Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc07g040780.4 Solanum lycopersicum HOM05D006688 ORTHO05D008550 2.3e-60 235.3 115 100.0
Sopen07g019540 Solanum pennellii HOM05D006688 ORTHO05D008550 3.2e-54 214.9 152 75.0
Nitab4.5_0001519g0100 Nicotiana tabacum HOM05D006688 ORTHO05D008550 1.3e-42 176.4 139 66.9
Peaxi162Scf00494g00088 Petunia axillaris HOM05D006688 ORTHO05D008550 3.6e-42 174.9 141 64.5
CSS0016517 Camellia sinensis var. sinensis HOM05D006688 ORTHO05D008550 1.9e-38 162.5 140 57.1
TWI32G0460 Tripterygium wilfordii HOM05D006688 ORTHO05D008550 3.2e-38 161.8 105 67.6
TAR636G2732 Trochodendron aralioides HOM05D006688 ORTHO05D008550 5.1e-36 154.5 142 54.9
MSTRG.10542 Avicennia marina HOM05D006688 ORTHO05D008550 6.7e-36 154.1 142 55.6
Dinv42341 Davidia involucrata HOM05D006688 ORTHO05D008550 8.7e-36 153.7 139 55.4
Nitab4.5_0003606g0020 Nicotiana tabacum HOM05D006688 ORTHO05D008550 1.1e-35 153.3 131 63.4
Lj7C679G14 Lonicera japonica HOM05D006688 ORTHO05D008550 1.5e-35 152.9 139 56.1
GSVIVG01015172001 Vitis vinifera HOM05D006688 ORTHO05D008550 3.3e-35 151.8 140 55.7
vmacro06303 Vaccinium macrocarpon HOM05D006688 ORTHO05D008550 2.1e-34 149.1 139 54.7
DCAR_010507 Daucus carota HOM05D006688 ORTHO05D008550 4.8e-34 147.9 140 52.9
MBI04_g35655_MAGBIO Magnolia biondii HOM05D006688 ORTHO05D008550 4.8e-34 147.9 135 51.1
Actinidia38457 Actinidia chinensis HOM05D006688 ORTHO05D008550 1.1e-33 146.7 137 54.0
CsaV3_1G040620 Cucumis sativus L. HOM05D006688 ORTHO05D008550 1.4e-33 146.4 140 51.4
MD02G1082800 Malus domestica HOM05D006688 ORTHO05D008550 1.4e-33 146.4 142 52.8
Atru.chr7.1629 Acer truncatum HOM05D006688 ORTHO05D008550 1.8e-33 146.0 142 52.1
MELO3C015492.2 Cucumis melo HOM05D006688 ORTHO05D008550 1.8e-33 146.0 140 50.7
Lj7A540G53 Lonicera japonica HOM05D006688 ORTHO05D008550 3.1e-33 145.2 116 62.1
Gohir.A06G073600 Gossypium hirsutum HOM05D006688 ORTHO05D008550 4.0e-33 144.8 138 52.9
Gohir.D06G072500 Gossypium hirsutum HOM05D006688 ORTHO05D008550 2.0e-32 142.5 138 52.2
Gorai.010G084500 Gossypium raimondii HOM05D006688 ORTHO05D008550 2.0e-32 142.5 138 52.2
Prupe.7G205900 Prunus persica HOM05D006688 ORTHO05D008550 2.6e-32 142.1 142 51.4
Rhsim03G0231200 Rhododendron simsii HOM05D006688 ORTHO05D008550 2.6e-32 142.1 139 53.2
Ciclev10009613m.g Citrus clementina HOM05D006688 ORTHO05D008550 3.4e-32 141.7 142 50.0
Thecc.09G085200 Theobroma cacao HOM05D006688 ORTHO05D008550 3.4e-32 141.7 137 52.6
Haze_25940 Corylus avellana HOM05D006688 ORTHO05D008550 4.5e-32 141.4 140 50.0
Eucgr.C03417 Eucalyptus grandis HOM05D006688 ORTHO05D008550 4.5e-32 141.4 140 51.4
CiPaw.03G212300 Carya illinoinensis HOM05D006688 ORTHO05D008550 7.6e-32 140.6 142 50.0
Lsat_1_v5_gn_5_143161 Lactuca sativa HOM05D006688 ORTHO05D008550 7.6e-32 140.6 140 47.1
COL.COLO4_18173 Corchorus olitorius HOM05D006688 ORTHO05D008550 1.0e-31 140.2 138 50.7
ECA232G4161 Erigeron canadensis HOM05D006688 ORTHO05D008550 1.0e-31 140.2 140 48.6
