Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc04g009730.4 Solanum lycopersicum HOM05D005462 ORTHO05D006718 5.2e-56 223.0 109 100.0
Sopen04g004840 Solanum pennellii HOM05D005462 ORTHO05D006718 3.4e-55 220.3 109 99.1
PGSC0003DMG400016997 Solanum tuberosum HOM05D005462 ORTHO05D006718 4.6e-52 209.9 109 93.6
CAN.G186.57 Capsicum annuum HOM05D005462 ORTHO05D006718 1.6e-41 174.9 106 81.1
Peaxi162Scf00195g01111 Petunia axillaris HOM05D005462 ORTHO05D006718 1.5e-39 168.3 105 78.1
Nitab4.5_0003787g0050 Nicotiana tabacum HOM05D005462 ORTHO05D006718 7.9e-36 156.0 105 73.3
Peaxi162Scf00125g00414 Petunia axillaris HOM05D005462 ORTHO05D006718 7.9e-36 156.0 105 75.2
Nitab4.5_0001047g0040 Nicotiana tabacum HOM05D000001 ORTHO05D000003 1.0e-35 155.6 105 74.3
Solyc11g006680.3 Solanum lycopersicum HOM05D005462 ORTHO05D006718 1.5e-34 151.8 104 72.1
PGSC0003DMG402007600 Solanum tuberosum HOM05D005462 ORTHO05D006718 4.3e-34 150.2 104 72.1
Sopen11g002610 Solanum pennellii HOM05D005462 ORTHO05D006718 5.6e-34 149.8 104 72.1
CAN.G143.13 Capsicum annuum HOM05D005462 ORTHO05D006718 1.1e-32 145.6 104 70.2
Oeu033987.1 Olea europaea HOM05D005462 ORTHO05D006718 8.4e-30 136.0 101 67.3
Cc02_g09510 Coffea canephora HOM05D005462 ORTHO05D006718 1.4e-29 135.2 114 63.2
Dinv08599 Davidia involucrata HOM05D005462 ORTHO05D006718 2.4e-29 134.4 97 67.0
MD07G1061700 Malus domestica HOM05D005462 ORTHO05D006718 4.2e-29 133.7 102 64.7
Lsat_1_v5_gn_9_53421 Lactuca sativa HOM05D005462 ORTHO05D006718 7.1e-29 132.9 80 76.2
Lj2C34T7 Lonicera japonica HOM05D005462 ORTHO05D006718 7.1e-29 132.9 93 68.8
MSTRG.27558 Avicennia marina HOM05D005462 ORTHO05D006718 9.3e-29 132.5 96 67.7
RcHm_v2.0_Chr1g0336351 Rosa chinensis HOM05D005462 ORTHO05D006718 2.7e-28 131.0 101 63.4
Thecc.10G115600 Theobroma cacao HOM05D005462 ORTHO05D006718 3.5e-28 130.6 99 63.6
FAN10G0457 Fragaria x ananassa HOM05D005462 ORTHO05D006718 4.6e-28 130.2 105 60.0
Cpa.g.sc1114.1 Carica papaya HOM05D005462 ORTHO05D006718 6.0e-28 129.8 103 63.1
ECA232G2701 Erigeron canadensis HOM05D005462 ORTHO05D006718 6.0e-28 129.8 83 72.3
Eucgr.G02683 Eucalyptus grandis HOM05D005462 ORTHO05D006718 6.0e-28 129.8 98 65.3
Cfa010538 Carpinus fangiana HOM05D005462 ORTHO05D006718 7.9e-28 129.4 102 64.7
Haze_03474 Corylus avellana HOM05D005462 ORTHO05D006718 7.9e-28 129.4 102 64.7
FAN06G4410 Fragaria x ananassa HOM05D005462 ORTHO05D006718 7.9e-28 129.4 105 61.0
