Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc12g035940.1 Solanum lycopersicum HOM05D000216 ORTHO05D001131 1.4e-23 112.1 55 100.0
CAN.G1738.7 Capsicum annuum HOM05D000216 ORTHO05D001131 1.5e-17 92.0 51 86.3
CAN.G892.2 Capsicum annuum HOM05D000216 ORTHO05D001131 1.5e-17 92.0 51 86.3
CAN.G939.17 Capsicum annuum HOM05D000216 ORTHO05D001131 1.5e-17 92.0 51 86.3
Medtr0002s0510 Medicago truncatula HOM05D000216 ORTHO05D001131 2.5e-17 91.3 50 86.0
Hma1.2p1_0094F.1_g047108 Hydrangea macrophylla HOM05D000216 ORTHO05D001131 3.3e-17 90.9 51 84.3
Nn020s41502 Nelumbo nucifera HOM05D000216 ORTHO05D001131 3.3e-17 90.9 51 84.3
Nn082s42674 Nelumbo nucifera HOM05D000216 ORTHO05D001131 3.3e-17 90.9 51 84.3
PSO548G0026 Papaver somniferum HOM05D000216 ORTHO05D001131 3.3e-17 90.9 51 84.3
LjContig00489g0016354 Lotus japonicus HOM05D000216 ORTHO05D001131 4.3e-17 90.5 51 84.3
Sc13g0006970 Simmondsia chinensis HOM05D000216 ORTHO05D001131 4.3e-17 90.5 51 82.4
Sc15g0001760 Simmondsia chinensis HOM05D000216 ORTHO05D001131 4.3e-17 90.5 51 82.4
Sc25g0001960 Simmondsia chinensis HOM05D000216 ORTHO05D001131 4.3e-17 90.5 51 82.4
Ah.01g011550 Amaranthus hybridus HOM05D000216 ORTHO05D001131 7.4e-17 89.7 51 82.4
Ah.09g227320 Amaranthus hybridus HOM05D000216 ORTHO05D001131 7.4e-17 89.7 51 82.4
Ah.10g027590 Amaranthus hybridus HOM05D000216 ORTHO05D001131 7.4e-17 89.7 51 82.4
CsaV3_UNG208330 Cucumis sativus L. HOM05D000216 ORTHO05D001131 7.4e-17 89.7 51 82.4
DCAR_032476 Daucus carota HOM05D000216 ORTHO05D001131 7.4e-17 89.7 51 82.4
PGR111G0080 Punica granatum HOM05D000216 ORTHO05D001131 7.4e-17 89.7 51 82.4
Sed0007596 Sechium edule HOM05D000216 ORTHO05D001131 7.4e-17 89.7 51 82.4
EL10As12g24016 Beta vulgaris HOM05D000216 ORTHO05D001131 1.3e-16 89.0 51 82.4
EL10As4g23395 Beta vulgaris HOM05D000216 ORTHO05D001131 1.3e-16 89.0 51 82.4
Sed0002232 Sechium edule HOM05D000216 ORTHO05D001131 1.3e-16 89.0 50 84.0
RcHm_v2.0_CPg0502401 Rosa chinensis HOM05D000216 ORTHO05D001131 2.1e-16 88.2 51 82.4
SGA_v2.0_scaffold119G32686 Striga asiatica HOM05D000216 ORTHO05D001131 2.1e-16 88.2 51 82.4
unitig_91.g26498 Utricularia gibba HOM05D000216 ORTHO05D001131 2.1e-16 88.2 51 80.4
Migut.D01344 Erythranthe guttata HOM05D000216 ORTHO05D001131 2.8e-16 87.8 49 85.7
Gohir.D05G027450 Gossypium hirsutum HOM05D000216 ORTHO05D001131 2.8e-16 87.8 52 78.8
Gorai.009G027600 Gossypium raimondii HOM05D000216 ORTHO05D001131 2.8e-16 87.8 52 78.8
AL2G20930 Arabidopsis lyrata HOM05D000216 ORTHO05D001131 3.7e-16 87.4 51 78.4
ATCG00190 Arabidopsis thaliana HOM05D000216 ORTHO05D001131 3.7e-16 87.4 51 78.4
BNapus_Darmor_BZH_scaffold_253p00080 Brassica napus HOM05D000216 ORTHO05D001131 3.7e-16 87.4 51 78.4
BolSC45t60940H Brassica oleracea HOM05D000216 ORTHO05D001131 3.7e-16 87.4 51 78.4
BolSC49t61196H Brassica oleracea HOM05D000216 ORTHO05D001131 3.7e-16 87.4 51 78.4
CARHR281930 Cardamine hirsuta HOM05D000216 ORTHO05D001131 3.7e-16 87.4 51 78.4
Lalb_Chr09g0335411 Lupinus albus HOM05D000216 ORTHO05D001131 3.7e-16 87.4 51 80.4
BraSC140t45600Z Brassica rapa HOM05D000216 ORTHO05D001131 4.8e-16 87.0 51 78.4
BraSC140t45606Z Brassica rapa HOM05D000216 ORTHO05D001131 4.8e-16 87.0 51 78.4
BraSC151t45705Z Brassica rapa HOM05D000216 ORTHO05D001131 4.8e-16 87.0 51 78.4
BraSC58t46479Z Brassica rapa HOM05D000216 ORTHO05D001131 4.8e-16 87.0 51 78.4
Lj2A1238G119 Lonicera japonica HOM05D000216 ORTHO05D001131 4.8e-16 87.0 51 82.4
Lj2C1237G9 Lonicera japonica HOM05D000216 ORTHO05D001131 4.8e-16 87.0 51 82.4
arahy.Tifrunner.gnm1.ann1.MIWC4Y Arachis hypogaea HOM05D000216 ORTHO05D001131 6.2e-16 86.7 51 80.4
CAN.G219.20 Capsicum annuum HOM05D000216 ORTHO05D001131 1.1e-15 85.9 52 80.8
Hund08566 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.1e-15 85.9 51 78.4
