Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc12g076350.2 Solanum lycopersicum HOM05D006209 ORTHO05D007645 9.2e-110 400.2 199 100.0
Sopen12g027590 Solanum pennellii HOM05D006209 ORTHO05D007645 2.6e-104 382.1 190 98.9
CAN.G648.11 Capsicum annuum HOM05D006209 ORTHO05D007645 1.5e-96 356.3 193 91.2
Nitab4.5_0000025g0370 Nicotiana tabacum HOM05D006209 ORTHO05D007645 4.9e-95 351.3 192 91.7
Nitab4.5_0001566g0050 Nicotiana tabacum HOM05D006209 ORTHO05D007645 1.1e-94 350.1 193 91.2
Peaxi162Scf00801g00218 Petunia axillaris HOM05D006209 ORTHO05D007645 3.0e-92 342.0 194 89.7
Thecc.03G026100 Theobroma cacao HOM05D006209 ORTHO05D007645 9.0e-81 303.9 194 78.9
CSS0022134 Camellia sinensis var. sinensis HOM05D006209 ORTHO05D007645 4.5e-80 301.6 193 77.2
COL.COLO4_36757 Corchorus olitorius HOM05D006209 ORTHO05D007645 1.7e-79 299.7 195 76.4
Atru.chr9.2581 Acer truncatum HOM05D006209 ORTHO05D007645 4.9e-79 298.1 191 78.5
Ciclev10020078m.g Citrus clementina HOM05D006209 ORTHO05D007645 1.1e-78 297.0 195 76.4
Manes.06G110500 Manihot esculenta HOM05D006209 ORTHO05D007645 4.2e-78 295.0 193 76.2
GSVIVG01007643001 Vitis vinifera HOM05D006209 ORTHO05D007645 1.6e-77 293.1 190 75.3
Gorai.003G115100 Gossypium raimondii HOM05D006209 ORTHO05D007645 2.1e-77 292.7 193 75.1
MD14G1171200 Malus domestica HOM05D006209 ORTHO05D007645 2.1e-77 292.7 190 74.2
Prupe.5G165300 Prunus persica HOM05D006209 ORTHO05D007645 2.1e-77 292.7 190 75.8
Gohir.D03G109100 Gossypium hirsutum HOM05D006209 ORTHO05D007645 2.7e-77 292.4 193 75.1
Potri.015G084900 Populus trichocarpa HOM05D006209 ORTHO05D007645 2.7e-77 292.4 195 75.4
Cpa.g.sc159.17 Carica papaya HOM05D006209 ORTHO05D007645 6.0e-77 291.2 186 74.2
CiPaw.11G019400 Carya illinoinensis HOM05D006209 ORTHO05D007645 1.8e-76 289.7 191 76.4
Gohir.A03G057200 Gossypium hirsutum HOM05D006209 ORTHO05D007645 3.0e-76 288.9 193 75.6
Lj5C130T5 Lonicera japonica HOM05D006209 ORTHO05D007645 3.9e-76 288.5 191 75.4
MD06G1165600 Malus domestica HOM05D006209 ORTHO05D007645 1.5e-75 286.6 190 73.7
RcHm_v2.0_Chr7g0192541 Rosa chinensis HOM05D006209 ORTHO05D007645 1.9e-75 286.2 191 73.3
Lalb_Chr23g0273351 Lupinus albus HOM05D006209 ORTHO05D007645 2.5e-75 285.8 193 74.6
ClCG03G003010 Citrullus lanatus HOM05D006209 ORTHO05D007645 3.3e-75 285.4 192 76.0
TAR371G0588 Trochodendron aralioides HOM05D006209 ORTHO05D007645 3.3e-75 285.4 190 74.2
PSO754G0074 Papaver somniferum HOM05D006209 ORTHO05D007645 7.4e-75 284.3 196 71.9
Hund02788 Selenicereus undatus HOM05D006209 ORTHO05D007645 7.4e-75 284.3 209 69.4
PSO063G1215 Papaver somniferum HOM05D006209 ORTHO05D007645 1.3e-74 283.5 196 71.9
Sabra15G0107900 Salix brachista HOM05D006209 ORTHO05D007645 1.3e-74 283.5 195 72.8
PGR083G0853 Punica granatum HOM05D006209 ORTHO05D007645 1.6e-74 283.1 200 71.5
SalBow5G0732 Salvia bowleyana HOM05D006209 ORTHO05D007645 1.6e-74 283.1 199 71.9
SalBow5G2378 Salvia bowleyana HOM05D006209 ORTHO05D007645 1.6e-74 283.1 199 71.9
Aqoxy5G03742 Aquilegia oxysepala HOM05D006209 ORTHO05D007645 3.7e-74 282.0 191 72.3
Cfa019222 Carpinus fangiana HOM05D006209 ORTHO05D007645 1.1e-73 280.4 200 70.0
