Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc01g108430.3 Solanum lycopersicum HOM05D006779 ORTHO05D008491 3.0e-132 475.3 263 100.0
Sopen01g050660 Solanum pennellii HOM05D006779 ORTHO05D008491 3.6e-130 468.4 263 98.5
PGSC0003DMG400025811 Solanum tuberosum HOM05D006779 ORTHO05D008491 2.0e-128 462.6 263 97.7
Nitab4.5_0004334g0110 Nicotiana tabacum HOM05D006779 ORTHO05D008491 8.2e-114 414.1 263 88.2
Nitab4.5_0005583g0020 Nicotiana tabacum HOM05D006779 ORTHO05D008491 4.6e-109 398.3 263 85.2
Peaxi162Scf00016g01637 Petunia axillaris HOM05D006779 ORTHO05D008491 3.8e-103 378.6 248 86.3
CAN.G322.16 Capsicum annuum HOM05D006779 ORTHO05D008491 3.0e-100 369.0 263 82.5
Dinv23582 Davidia involucrata HOM05D006779 ORTHO05D008491 7.7e-88 327.8 264 72.7
Dinv42131 Davidia involucrata HOM05D006779 ORTHO05D008491 2.3e-84 316.2 263 68.4
Oeu064516.1 Olea europaea HOM05D006779 ORTHO05D008491 5.3e-81 305.1 263 66.2
Actinidia00459 Actinidia chinensis HOM05D006779 ORTHO05D008491 2.0e-80 303.1 264 64.4
Cc02_g18560 Coffea canephora HOM05D006779 ORTHO05D008491 5.0e-79 298.5 264 67.4
CSS0011815 Camellia sinensis var. sinensis HOM05D000591 ORTHO05D000579 1.6e-77 293.5 262 64.1
Migut.B00314 Erythranthe guttata HOM05D006779 ORTHO05D008491 2.1e-77 293.1 263 66.2
Sabra09G0080600 Salix brachista HOM05D006779 ORTHO05D008491 5.2e-76 288.5 263 65.8
Potri.009G105500 Populus trichocarpa HOM05D006779 ORTHO05D008491 8.3e-74 281.2 263 65.0
GSVIVG01031784001 Vitis vinifera HOM05D006779 ORTHO05D008491 5.4e-73 278.5 261 62.8
SGA_v2.0_scaffold90G27688 Striga asiatica HOM05D006779 ORTHO05D008491 1.2e-72 277.3 263 60.1
SalBow6G0615 Salvia bowleyana HOM05D006779 ORTHO05D008491 5.9e-72 275.0 261 65.1
FAN20G2937 Fragaria x ananassa HOM05D006779 ORTHO05D008491 7.7e-72 274.6 262 63.0
FvH4_2g06680 Fragaria vesca HOM05D006779 ORTHO05D008491 1.7e-71 273.5 262 62.6
FAN15G3147 Fragaria x ananassa HOM05D006779 ORTHO05D008491 1.7e-71 273.5 262 62.6
FAN24G0787 Fragaria x ananassa HOM05D006779 ORTHO05D008491 1.7e-71 273.5 262 62.6
CiPaw.05G054000 Carya illinoinensis HOM05D006779 ORTHO05D008491 2.3e-71 273.1 262 62.6
DCAR_029018 Daucus carota HOM05D000144 ORTHO05D003364 2.9e-71 272.7 264 62.1
Lj5C207T4 Lonicera japonica HOM05D006779 ORTHO05D008491 3.8e-71 272.3 264 63.6
MSTRG.16763 Avicennia marina HOM05D006779 ORTHO05D008491 5.0e-71 271.9 264 64.0
Haze_01903 Corylus avellana HOM05D006779 ORTHO05D008491 2.5e-70 269.6 262 62.2
QL11p037315 Quercus lobata HOM05D006779 ORTHO05D008491 1.6e-69 266.9 262 61.8
vmacro02181 Vaccinium macrocarpon HOM05D006779 ORTHO05D008491 1.6e-69 266.9 295 55.6
