.1
RcHm_v2.0_Chr2g0137421 Rosa chinensis HOM05D007289 ORTHO05D009215 6.8e-101 371.7 387 54.0
Rhsim08G0218600 Rhododendron simsii HOM05D007289 ORTHO05D009215 8.9e-101 371.3 400 53.0
FvH4_6g30910 Fragaria vesca HOM05D007289 ORTHO05D009215 3.4e-100 369.4 383 55.4
FAN02G0535 Fragaria x ananassa HOM05D007289 ORTHO05D009215 5.8e-100 368.6 380 54.7
Manes.04G121300 Manihot esculenta HOM05D007289 ORTHO05D009215 2.2e-99 366.7 376 54.0
PSO782G0119 Papaver somniferum HOM05D007289 ORTHO05D009215 1.1e-98 364.4 370 54.6
Gorai.002G058300 Gossypium raimondii HOM05D007289 ORTHO05D009215 1.0e-96 357.8 370 56.8
Potri.001G178100 Populus trichocarpa HOM05D007289 ORTHO05D009215 1.0e-96 357.8 369 52.8
Lalb_Chr14g0373531 Lupinus albus HOM05D007289 ORTHO05D009215 3.9e-96 355.9 372 52.4
PGR102G0666 Punica granatum HOM05D007289 ORTHO05D009215 3.9e-96 355.9 381 54.3
Sabra01G0148500 Salix brachista HOM05D007289 ORTHO05D009215 1.1e-95 354.4 377 51.5
Thecc.06G082700 Theobroma cacao HOM05D007289 ORTHO05D009215 1.9e-95 353.6 368 55.7
Gohir.A02G122500 Gossypium hirsutum HOM05D007289 ORTHO05D009215 2.5e-95 353.2 365 56.7
Lalb_Chr22g0351171 Lupinus albus HOM05D007289 ORTHO05D009215 2.5e-95 353.2 377 52.5
Lj3g0010801 Lotus japonicus HOM05D007289 ORTHO05D009215 3.3e-95 352.8 390 51.0
Ca_01106_v3 Cicer arietinum L. HOM05D007289 ORTHO05D009215 4.3e-95 352.4 376 51.9
Atru.chr1.3224 Acer truncatum HOM05D007289 ORTHO05D009215 1.6e-94 350.5 385 51.2
CANSAT56G1700 Cannabis sativa HOM05D007289 ORTHO05D009215 2.1e-94 350.1 385 51.2
VMungo1080G1522 Vigna mungo HOM05D007289 ORTHO05D009215 4.7e-94 349.0 384 50.0
arahy.Tifrunner.gnm1.ann1.UJ7D22 Arachis hypogaea HOM05D007289 ORTHO05D009215 8.1e-94 348.2 378 50.5
COL.COLO4_30328 Corchorus olitorius HOM05D007289 ORTHO05D009215 1.1e-93 347.8 382 53.7
Glyma.13G360800 Glycine max HOM05D007289 ORTHO05D009215 1.1e-93 347.8 376 50.3
Aqoxy7G01850 Aquilegia oxysepala HOM05D007289 ORTHO05D009215 1.4e-93 347.4 391 49.9
Phvul.005G172600 Phaseolus vulgaris HOM05D007289 ORTHO05D009215 1.8e-93 347.1 384 51.3
Psat5g299280 Pisum sativum HOM05D007289 ORTHO05D009215 2.3e-93 346.7 376 52.1
TWI75G1369 Tripterygium wilfordii HOM05D007289 ORTHO05D009215 2.3e-93 346.7 372 52.7
arahy.Tifrunner.gnm1.ann1.HRS6MU Arachis hypogaea HOM05D007289 ORTHO05D009215 4.0e-93 345.9 378 51.6
THA.LOC104808206 Tarenaya hassleriana HOM05D007289 ORTHO05D009215 8.9e-93 344.7 381 52.2
DCAR_016227 Daucus carota HOM05D007289 ORTHO05D009215 1.5e-92 344.0 379 51.2
Hund06601 Selenicereus undatus HOM05D007289 ORTHO05D009215 2.6e-92 343.2 395 50.1
MELO3C023367.2 Cucumis melo HOM05D007289 ORTHO05D009215 3.4e-92 342.8 380 52.1