Hund18042 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.1e-15 85.9 51 78.4
Hund19314 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.1e-15 85.9 51 78.4
Hund23975 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.1e-15 85.9 51 78.4
Hund25935 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.1e-15 85.9 51 78.4
Hund27452 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.1e-15 85.9 51 78.4
Hund27562 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.1e-15 85.9 51 78.4
Hund27608 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.1e-15 85.9 51 78.4
Hund27642 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.1e-15 85.9 51 78.4
Hund27656 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.1e-15 85.9 51 78.4
Hund27670 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.1e-15 85.9 51 78.4
Hund27699 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.1e-15 85.9 51 78.4
Hund27744 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.1e-15 85.9 51 78.4
Hund27763 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.1e-15 85.9 51 78.4
Hund27805 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.1e-15 85.9 51 78.4
Hund27822 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.1e-15 85.9 51 78.4
Hund27840 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.1e-15 85.9 51 78.4
Hund27867 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.1e-15 85.9 51 78.4
Hund27916 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.1e-15 85.9 51 78.4
Hund27998 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.1e-15 85.9 51 78.4
Hund28018 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.1e-15 85.9 51 78.4
Hund28026 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.1e-15 85.9 51 78.4
Hund28058 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.1e-15 85.9 51 78.4
Hund28123 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.1e-15 85.9 51 78.4
Hund28131 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.1e-15 85.9 51 78.4
Hund28139 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.1e-15 85.9 51 78.4
Hund28154 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.1e-15 85.9 51 78.4
Hund28163 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.1e-15 85.9 51 78.4
Hund28189 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.1e-15 85.9 51 78.4
Hund28208 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.1e-15 85.9 51 78.4
Hund28237 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.1e-15 85.9 51 78.4
Hund28247 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.1e-15 85.9 51 78.4
Hund28260 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.1e-15 85.9 51 78.4
Hund28336 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.1e-15 85.9 51 78.4
Hund28351 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.1e-15 85.9 51 78.4
Hund28353 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.1e-15 85.9 51 78.4
Hund28385 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.1e-15 85.9 51 78.4
Hund28398 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.1e-15 85.9 51 78.4
Hund28500 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.1e-15 85.9 51 78.4
Hund28578 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.1e-15 85.9 51 78.4
Hund28618 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.1e-15 85.9 51 78.4
Hund28642 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.1e-15 85.9 51 78.4
Hund28686 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.1e-15 85.9 51 78.4
Hund28697 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.1e-15 85.9 51 78.4
Hund28702 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.1e-15 85.9 51 78.4
