Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc06g066780.3 Solanum lycopersicum HOM05D007289 ORTHO05D009215 2.0e-217 758.8 385 100.0
Sopen06g025060 Solanum pennellii HOM05D007289 ORTHO05D009215 5.4e-215 750.7 385 98.7
PGSC0003DMG400016511 Solanum tuberosum HOM05D007289 ORTHO05D009215 4.1e-207 724.5 385 94.8
CAN.G395.19 Capsicum annuum HOM05D007289 ORTHO05D009215 1.1e-167 593.6 385 80.5
Nitab4.5_0002327g0060 Nicotiana tabacum HOM05D007289 ORTHO05D009215 1.6e-155 553.1 375 77.3
Peaxi162Scf00207g00834 Petunia axillaris HOM05D007289 ORTHO05D009215 4.5e-145 518.5 306 83.0
MD17G1197800 Malus domestica HOM05D007289 ORTHO05D009215 5.2e-109 398.7 389 58.9
Dinv30529 Davidia involucrata HOM05D007289 ORTHO05D009215 2.6e-108 396.4 392 56.6
CSS0039074 Camellia sinensis var. sinensis HOM05D007289 ORTHO05D009215 3.4e-108 396.0 384 58.3
Prupe.3G073900 Prunus persica HOM05D007289 ORTHO05D009215 7.5e-108 394.8 382 58.1
Cc04_g03590 Coffea canephora HOM05D007289 ORTHO05D009215 9.8e-108 394.4 382 58.1
MSTRG.11091 Avicennia marina HOM05D007289 ORTHO05D009215 3.5e-105 386.0 386 55.2
Oeu033497.1 Olea europaea HOM05D007289 ORTHO05D009215 1.7e-104 383.6 364 58.0
Ciclev10025766m.g Citrus clementina HOM05D007289 ORTHO05D009215 6.6e-104 381.7 386 55.2
Lj9C506T12 Lonicera japonica HOM05D007289 ORTHO05D009215 6.6e-104 381.7 405 53.3
vmacro18934 Vaccinium macrocarpon HOM05D007289 ORTHO05D009215 2.5e-103 379.8 382 56.5
Migut.I00845 Erythranthe guttata HOM05D007289 ORTHO05D009215 1.6e-102 377.1 369 54.5
RcHm_v2.0_Chr2g0137421 Rosa chinensis HOM05D007289 ORTHO05D009215 1.1e-101 374.4 387 54.0
FvH4_6g30910 Fragaria vesca HOM05D007289 ORTHO05D009215 3.1e-101 372.9 383 55.1
Rhsim08G0218600 Rhododendron simsii HOM05D007289 ORTHO05D009215 4.0e-101 372.5 400 53.0
TAR383G0594 Trochodendron aralioides HOM05D007289 ORTHO05D009215 1.2e-100 370.9 392 54.8
FAN02G0535 Fragaria x ananassa HOM05D007289 ORTHO05D009215 3.4e-100 369.4 380 54.2
Manes.04G121300 Manihot esculenta HOM05D007289 ORTHO05D009215 4.9e-99 365.5 377 54.1
PSO782G0119 Papaver somniferum HOM05D007289 ORTHO05D009215 1.4e-98 364.0 370 54.6
Potri.001G178100 Populus trichocarpa HOM05D007289 ORTHO05D009215 7.8e-97 358.2 369 52.6
Gorai.002G058300 Gossypium raimondii HOM05D007289 ORTHO05D009215 1.3e-96 357.5 370 56.2
Lj3g0010801 Lotus japonicus HOM05D007289 ORTHO05D009215 3.0e-96 356.3 393 50.9
Lalb_Chr14g0373531 Lupinus albus HOM05D007289 ORTHO05D009215 5.0e-96 355.5 372 52.4
PGR102G0666 Punica granatum HOM05D007289 ORTHO05D009215 5.0e-96 355.5 381 54.1
Thecc.06G082700 Theobroma cacao HOM05D007289 ORTHO05D009215 6.6e-96 355.1 368 55.2
Sabra01G0148500 Salix brachista HOM05D007289 ORTHO05D009215 2.5e-95 353.2 377 50.9
Gohir.A02G122500 Gossypium hirsutum HOM05D007289 ORTHO05D009215 3.3e-95 352.8 365 56.4
Atru.chr1.3224 Acer truncatum HOM05D007289 ORTHO05D009215 7.3e-95 351.7 385 51.2
CANSAT56G1700 Cannabis sativa HOM05D007289 ORTHO05D009215 7.3e-95 351.7 385 51.2
Ca_01106_v3 Cicer arietinum L. HOM05D007289 ORTHO05D009215 1.6e-94 350.5 377 52.3
Lalb_Chr22g0351171 Lupinus albus HOM05D007289 ORTHO05D009215 1.6e-94 350.5 378 52.6