HanXRQChr11g0321471 Helianthus annuus HOM05D005462 ORTHO05D006718 7.9e-28 129.4 103 62.1
PGR142G1862 Punica granatum HOM05D005462 ORTHO05D006718 7.9e-28 129.4 96 63.5
MBI01_g28355_MAGBIO Magnolia biondii HOM05D005462 ORTHO05D006718 1.3e-27 128.6 87 69.0
CSS0015574 Camellia sinensis var. sinensis HOM05D005462 ORTHO05D006718 1.8e-27 128.3 87 71.3
SalBow3G0159 Salvia bowleyana HOM05D005462 ORTHO05D006718 1.8e-27 128.3 87 69.0
HanXRQChr11g0321421 Helianthus annuus HOM05D005462 ORTHO05D006718 2.3e-27 127.9 104 59.6
FvH4_7g06690 Fragaria vesca HOM05D005462 ORTHO05D006718 3.0e-27 127.5 105 60.0
Nn2g14251 Nelumbo nucifera HOM05D005462 ORTHO05D006718 3.0e-27 127.5 97 66.0
Atru.chr12.1058 Acer truncatum HOM05D005462 ORTHO05D006718 3.9e-27 127.1 98 61.2
Duzib128G2019 Durio zibethinus HOM05D005462 ORTHO05D006718 3.9e-27 127.1 103 60.2
QL04p046981 Quercus lobata HOM05D005462 ORTHO05D006718 3.9e-27 127.1 102 62.7
FAN03G2522 Fragaria x ananassa HOM05D005462 ORTHO05D006718 6.7e-27 126.3 105 60.0
TAR636G3557 Trochodendron aralioides HOM05D005462 ORTHO05D006718 6.7e-27 126.3 104 60.6
Actinidia03844 Actinidia chinensis HOM05D005462 ORTHO05D006718 1.1e-26 125.6 105 61.9
CiPaw.13G042600 Carya illinoinensis HOM05D005462 ORTHO05D006718 1.5e-26 125.2 98 63.3
DCAR_028403 Daucus carota HOM05D005462 ORTHO05D006718 1.5e-26 125.2 109 58.7
Migut.F00860 Erythranthe guttata HOM05D005462 ORTHO05D006718 3.3e-26 124.0 83 69.9
arahy.Tifrunner.gnm1.ann1.LTKS6Y Arachis hypogaea HOM05D005462 ORTHO05D006718 4.3e-26 123.6 100 62.0
Gohir.A13G009500 Gossypium hirsutum HOM05D005462 ORTHO05D006718 4.3e-26 123.6 90 64.4
TWI15G0792 Tripterygium wilfordii HOM05D005462 ORTHO05D006718 4.3e-26 123.6 83 69.9
CANSAT56G2776 Cannabis sativa HOM05D005462 ORTHO05D006718 5.6e-26 123.2 84 71.4
Gohir.D13G010200 Gossypium hirsutum HOM05D005462 ORTHO05D006718 5.6e-26 123.2 90 64.4
Gorai.013G010900 Gossypium raimondii HOM05D005462 ORTHO05D006718 5.6e-26 123.2 90 64.4
Prupe.2G071400 Prunus persica HOM05D005462 ORTHO05D006718 5.6e-26 123.2 98 63.3
arahy.Tifrunner.gnm1.ann1.D9T4RB Arachis hypogaea HOM05D005462 ORTHO05D006718 7.4e-26 122.9 100 62.0
Sc09g0005160 Simmondsia chinensis HOM05D005462 ORTHO05D006718 1.6e-25 121.7 86 68.6
GSVIVG01034651001 Vitis vinifera HOM05D005462 ORTHO05D006718 2.1e-25 121.3 90 61.1
CDE06G1106 Ceratophyllum demersum HOM05D005462 ORTHO05D006718 2.8e-25 120.9 118 54.2
Sed0013359 Sechium edule HOM05D005462 ORTHO05D006718 2.8e-25 120.9 98 65.3