Cc06_g11640 Coffea canephora HOM05D006688 ORTHO05D008550 1.3e-31 139.8 142 48.6
Manes.03G036200 Manihot esculenta HOM05D006688 ORTHO05D008550 1.3e-31 139.8 142 50.0
Potri.007G001500 Populus trichocarpa HOM05D006688 ORTHO05D008550 1.7e-31 139.4 142 50.0
Oeu000312.2 Olea europaea HOM05D006688 ORTHO05D008550 2.9e-31 138.7 138 53.6
Migut.L01521 Erythranthe guttata HOM05D006688 ORTHO05D008550 4.9e-31 137.9 142 50.7
QL02p062093 Quercus lobata HOM05D006688 ORTHO05D008550 6.5e-31 137.5 138 50.7
HanXRQChr10g0319491 Helianthus annuus HOM05D006688 ORTHO05D008550 1.9e-30 136.0 138 48.6
MD15G1210900 Malus domestica HOM05D006688 ORTHO05D008550 5.5e-30 134.4 142 49.3
Medtr4g125950 Medicago truncatula HOM05D006688 ORTHO05D008550 5.5e-30 134.4 142 47.9
RcHm_v2.0_Chr2g0093801 Rosa chinensis HOM05D006688 ORTHO05D008550 7.1e-30 134.0 142 50.0
unitig_578.g16412 Utricularia gibba HOM05D006688 ORTHO05D008550 9.3e-30 133.7 141 49.6
Glyma.13G106300 Glycine max HOM05D006688 ORTHO05D008550 1.2e-29 133.3 142 47.2
Sc08g0008600 Simmondsia chinensis HOM05D006688 ORTHO05D008550 1.2e-29 133.3 142 47.2
Sed0022183 Sechium edule HOM05D006688 ORTHO05D008550 1.6e-29 132.9 140 47.9
Aqoxy7G01159 Aquilegia oxysepala HOM05D006688 ORTHO05D008550 2.1e-29 132.5 141 46.8
Glyma.17G053100 Glycine max HOM05D006688 ORTHO05D008550 2.1e-29 132.5 140 47.1
Hma1.2p1_0672F.1_g201000 Hydrangea macrophylla HOM05D006688 ORTHO05D008550 2.7e-29 132.1 133 51.1
EL10Ac8g19177 Beta vulgaris HOM05D006688 ORTHO05D008550 3.5e-29 131.7 142 48.6
FvH4_1g07921 Fragaria vesca HOM05D006688 ORTHO05D008550 3.5e-29 131.7 140 49.3
PGR004G0903 Punica granatum HOM05D006688 ORTHO05D008550 3.5e-29 131.7 140 47.9
TPR.G9451 Trifolium pratense HOM05D006688 ORTHO05D008550 3.5e-29 131.7 140 47.1
Sabra07G0001100 Salix brachista HOM05D006688 ORTHO05D008550 4.6e-29 131.3 174 42.0
SGA_v2.0_scaffold23G10037 Striga asiatica HOM05D006688 ORTHO05D008550 4.6e-29 131.3 141 49.6
arahy.Tifrunner.gnm1.ann1.UP5FVB Arachis hypogaea HOM05D006688 ORTHO05D008550 6.0e-29 131.0 140 45.7
arahy.Tifrunner.gnm1.ann1.XSA7KG Arachis hypogaea HOM05D006688 ORTHO05D008550 7.9e-29 130.6 140 45.7
Lj4g0022709 Lotus japonicus HOM05D006688 ORTHO05D008550 7.9e-29 130.6 140 47.9
VMungo1215G1360 Vigna mungo HOM05D006688 ORTHO05D008550 7.9e-29 130.6 139 47.5
FAN26G2887 Fragaria x ananassa HOM05D006688 ORTHO05D008550 1.3e-28 129.8 140 49.3
FAN26G0248 Fragaria x ananassa HOM05D006688 ORTHO05D008550 1.8e-28 129.4 140 48.6
FAN28G0979 Fragaria x ananassa HOM05D006688 ORTHO05D008550 1.8e-28 129.4 140 48.6
Phvul.003G134700 Phaseolus vulgaris HOM05D006688 ORTHO05D008550 5.1e-28 127.9 139 46.0
Ca_21292_v3 Cicer arietinum L. HOM05D006688 ORTHO05D008550 3.3e-27 125.2 135 47.4
Ah.09g228060 Amaranthus hybridus HOM05D006688 ORTHO05D008550 7.4e-27 124.0 142 47.2
FAN19G1103 Fragaria x ananassa HOM05D006688 ORTHO05D008550 7.4e-27 124.0 136 49.3
SalBow1G2294 Salvia bowleyana HOM05D006688 ORTHO05D008550 1.3e-26 123.2 165 41.8
Hund06662 Selenicereus undatus HOM05D006688 ORTHO05D008550 2.1e-26 122.5 142 47.2