COL.COLO4_30328 Corchorus olitorius HOM05D007289 ORTHO05D009215 4.7e-94 349.0 382 53.7
Aqoxy7G01850 Aquilegia oxysepala HOM05D007289 ORTHO05D009215 6.2e-94 348.6 394 49.5
arahy.Tifrunner.gnm1.ann1.UJ7D22 Arachis hypogaea HOM05D007289 ORTHO05D009215 1.1e-93 347.8 378 51.1
TWI75G1369 Tripterygium wilfordii HOM05D007289 ORTHO05D009215 3.1e-93 346.3 372 52.7
arahy.Tifrunner.gnm1.ann1.HRS6MU Arachis hypogaea HOM05D007289 ORTHO05D009215 4.0e-93 345.9 378 51.3
Phvul.005G172600 Phaseolus vulgaris HOM05D007289 ORTHO05D009215 4.0e-93 345.9 386 51.8
Psat5g299280 Pisum sativum HOM05D007289 ORTHO05D009215 4.0e-93 345.9 376 52.1
VMungo1080G1522 Vigna mungo HOM05D007289 ORTHO05D009215 4.0e-93 345.9 384 49.5
DCAR_016227 Daucus carota HOM05D007289 ORTHO05D009215 6.8e-93 345.1 379 51.2
QL05p025382 Quercus lobata HOM05D007289 ORTHO05D009215 1.5e-92 344.0 382 52.6
CiPaw.02G152300 Carya illinoinensis HOM05D007289 ORTHO05D009215 2.0e-92 343.6 369 53.1
Hund06601 Selenicereus undatus HOM05D007289 ORTHO05D009215 2.0e-92 343.6 395 50.1
Glyma.13G360800 Glycine max HOM05D007289 ORTHO05D009215 2.6e-92 343.2 377 50.7
TPR.G37243 Trifolium pratense HOM05D007289 ORTHO05D009215 2.6e-92 343.2 373 51.2
THA.LOC104808206 Tarenaya hassleriana HOM05D007289 ORTHO05D009215 3.4e-92 342.8 381 52.0
Cfa002049 Carpinus fangiana HOM05D007289 ORTHO05D009215 7.5e-92 341.7 380 50.0
Aa31LG4G690 Aethionema arabicum HOM05D007289 ORTHO05D009215 1.3e-91 340.9 382 50.8
GSVIVG01017153001 Vitis vinifera HOM05D007289 ORTHO05D009215 1.3e-91 340.9 334 56.3
CARHR074820 Cardamine hirsuta HOM05D007289 ORTHO05D009215 2.9e-91 339.7 369 52.8
Thhalv10018735m.g Eutrema salsugineum HOM05D007289 ORTHO05D009215 2.9e-91 339.7 377 52.0
CsaV3_7G033000 Cucumis sativus L. HOM05D007289 ORTHO05D009215 3.7e-91 339.3 382 51.3
AL2G41080 Arabidopsis lyrata HOM05D007289 ORTHO05D009215 4.9e-91 339.0 366 50.8
AUR62011614 Chenopodium quinoa HOM05D007289 ORTHO05D009215 4.9e-91 339.0 394 48.7
MELO3C023367.2 Cucumis melo HOM05D007289 ORTHO05D009215 4.9e-91 339.0 383 52.0
ECA232G0523 Erigeron canadensis HOM05D007289 ORTHO05D009215 4.9e-91 339.0 384 51.0
AUR62016430 Chenopodium quinoa HOM05D007289 ORTHO05D009215 6.4e-91 338.6 394 48.7
Sed0021795 Sechium edule HOM05D007289 ORTHO05D009215 9.2e-90 334.7 381 51.2
HanXRQChr16g0501051 Helianthus annuus HOM05D007289 ORTHO05D009215 1.6e-89 334.0 376 49.2
Medtr2g102430 Medicago truncatula HOM05D007289 ORTHO05D009215 1.6e-89 334.0 369 52.0
Lsat_1_v5_gn_4_103480 Lactuca sativa HOM05D007289 ORTHO05D009215 2.7e-89 333.2 386 50.3
Sc12g0009160 Simmondsia chinensis HOM05D007289 ORTHO05D009215 2.7e-89 333.2 389 49.4
AT1G80420 Arabidopsis thaliana HOM05D007289 ORTHO05D009215 4.6e-89 332.4 370 51.4
Sp5g35390 Schrenkiella parvula HOM05D007289 ORTHO05D009215 1.3e-88 330.9 370 51.6
Os06g0144000 Oryza sativa ssp. japonica HOM05D007289 ORTHO05D009215 1.7e-88 330.5 369 49.1
MBI04_g26647_MAGBIO Magnolia biondii HOM05D007289 ORTHO05D009215 1.1e-87 327.8 355 50.7
Carub.0002s2715 Capsella rubella HOM05D007289 ORTHO05D009215 1.9e-87 327.0 377 50.7
Nitab4.5_0021849g0010 Nicotiana tabacum HOM05D007289 ORTHO05D009215 5.6e-87 325.5 203 80.3