Glyma.10G122100 Glycine max HOM05D005462 ORTHO05D006718 4.8e-25 120.2 96 59.4
Lalb_Chr01g0010721 Lupinus albus HOM05D005462 ORTHO05D006718 4.8e-25 120.2 98 59.2
Lj6g0019256 Lotus japonicus HOM05D005462 ORTHO05D006718 6.2e-25 119.8 103 58.3
Medtr1g048080 Medicago truncatula HOM05D005462 ORTHO05D006718 6.2e-25 119.8 96 59.4
Potri.008G017400 Populus trichocarpa HOM05D005462 ORTHO05D006718 6.2e-25 119.8 101 60.4
THA.LOC104823152 Tarenaya hassleriana HOM05D005462 ORTHO05D006718 6.2e-25 119.8 96 57.3
AUR62018420 Chenopodium quinoa HOM05D005462 ORTHO05D006718 8.1e-25 119.4 96 60.4
Ca_13242_v3 Cicer arietinum L. HOM05D005462 ORTHO05D006718 8.1e-25 119.4 97 59.8
Ca_30156_v3 Cicer arietinum L. HOM05D005462 ORTHO05D006718 8.1e-25 119.4 97 59.8
EL10Ac3g07311 Beta vulgaris HOM05D005462 ORTHO05D006718 1.1e-24 119.0 100 59.0
AUR62021021 Chenopodium quinoa HOM05D005462 ORTHO05D006718 1.1e-24 119.0 96 60.4
A10p31410 Brassica napus HOM05D005462 ORTHO05D006718 1.4e-24 118.6 98 58.2
BraA10t45187Z Brassica rapa HOM05D005462 ORTHO05D006718 1.4e-24 118.6 98 58.2
C09p72080 Brassica napus HOM05D005462 ORTHO05D006718 1.8e-24 118.2 98 58.2
BolC9t59953H Brassica oleracea HOM05D005462 ORTHO05D006718 1.8e-24 118.2 98 58.2
AT5G04810 Arabidopsis thaliana HOM05D005462 ORTHO05D006718 2.4e-24 117.9 97 58.8
Thhalv10012596m.g Eutrema salsugineum HOM05D005462 ORTHO05D006718 3.1e-24 117.5 76 69.7
BcaC06g32185 Brassica carinata HOM05D005462 ORTHO05D006718 4.0e-24 117.1 104 54.8
Sp6g38020 Schrenkiella parvula HOM05D005462 ORTHO05D006718 4.0e-24 117.1 76 71.1
Psat0s3982g0040 Pisum sativum HOM05D005462 ORTHO05D006718 5.3e-24 116.7 97 59.8
AL6G14460 Arabidopsis lyrata HOM05D005462 ORTHO05D006718 9.0e-24 115.9 97 57.7
ClCG05G021870 Citrullus lanatus HOM05D005462 ORTHO05D006718 9.0e-24 115.9 98 65.3
Glyma.20G074200 Glycine max HOM05D005462 ORTHO05D006718 9.0e-24 115.9 81 65.4
Sabra10G0188800 Salix brachista HOM05D005462 ORTHO05D006718 9.0e-24 115.9 97 58.8
Hund06792 Selenicereus undatus HOM05D005462 ORTHO05D006718 9.0e-24 115.9 95 60.0
Aqoxy4G02697 Aquilegia oxysepala HOM05D005462 ORTHO05D006718 1.2e-23 115.5 116 50.0
Aa31LG11G5620 Aethionema arabicum HOM05D005462 ORTHO05D000003 3.4e-23 114.0 76 67.1
Potri.010G241300 Populus trichocarpa HOM05D005462 ORTHO05D006718 3.4e-23 114.0 96 58.3
Phvul.007G234900 Phaseolus vulgaris HOM05D005462 ORTHO05D006718 4.5e-23 113.6 81 64.2
SGA_v2.0_scaffold329G48874 Striga asiatica HOM05D005462 ORTHO05D006718 5.8e-23 113.2 98 56.1
