Gene: TPR.G25676

General Information

Structural Information

  • Species Trifolium pratense
  • Gene Identifier TPR.G25676
  • Transcript Identifier TPR.T26554
  • Gene Type Coding gene
  • Location Tp57577_TGAC_v2_scaf_1297 : 6853-13173 : positive

Gene Family Information

  • ID HOM05D006209
  • #Genes/#Species 128/92
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Tp57577_TGAC_v2_mRNA26554.v2
  • id Tp57577_TGAC_v2_gene25676.v2
  • pacid 35968086
  • uniprot A0A2K3N7H5

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0042138
IEA
GOA Databasemeiotic DNA double-strand break formation
GO:0007131
IEA
GOA Databasereciprocal meiotic recombination
GO:0051026
ISO
PLAZA Integrative Orthologychiasma assembly AT4G24710
GO:0007130
ISO
PLAZA Integrative Orthologysynaptonemal complex assembly AT4G24710
GO:0007129
ISO
PLAZA Integrative Orthologyhomologous chromosome pairing at meiosis AT4G24710

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005524
IEA
GOA DatabaseATP binding
GO:0005524
IEA
InterProATP binding
GO:0016887
IEA
InterProATP hydrolysis activity
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding Os04g0479000

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005694
IEA
GOA Databasechromosome
GO:0005634
IEA
GOA Databasenucleus
GO:0000795
ISO
PLAZA Integrative Orthologysynaptonemal complex AT4G24710

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR003593 AAA+ ATPase domain
IPR003959 ATPase, AAA-type, core
IPR001270 ClpA/B family
IPR044539 Pachytene checkpoint protein 2-like
IPR027417 P-loop containing nucleoside triphosphate hydrolase
Mapman id Description
13.3.5.5.1.7 Cell cycle organisation.mitosis and meiosis.meiotic recombination.meiotic crossover.class I interference-sensitive crossover pathway.pachytene checkpoint protein (PCH2/CRC1)