BolC2t09743H Brassica oleracea HOM05D007289 ORTHO05D009215 1.8e-85 320.5 369 49.6
FAN09G0173 Fragaria x ananassa HOM05D007289 ORTHO05D009215 1.8e-85 320.5 362 51.1
BcaC03g15968 Brassica carinata HOM05D007289 ORTHO05D009215 3.1e-85 319.7 369 49.9
C02p37330 Brassica napus HOM05D007289 ORTHO05D009215 4.0e-85 319.3 369 49.9
BcaB05g25270 Brassica carinata HOM05D002927 ORTHO05D003841 1.3e-83 314.3 371 48.8
SalBow2G1977 Salvia bowleyana HOM05D007289 ORTHO05D009215 2.2e-83 313.5 373 47.7
Actinidia15825 Actinidia chinensis HOM05D002927 ORTHO05D003841 3.8e-83 312.8 315 56.8
A02p23560 Brassica napus HOM05D007289 ORTHO05D009215 8.4e-83 311.6 371 48.8
BraA02t07349Z Brassica rapa HOM05D007289 ORTHO05D009215 8.4e-83 311.6 371 48.8
Duzib235G0864 Durio zibethinus HOM05D007289 ORTHO05D009215 1.1e-79 301.2 360 50.6
EL10Ac9g21988 Beta vulgaris HOM05D007289 ORTHO05D009215 1.2e-78 297.7 456 41.2
PSO339G0085 Papaver somniferum HOM05D007289 ORTHO05D009215 6.4e-75 285.4 274 54.0
Nn8g39279 Nelumbo nucifera HOM05D007289 ORTHO05D009215 2.4e-74 283.5 385 46.8
ATR0037G063 Amborella trichopoda HOM05D007289 ORTHO05D009215 3.5e-73 279.6 404 42.3
CDE02G4373 Ceratophyllum demersum HOM05D004733 ORTHO05D005925 1.7e-72 277.3 407 41.5
SEGI_14605 Sequoiadendron giganteum HOM05D007289 ORTHO05D009215 4.6e-65 252.7 331 42.0
Haze_16457 Corylus avellana HOM05D007289 ORTHO05D009215 4.8e-62 242.7 573 31.9
Cpa.g.sc10.164 Carica papaya HOM05D007289 ORTHO05D009215 6.9e-61 238.8 293 46.8
HPP92_000676 Vanilla planifolia HOM05D007289 ORTHO05D009215 1.4e-58 231.1 270 47.0
Glyma.15G013100 Glycine max HOM05D007289 ORTHO05D009215 4.3e-55 219.5 240 51.2
Pp3c15_20480 Physcomitrium patens HOM05D007289 ORTHO05D009215 2.2e-51 207.2 311 36.7
Eucgr.F03006 Eucalyptus grandis HOM05D007289 ORTHO05D009215 6.5e-51 205.7 225 51.1
Gohir.D03G073900 Gossypium hirsutum HOM05D007289 ORTHO05D009215 2.5e-47 193.7 194 58.2
unitig_21.g20513 Utricularia gibba HOM05D007289 ORTHO05D009215 3.3e-47 193.4 389 35.7
FAN05G4017 Fragaria x ananassa HOM05D007289 ORTHO05D009215 2.2e-46 190.7 202 53.5
Mapoly0044s0047 Marchantia polymorpha HOM05D007289 ORTHO05D009215 3.1e-45 186.8 373 35.1
FAN05G4871 Fragaria x ananassa HOM05D007289 ORTHO05D009215 9.0e-45 185.3 113 76.1
ClCG09G002310 Citrullus lanatus HOM05D007289 ORTHO05D009215 6.5e-43 179.1 179 55.3
TWI12G0812 Tripterygium wilfordii HOM05D007289 ORTHO05D009215 3.1e-37 160.2 196 49.0
SEGI_13111 Sequoiadendron giganteum HOM05D007289 ORTHO05D009215 3.8e-35 153.3 198 44.9
Zm00001eb377280 Zea mays HOM05D007289 ORTHO05D009215 4.4e-31 139.8 190 41.1
Lj2P1136T43 Lonicera japonica HOM05D007289 ORTHO05D009215 6.9e-29 132.5 113 58.4
CBR_g23739 Chara braunii HOM05D007289 ORTHO05D009215 1.3e-27 128.3 142 43.0
ClCG09G002320 Citrullus lanatus HOM05D007289 ORTHO05D009215 2.2e-27 127.5 249 35.7
Ah.01g011120 Amaranthus hybridus HOM05D007289 ORTHO05D009215 4.8e-22 109.8 147 42.9
Hma1.2p1_0845F.1_g227540 Hydrangea macrophylla HOM05D007289 ORTHO05D009215 1.1e-21 108.6 132 52.3
Pp3c21_18730 Physcomitrium patens HOM05D007289 ORTHO05D009215 1.1e-10 72.0 102 36.3


User provided reference genes

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