Carub.0006s0369 Capsella rubella HOM05D005462 ORTHO05D006718 7.6e-23 112.8 75 68.0
Ah.04g150500 Amaranthus hybridus HOM05D005462 ORTHO05D006718 1.0e-22 112.5 96 60.4
CARHR208470 Cardamine hirsuta HOM05D005462 ORTHO05D006718 1.0e-22 112.5 75 68.0
VMungo0720G0270 Vigna mungo HOM05D005462 ORTHO05D006718 1.0e-22 112.5 81 65.4
Sabra08G0010900 Salix brachista HOM05D005462 ORTHO05D006718 1.3e-22 112.1 95 57.9
MELO3C012341.2 Cucumis melo HOM05D005462 ORTHO05D006718 1.7e-22 111.7 94 62.8
TPR.G19815 Trifolium pratense HOM05D005462 ORTHO05D006718 1.7e-22 111.7 103 57.3
CsaV3_5G035270 Cucumis sativus L. HOM05D005462 ORTHO05D006718 6.5e-22 109.8 88 64.8
Manes.07G085300 Manihot esculenta HOM05D005462 ORTHO05D006718 8.4e-22 109.4 103 57.3
ATR0772G220 Amborella trichopoda HOM05D005462 ORTHO05D006718 1.4e-21 108.6 89 58.4
PSO339G2458 Papaver somniferum HOM05D005462 ORTHO05D006718 4.6e-20 103.6 84 58.3
PSO384G2581 Papaver somniferum HOM05D005462 ORTHO05D006718 4.6e-20 103.6 84 58.3
HPP92_027469 Vanilla planifolia HOM05D005462 ORTHO05D006718 4.6e-20 103.6 84 60.7
Zm00001eb434090 Zea mays HOM05D005462 ORTHO05D006718 1.5e-18 98.6 106 49.1
Oeu033283.1 Olea europaea HOM05D005462 ORTHO05D006718 3.7e-17 94.0 59 76.3
vmacro07266 Vaccinium macrocarpon HOM05D005462 ORTHO05D006718 1.4e-16 92.0 58 77.6
CSS0018603 Camellia sinensis var. sinensis HOM05D005462 ORTHO05D006718 6.9e-16 89.7 44 84.1
vmacro05136 Vaccinium macrocarpon HOM05D005462 ORTHO05D006718 2.0e-15 88.2 71 64.8
SEGI_04507 Sequoiadendron giganteum HOM05D005462 ORTHO05D006718 7.6e-15 86.3 107 42.1
Pp3c16_280 Physcomitrium patens HOM05D005462 ORTHO05D006718 8.4e-14 82.8 101 41.6
AagrBONN_evm.TU.Sc2ySwM_362.2024 Anthoceros agrestis HOM05D005462 ORTHO05D006718 1.2e-12 79.0 99 46.5
BolC9t55910H Brassica oleracea HOM05D003366 ORTHO05D004045 2.7e-12 77.8 74 56.8
C09p30460 Brassica napus HOM05D003366 ORTHO05D004045 1.0e-11 75.9 45 73.3
HPP92_013817 Vanilla planifolia HOM05D005462 ORTHO05D006718 1.8e-11 75.1 54 64.8
Pp3c5_10110 Physcomitrium patens HOM05D005462 ORTHO05D006718 1.5e-10 72.0 75 37.3
CDE06G0092 Ceratophyllum demersum HOM05D005462 ORTHO05D006718 7.4e-10 69.7 37 81.1
Mapoly0061s0009 Marchantia polymorpha HOM05D005462 ORTHO05D006718 1.7e-06 58.5 66 48.5
MBI01_g28354_MAGBIO Magnolia biondii HOM05D005462 ORTHO05D006718 6.5e-06 56.6 40 67.5


User provided reference genes

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