arahy.Tifrunner.gnm1.ann1.LNAK8N Arachis hypogaea HOM05D006688 ORTHO05D008550 8.2e-26 120.6 132 46.2
AUR62029033 Chenopodium quinoa HOM05D006688 ORTHO05D008550 8.2e-26 120.6 142 47.2
AL3G48850 Arabidopsis lyrata HOM05D006688 ORTHO05D008550 1.1e-25 120.2 138 48.6
CARHR109870 Cardamine hirsuta HOM05D006688 ORTHO05D008550 1.4e-25 119.8 138 47.8
Lalb_Chr20g0118781 Lupinus albus HOM05D006688 ORTHO05D008550 1.4e-25 119.8 136 46.3
A07p01330 Brassica napus HOM05D006688 ORTHO05D008550 2.4e-25 119.0 138 47.1
BraA07t27924Z Brassica rapa HOM05D006688 ORTHO05D008550 2.4e-25 119.0 138 47.1
AT2G19430 Arabidopsis thaliana HOM05D006688 ORTHO05D008550 3.1e-25 118.6 138 49.3
HPP92_007651 Vanilla planifolia HOM05D006688 ORTHO05D008550 4.1e-25 118.2 141 44.7
BcaC06g36575 Brassica carinata HOM05D006688 ORTHO05D008550 6.9e-25 117.5 138 46.4
C07p02720 Brassica napus HOM05D006688 ORTHO05D008550 6.9e-25 117.5 138 46.4
BolC7t40672H Brassica oleracea HOM05D006688 ORTHO05D008550 6.9e-25 117.5 138 46.4
Carub.0003s3371 Capsella rubella HOM05D006688 ORTHO05D008550 6.9e-25 117.5 138 47.8
BcaB03g16729 Brassica carinata HOM05D006688 ORTHO05D008550 9.0e-25 117.1 137 47.4
Sp3g32810 Schrenkiella parvula HOM05D006688 ORTHO05D008550 5.9e-24 114.4 136 47.1
Thhalv10022744m.g Eutrema salsugineum HOM05D006688 ORTHO05D008550 1.0e-23 113.6 138 45.7
Aa31LG8G16440 Aethionema arabicum HOM05D006688 ORTHO05D008550 1.4e-22 109.8 138 44.9
PSO063G5109 Papaver somniferum HOM05D006688 ORTHO05D008550 1.9e-22 109.4 67 74.6
AUR62033933 Chenopodium quinoa HOM05D006688 ORTHO05D008550 2.5e-22 109.0 171 39.8
PSO782G0729 Papaver somniferum HOM05D006688 ORTHO05D008550 2.5e-22 109.0 67 74.6
Zm00001eb310980 Zea mays HOM05D006688 ORTHO05D008550 3.2e-22 108.6 137 41.6
THA.LOC104814631 Tarenaya hassleriana HOM05D006688 ORTHO05D008550 1.2e-21 106.7 138 43.5
MBI04_g12191_MAGBIO Magnolia biondii HOM05D006688 ORTHO05D008550 3.5e-21 105.1 119 45.4
ClCG03G015420 Citrullus lanatus HOM05D006688 ORTHO05D008550 7.9e-21 104.0 115 47.0
Nn8g38791 Nelumbo nucifera HOM05D006688 ORTHO05D008550 3.9e-20 101.7 105 52.4
Duzib150G1545 Durio zibethinus HOM05D006688 ORTHO05D000625 1.5e-19 99.8 112 46.4
Cfa003056 Carpinus fangiana HOM05D006688 ORTHO05D000625 2.5e-19 99.0 114 45.6
Mapoly0100s0025 Marchantia polymorpha HOM05D006688 ORTHO05D008550 5.7e-19 97.8 135 39.3
Duzib168G0254 Durio zibethinus HOM05D006688 ORTHO05D008550 7.4e-19 97.4 64 67.2
FAN23G3127 Fragaria x ananassa HOM05D006688 ORTHO05D008550 2.0e-16 89.4 140 39.3
Cpa.g.sc28.145 Carica papaya HOM05D006688 ORTHO05D008550 5.5e-14 81.3 113 39.8
CDE04G2495 Ceratophyllum demersum HOM05D006688 ORTHO05D008550 2.7e-13 79.0 114 38.6
ATR0789G107 Amborella trichopoda HOM05D006688 ORTHO05D008550 2.0e-11 72.8 114 36.0
MCO14G146 Micromonas commoda HOM05D006688 ORTHO05D008550 1.2e-08 63.5 144 29.2
Psat7g043880 Pisum sativum HOM05D006688 ORTHO05D008550 9.4e-06 53.9 42 57.1


User provided reference genes

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