QL10p006868 Quercus lobata HOM05D006209 ORTHO05D007645 1.4e-73 280.0 203 68.5
Oeu040860.1 Olea europaea HOM05D006209 ORTHO05D007645 2.4e-73 279.3 197 71.1
TWI14G0288 Tripterygium wilfordii HOM05D006209 ORTHO05D007645 3.1e-73 278.9 194 73.7
Cc04_g11480 Coffea canephora HOM05D006209 ORTHO05D007645 5.3e-73 278.1 205 70.2
Haze_07590 Corylus avellana HOM05D006209 ORTHO05D007645 5.3e-73 278.1 198 70.7
DCAR_021592 Daucus carota HOM05D006209 ORTHO05D007645 1.2e-72 276.9 196 71.9
unitig_26.g8808 Utricularia gibba HOM05D000111 ORTHO05D007645 1.2e-72 276.9 200 69.0
CsaV3_1G008850 Cucumis sativus L. HOM05D006209 ORTHO05D007645 1.5e-72 276.6 192 74.0
FvH4_5g06320 Fragaria vesca HOM05D006209 ORTHO05D007645 1.5e-72 276.6 191 72.8
Sed0008195 Sechium edule HOM05D006209 ORTHO05D007645 1.5e-72 276.6 192 73.4
THA.LOC104800398 Tarenaya hassleriana HOM05D006209 ORTHO05D007645 2.0e-72 276.2 192 72.4
THA.LOC104824986 Tarenaya hassleriana HOM05D006209 ORTHO05D007645 2.0e-72 276.2 192 72.4
MELO3C002299.2 Cucumis melo HOM05D006209 ORTHO05D007645 2.6e-72 275.8 192 73.4
HanXRQChr10g0296031 Helianthus annuus HOM05D006209 ORTHO05D007645 2.6e-72 275.8 197 69.5
MSTRG.11496 Avicennia marina HOM05D006209 ORTHO05D007645 4.5e-72 275.0 196 71.4
Nn4g22589 Nelumbo nucifera HOM05D006209 ORTHO05D007645 5.9e-72 274.6 190 71.1
Potri.012G086400 Populus trichocarpa HOM05D006209 ORTHO05D007645 2.2e-71 272.7 153 84.3
Ah.11g051190 Amaranthus hybridus HOM05D006209 ORTHO05D007645 3.8e-71 271.9 209 65.1
FAN08G2144 Fragaria x ananassa HOM05D006209 ORTHO05D007645 5.0e-71 271.6 197 71.1
FAN18G2337 Fragaria x ananassa HOM05D006209 ORTHO05D007645 5.0e-71 271.6 191 72.3
Migut.O00160 Erythranthe guttata HOM05D006209 ORTHO05D007645 8.5e-71 270.8 205 68.3
Sc12g0004970 Simmondsia chinensis HOM05D006209 ORTHO05D007645 8.5e-71 270.8 210 66.2
vmacro19294 Vaccinium macrocarpon HOM05D006209 ORTHO05D007645 1.1e-70 270.4 170 76.5
CANSAT80G1924 Cannabis sativa HOM05D006209 ORTHO05D007645 1.9e-70 269.6 192 70.8
Hma1.2p1_0046F.1_g027160 Hydrangea macrophylla HOM05D006209 ORTHO05D007645 5.5e-70 268.1 169 76.9
Sp7g22690 Schrenkiella parvula HOM05D006209 ORTHO05D007645 9.3e-70 267.3 203 67.0
Ca_16138_v3 Cicer arietinum L. HOM05D006209 ORTHO05D007645 1.2e-69 266.9 193 71.0
Ca_30305_v3 Cicer arietinum L. HOM05D006209 ORTHO05D007645 1.2e-69 266.9 193 71.0
Psat5g118240 Pisum sativum HOM05D006209 ORTHO05D007645 4.6e-69 265.0 191 69.1
CARHR232090 Cardamine hirsuta HOM05D006209 ORTHO05D007645 6.1e-69 264.6 196 66.8
Aa31LG4G9900 Aethionema arabicum HOM05D006209 ORTHO05D007645 1.3e-68 263.5 196 66.3
ECA232G4716 Erigeron canadensis HOM05D006209 ORTHO05D007645 1.8e-68 263.1 157 77.7
TPR.G25676 Trifolium pratense HOM05D006209 ORTHO05D007645 1.8e-68 263.1 177 73.4
Thhalv10025089m.g Eutrema salsugineum HOM05D006209 ORTHO05D007645 3.0e-68 262.3 197 66.0
Medtr3g076930 Medicago truncatula HOM05D006209 ORTHO05D007645 3.0e-68 262.3 182 72.5
SGA_v2.0_scaffold25G10798 Striga asiatica HOM05D006209 ORTHO05D007645 3.9e-68 261.9 224 63.4
Phvul.009G173800 Phaseolus vulgaris HOM05D006209 ORTHO05D007645 5.1e-68 261.5 192 69.8