TPR.G37243 Trifolium pratense HOM05D007289 ORTHO05D009215 3.4e-92 342.8 373 51.2
Aa31LG4G690 Aethionema arabicum HOM05D007289 ORTHO05D009215 5.8e-92 342.0 381 51.2
QL05p025382 Quercus lobata HOM05D007289 ORTHO05D009215 7.5e-92 341.7 382 52.4
CiPaw.02G152300 Carya illinoinensis HOM05D007289 ORTHO05D009215 1.7e-91 340.5 363 52.6
CsaV3_7G033000 Cucumis sativus L. HOM05D007289 ORTHO05D009215 1.7e-91 340.5 379 51.5
AUR62011614 Chenopodium quinoa HOM05D007289 ORTHO05D009215 2.9e-91 339.7 394 48.7
Cfa002049 Carpinus fangiana HOM05D007289 ORTHO05D009215 3.7e-91 339.3 378 50.3
GSVIVG01017153001 Vitis vinifera HOM05D007289 ORTHO05D009215 3.7e-91 339.3 334 56.3
CARHR074820 Cardamine hirsuta HOM05D007289 ORTHO05D009215 4.9e-91 339.0 370 53.0
Thhalv10018735m.g Eutrema salsugineum HOM05D007289 ORTHO05D009215 4.9e-91 339.0 377 52.0
AUR62016430 Chenopodium quinoa HOM05D007289 ORTHO05D009215 8.3e-91 338.2 394 48.5
ECA232G0523 Erigeron canadensis HOM05D007289 ORTHO05D009215 1.9e-90 337.0 381 50.9
AL2G41080 Arabidopsis lyrata HOM05D007289 ORTHO05D009215 3.2e-90 336.3 369 51.2
Sed0021795 Sechium edule HOM05D007289 ORTHO05D009215 3.2e-90 336.3 382 51.8
AT1G80420 Arabidopsis thaliana HOM05D007289 ORTHO05D009215 1.6e-89 334.0 370 51.6
Medtr2g102430 Medicago truncatula HOM05D007289 ORTHO05D009215 2.1e-89 333.6 371 52.0
Lsat_1_v5_gn_4_103480 Lactuca sativa HOM05D007289 ORTHO05D009215 3.5e-89 332.8 386 50.3
HanXRQChr16g0501051 Helianthus annuus HOM05D007289 ORTHO05D009215 4.6e-89 332.4 376 49.2
Sc12g0009160 Simmondsia chinensis HOM05D007289 ORTHO05D009215 4.6e-89 332.4 389 49.4
MBI04_g26647_MAGBIO Magnolia biondii HOM05D007289 ORTHO05D009215 1.3e-88 330.9 374 50.3
Sp5g35390 Schrenkiella parvula HOM05D007289 ORTHO05D009215 5.1e-88 328.9 370 52.2
Os06g0144000 Oryza sativa ssp. japonica HOM05D007289 ORTHO05D009215 8.6e-88 328.2 369 49.1
Carub.0002s2715 Capsella rubella HOM05D007289 ORTHO05D009215 2.8e-86 323.2 377 50.4
Nitab4.5_0021849g0010 Nicotiana tabacum HOM05D007289 ORTHO05D009215 4.7e-86 322.4 203 79.8
BolC2t09743H Brassica oleracea HOM05D007289 ORTHO05D009215 2.4e-85 320.1 369 49.6
BcaC03g15968 Brassica carinata HOM05D007289 ORTHO05D009215 3.1e-85 319.7 369 49.9
FAN09G0173 Fragaria x ananassa HOM05D007289 ORTHO05D009215 4.0e-85 319.3 362 51.4
C02p37330 Brassica napus HOM05D007289 ORTHO05D009215 5.2e-85 318.9 369 49.9
BcaB05g25270 Brassica carinata HOM05D002927 ORTHO05D003841 1.3e-83 314.3 371 48.8
A02p23560 Brassica napus HOM05D007289 ORTHO05D009215 6.4e-83 312.0 371 48.8
BraA02t07349Z Brassica rapa HOM05D007289 ORTHO05D009215 6.4e-83 312.0 371 48.8
