Gene: unitig_26.g8808
General Information
Structural Information
- Species Utricularia gibba
- Gene Identifier unitig_26.g8808
- Transcript Identifier unitig_26.g8808.t1
- Gene Type Coding gene
- Location unitig_26 : 60717-68230 : positive
Gene Family Information
- ID HOM05D000111
- #Genes/#Species 3048/96
- Phylogenetic origin
- ID ORTHO05D007645
- #Genes/#Species 128/93
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid unitig_26.g8808.t1
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0051026 | ISO | PLAZA Integrative Orthology | chiasma assembly | AT4G24710 |
| GO:0007131 | ISO | PLAZA Integrative Orthology | reciprocal meiotic recombination | Os04g0479000 |
| GO:0007130 | ISO | PLAZA Integrative Orthology | synaptonemal complex assembly | AT4G24710 |
| GO:0007129 | ISO | PLAZA Integrative Orthology | homologous chromosome pairing at meiosis | AT4G24710 |
| GO:0042138 | ISO | PLAZA Integrative Orthology | meiotic DNA double-strand break formation | Os04g0479000 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003676 | IEA | InterPro | nucleic acid binding | |
| GO:0005524 | IEA | InterPro | ATP binding | |
| GO:0016887 | IEA | InterPro | ATP hydrolysis activity | |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | Os04g0479000 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | Os04g0479000 |
| GO:0005694 | ISO | PLAZA Integrative Orthology | chromosome | AT4G24710 |
| GO:0000795 | ISO | PLAZA Integrative Orthology | synaptonemal complex | AT4G24710 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR025521 | Neprosin activation peptide |
| IPR000504 | RNA recognition motif domain |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
| IPR035979 | RNA-binding domain superfamily |
| IPR004314 | Neprosin |
| IPR012677 | Nucleotide-binding alpha-beta plait domain superfamily |
| IPR003959 | ATPase, AAA-type, core |
| Mapman id | Description |
|---|---|
| 13.3.5.5.1.7 | Cell cycle organisation.mitosis and meiosis.meiotic recombination.meiotic crossover.class I interference-sensitive crossover pathway.pachytene checkpoint protein (PCH2/CRC1) |
| 16.11.2.2 | RNA processing.organelle machinery.plastidial mRNA stabilisation.ribonucleoprotein (CP31) |