Glyma.04G188400 Glycine max HOM05D006209 ORTHO05D007645 8.7e-68 260.8 192 70.8
Glyma.06G177400 Glycine max HOM05D006209 ORTHO05D007645 8.7e-68 260.8 192 70.8
AUR62028724 Chenopodium quinoa HOM05D006209 ORTHO05D007645 1.1e-67 260.4 159 76.1
arahy.Tifrunner.gnm1.ann1.5EQE0P Arachis hypogaea HOM05D006209 ORTHO05D007645 1.5e-67 260.0 173 71.1
AT4G24710 Arabidopsis thaliana HOM05D006209 ORTHO05D007645 2.5e-67 259.2 194 66.5
C01p20030 Brassica napus HOM05D006209 ORTHO05D007645 2.5e-67 259.2 193 68.4
Lj1g0021386 Lotus japonicus HOM05D006209 ORTHO05D007645 2.5e-67 259.2 199 66.8
BcaNung07359 Brassica carinata HOM05D006209 ORTHO05D007645 4.3e-67 258.5 200 67.0
CDE09G0716 Ceratophyllum demersum HOM05D006209 ORTHO05D007645 5.7e-67 258.1 190 67.9
arahy.Tifrunner.gnm1.ann1.S747I7 Arachis hypogaea HOM05D006209 ORTHO05D007645 7.4e-67 257.7 173 71.1
BcaC09g50838 Brassica carinata HOM05D006209 ORTHO05D007645 2.2e-66 256.1 200 66.5
BolC1t01930H Brassica oleracea HOM05D006209 ORTHO05D007645 4.8e-66 255.0 203 66.0
FAN13G2576 Fragaria x ananassa HOM05D006209 ORTHO05D007645 8.2e-66 254.2 197 68.0
Carub.0007s1635 Capsella rubella HOM05D006209 ORTHO05D007645 1.1e-65 253.8 176 70.5
A01p16040 Brassica napus HOM05D006209 ORTHO05D007645 1.4e-65 253.4 163 74.8
BraA01t01539Z Brassica rapa HOM05D006209 ORTHO05D007645 1.4e-65 253.4 202 64.9
Lsat_1_v5_gn_4_77340 Lactuca sativa HOM05D006209 ORTHO05D007645 1.4e-65 253.4 192 63.5
MBI06_g16065_MAGBIO Magnolia biondii HOM05D006209 ORTHO05D007645 2.4e-65 252.7 190 68.4
ATR0824G215 Amborella trichopoda HOM05D006209 ORTHO05D007645 9.1e-65 250.8 190 65.8
EL10Ac5g10654 Beta vulgaris HOM05D006209 ORTHO05D007645 1.2e-64 250.4 217 61.3
HPP92_008110 Vanilla planifolia HOM05D006209 ORTHO05D007645 1.5e-64 250.0 194 64.4
VMungo1309G1487 Vigna mungo HOM05D006209 ORTHO05D007645 5.0e-63 245.0 152 77.0
Dinv38524 Davidia involucrata HOM05D006209 ORTHO05D007645 4.4e-59 231.9 128 82.8
Zm00001eb424890 Zea mays HOM05D006209 ORTHO05D007645 6.3e-58 228.0 162 67.9
Rhsim08G0178000 Rhododendron simsii HOM05D006209 ORTHO05D007645 8.2e-58 227.6 227 59.0
SEGI_21694 Sequoiadendron giganteum HOM05D006209 ORTHO05D007645 3.1e-57 225.7 180 60.0
SHI17262 Sapria himalayana HOM05D000023 ORTHO05D000014 9.1e-57 224.2 141 73.8
AUR62008142 Chenopodium quinoa HOM05D006209 ORTHO05D007645 1.2e-56 223.8 207 57.5
Os04g0479000 Oryza sativa ssp. japonica HOM05D006209 ORTHO05D007645 1.3e-55 220.3 153 69.9
Eucgr.B00217 Eucalyptus grandis HOM05D006209 ORTHO05D007645 1.8e-52 209.9 128 75.8
CBR_g39421 Chara braunii HOM05D006209 ORTHO05D007645 1.3e-50 203.8 166 59.0
Mapoly0084s0055 Marchantia polymorpha HOM05D006209 ORTHO05D007645 3.3e-43 179.1 182 52.2
SMO340G0102 Selaginella moellendorffii HOM05D003563 ORTHO05D005325 1.7e-34 150.2 159 50.3
Cre02.g117150 Chlamydomonas reinhardtii HOM05D006209 ORTHO05D007645 1.5e-27 127.1 161 42.2
MCO05G067 Micromonas commoda HOM05D006209 ORTHO05D007645 9.5e-14 81.3 157 30.6
arahy.Tifrunner.gnm1.ann1.DN6VH0 Arachis hypogaea HOM05D001737 ORTHO05D001735 1.9e-06 57.0 35 65.7


User provided reference genes

Program Settings