SalBow2G1977 Salvia bowleyana HOM05D007289 ORTHO05D009215 1.9e-82 310.5 373 47.2
Actinidia15825 Actinidia chinensis HOM05D002927 ORTHO05D003841 2.4e-82 310.1 315 56.5
Duzib235G0864 Durio zibethinus HOM05D007289 ORTHO05D009215 9.2e-82 308.1 366 50.8
EL10Ac9g21988 Beta vulgaris HOM05D007289 ORTHO05D009215 5.6e-79 298.9 456 41.7
PSO339G0085 Papaver somniferum HOM05D007289 ORTHO05D009215 4.9e-75 285.8 274 54.4
Nn8g39279 Nelumbo nucifera HOM05D007289 ORTHO05D009215 1.9e-74 283.9 385 47.0
ATR0037G063 Amborella trichopoda HOM05D007289 ORTHO05D009215 1.7e-72 277.3 404 42.1
CDE02G4373 Ceratophyllum demersum HOM05D004733 ORTHO05D005925 2.3e-72 276.9 391 42.2
SEGI_14605 Sequoiadendron giganteum HOM05D007289 ORTHO05D009215 1.3e-64 251.1 331 42.0
Haze_16457 Corylus avellana HOM05D007289 ORTHO05D009215 1.4e-61 241.1 571 32.0
Cpa.g.sc10.164 Carica papaya HOM05D007289 ORTHO05D009215 1.2e-60 238.0 293 46.8
HPP92_000676 Vanilla planifolia HOM05D007289 ORTHO05D009215 2.4e-58 230.3 270 47.0
Glyma.15G013100 Glycine max HOM05D007289 ORTHO05D009215 5.1e-56 222.6 240 51.7
Pp3c15_20480 Physcomitrium patens HOM05D007289 ORTHO05D009215 1.7e-51 207.6 311 37.0
Eucgr.F03006 Eucalyptus grandis HOM05D007289 ORTHO05D009215 1.1e-50 204.9 225 51.1
Gohir.D03G073900 Gossypium hirsutum HOM05D007289 ORTHO05D009215 3.3e-47 193.4 194 58.2
unitig_21.g20513 Utricularia gibba HOM05D007289 ORTHO05D009215 2.8e-46 190.3 389 35.5
FAN05G4017 Fragaria x ananassa HOM05D007289 ORTHO05D009215 1.1e-45 188.3 202 53.5
Mapoly0044s0047 Marchantia polymorpha HOM05D007289 ORTHO05D009215 4.1e-45 186.4 373 34.9
FAN05G4871 Fragaria x ananassa HOM05D007289 ORTHO05D009215 9.0e-45 185.3 113 76.1
ClCG09G002310 Citrullus lanatus HOM05D007289 ORTHO05D009215 1.0e-43 181.8 179 55.9
TWI12G0812 Tripterygium wilfordii HOM05D007289 ORTHO05D009215 2.4e-37 160.6 196 49.0
SEGI_13111 Sequoiadendron giganteum HOM05D007289 ORTHO05D009215 1.9e-34 151.0 198 44.4
Zm00001eb377280 Zea mays HOM05D007289 ORTHO05D009215 5.7e-31 139.4 190 41.1
Lj2P1136T43 Lonicera japonica HOM05D007289 ORTHO05D009215 6.9e-29 132.5 113 59.3
CBR_g23739 Chara braunii HOM05D007289 ORTHO05D009215 5.9e-28 129.4 142 43.0
ClCG09G002320 Citrullus lanatus HOM05D007289 ORTHO05D009215 1.7e-27 127.9 249 36.1
Hma1.2p1_0845F.1_g227540 Hydrangea macrophylla HOM05D007289 ORTHO05D009215 9.7e-23 112.1 132 53.0
Ah.01g011120 Amaranthus hybridus HOM05D007289 ORTHO05D009215 4.8e-22 109.8 147 42.9
Pp3c21_18730 Physcomitrium patens HOM05D007289 ORTHO05D009215 8.5e-11 72.4 80 38.8


User provided reference genes

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