Hund28806 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.1e-15 85.9 51 78.4
Hund28824 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.1e-15 85.9 51 78.4
Hund28904 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.1e-15 85.9 51 78.4
Hund28914 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.1e-15 85.9 51 78.4
Hund28984 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.1e-15 85.9 51 78.4
Hund29113 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.1e-15 85.9 51 78.4
Hund29197 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.1e-15 85.9 51 78.4
Hund29207 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.1e-15 85.9 51 78.4
Hund29354 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.1e-15 85.9 51 78.4
Hund29389 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.1e-15 85.9 51 78.4
Hund29478 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.1e-15 85.9 51 78.4
Hund29486 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.1e-15 85.9 51 78.4
Hund29645 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.1e-15 85.9 51 78.4
Hund29745 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.1e-15 85.9 51 78.4
Hund30018 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.1e-15 85.9 51 78.4
Hund30063 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.1e-15 85.9 51 78.4
Potri.013G142232 Populus trichocarpa HOM05D000216 ORTHO05D001131 1.4e-15 85.5 51 78.4
SabraPtG0001100 Salix brachista HOM05D000216 ORTHO05D001131 1.8e-15 85.1 51 78.4
Oeu012828.1 Olea europaea HOM05D000216 ORTHO05D001131 2.4e-15 84.7 52 80.8
ClCG10G008040 Citrullus lanatus HOM05D000216 ORTHO05D013308 3.1e-15 84.3 49 81.6
VMungo1015G0001 Vigna mungo HOM05D000216 ORTHO05D001131 4.0e-15 84.0 51 78.4
Gorai.011G273200 Gossypium raimondii HOM05D000216 ORTHO05D001131 6.9e-15 83.2 52 75.0
HanXRQCPg0579801 Helianthus annuus HOM05D000216 ORTHO05D001131 6.9e-15 83.2 51 78.4
Lsat_1_v5_gn_1_118620 Lactuca sativa HOM05D000216 ORTHO05D001131 2.0e-14 81.6 51 76.5
Lsat_1_v5_gn_1_92840 Lactuca sativa HOM05D000216 ORTHO05D001131 2.0e-14 81.6 51 76.5
LjContig00318g0016482 Lotus japonicus HOM05D000216 ORTHO05D001131 2.0e-14 81.6 50 76.0
Gorai.008G086500 Gossypium raimondii HOM05D000216 ORTHO05D001131 1.0e-13 79.3 55 70.9
Psat0s6357g0040 Pisum sativum HOM05D000216 ORTHO05D001131 1.3e-13 79.0 50 74.0
Psat3g186440 Pisum sativum HOM05D000216 ORTHO05D001131 1.3e-13 79.0 50 74.0
Psat7g199200 Pisum sativum HOM05D000216 ORTHO05D001131 1.3e-13 79.0 50 74.0
Sed0025233 Sechium edule HOM05D000216 ORTHO05D001131 2.9e-13 77.8 45 80.0
Medtr4g051130 Medicago truncatula HOM05D000216 ORTHO05D001131 3.8e-13 77.4 50 72.0
ClCG01G011250 Citrullus lanatus HOM05D000216 ORTHO05D001131 9.3e-12 72.8 49 71.4
Nitab4.5_0007104g0040 Nicotiana tabacum HOM05D000216 ORTHO05D001131 4.6e-11 70.5 42 81.0
Gohir.D02G042933 Gossypium hirsutum HOM05D000216 ORTHO05D001131 1.8e-10 68.6 51 68.6
Thecc.07G188500 Theobroma cacao HOM05D000216 ORTHO05D001131 1.8e-10 68.6 40 80.0
HanXRQChr05g0139701 Helianthus annuus HOM05D000216 ORTHO05D001131 3.9e-10 67.4 45 73.3
Migut.H02461 Erythranthe guttata HOM05D000216 ORTHO05D001131 2.2e-08 61.6 47 68.1
CAN.G1648.7 Capsicum annuum HOM05D000216 ORTHO05D001131 3.7e-08 60.8 30 93.3
HanXRQChr11g0340031 Helianthus annuus HOM05D000216 ORTHO05D001131 6.3e-08 60.1 37 78.4
ClCG05G015590 Citrullus lanatus HOM05D000216 ORTHO05D013308 1.2e-06 55.8 26 96.2
Gohir.D01G029500 Gossypium hirsutum HOM05D000216 ORTHO05D001131 2.0e-06 55.1 27 92.6
Migut.D01417 Erythranthe guttata HOM05D000216 ORTHO05D001131 1.0e-05 52.8 33 75.8
GSVIVG01035251001 Vitis vinifera HOM05D000216 ORTHO05D001131 1.0e-05 52.8 33 72.7


User provided reference genes

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