RcHm_v2.0_Chr6g0258731 Rosa chinensis HOM05D006779 ORTHO05D008491 1.0e-68 264.2 262 60.7
Rhsim11G0168500 Rhododendron simsii HOM05D006779 ORTHO05D008491 3.0e-68 262.7 291 55.3
Sed0011670 Sechium edule HOM05D006779 ORTHO05D008491 1.2e-67 260.8 261 59.4
Manes.15G142500 Manihot esculenta HOM05D006779 ORTHO05D008491 1.5e-67 260.4 263 61.2
CsaV3_7G008730 Cucumis sativus L. HOM05D006779 ORTHO05D008491 1.1e-65 254.2 261 58.2
Eucgr.I01169 Eucalyptus grandis HOM05D006779 ORTHO05D008491 1.4e-65 253.8 260 58.8
PGR142G0644 Punica granatum HOM05D006779 ORTHO05D008491 1.8e-65 253.4 261 58.2
SGA_v2.0_scaffold90G27693 Striga asiatica HOM05D006779 ORTHO05D008491 1.2e-64 250.8 257 56.4
Prupe.8G119200 Prunus persica HOM05D006779 ORTHO05D008491 3.5e-64 249.2 262 59.5
Ciclev10029963m.g Citrus clementina HOM05D006779 ORTHO05D008491 5.9e-64 248.4 265 61.1
Thecc.02G097400 Theobroma cacao HOM05D006779 ORTHO05D008491 7.8e-64 248.1 261 62.5
Nn5g30192 Nelumbo nucifera HOM05D006779 ORTHO05D008491 1.7e-63 246.9 261 59.4
unitig_60.g25783 Utricularia gibba HOM05D006779 ORTHO05D008491 3.8e-63 245.7 263 60.1
Sc18g0004890 Simmondsia chinensis HOM05D006779 ORTHO05D008491 1.5e-62 243.8 263 60.1
TWI79G0004 Tripterygium wilfordii HOM05D006779 ORTHO05D008491 1.5e-62 243.8 265 60.4
Atru.chr5.2773 Acer truncatum HOM05D006779 ORTHO05D008491 1.6e-61 240.4 266 59.4
Gorai.005G240600 Gossypium raimondii HOM05D006779 ORTHO05D008491 3.6e-61 239.2 262 59.9
Lalb_Chr09g0328181 Lupinus albus HOM05D006779 ORTHO05D008491 4.7e-61 238.8 260 57.7
arahy.Tifrunner.gnm1.ann1.8ZG09Z Arachis hypogaea HOM05D006779 ORTHO05D008491 6.1e-61 238.4 262 58.8
MD05G1075500 Malus domestica HOM05D006779 ORTHO05D008491 8.0e-61 238.0 262 58.4
Gohir.D02G212600 Gossypium hirsutum HOM05D006779 ORTHO05D008491 1.0e-60 237.7 262 59.5
Phvul.007G247000 Phaseolus vulgaris HOM05D006779 ORTHO05D008491 1.4e-60 237.3 261 54.0
Aa31LG10G4420 Aethionema arabicum HOM05D006779 ORTHO05D008491 3.0e-60 236.1 260 57.7
TWI31G0027 Tripterygium wilfordii HOM05D006779 ORTHO05D008491 5.2e-60 235.3 265 58.1
Gohir.A03G191700 Gossypium hirsutum HOM05D006779 ORTHO05D008491 2.0e-59 233.4 262 58.4
Glyma.01G146900 Glycine max HOM05D006779 ORTHO05D008491 5.7e-59 231.9 260 55.8
Glyma.10G112900 Glycine max HOM05D006779 ORTHO05D008491 5.7e-59 231.9 260 55.8
Aqoxy6G01411 Aquilegia oxysepala HOM05D006779 ORTHO05D008491 7.5e-59 231.5 262 55.0
CANSAT25G0176 Cannabis sativa HOM05D006779 ORTHO05D008491 9.8e-59 231.1 264 56.1
ClCG02G005780 Citrullus lanatus HOM05D006779 ORTHO05D008491 2.9e-58 229.6 303 49.5
arahy.Tifrunner.gnm1.ann1.T066AP Arachis hypogaea HOM05D006779 ORTHO05D008491 8.3e-58 228.0 262 56.5
ECA234G4762 Erigeron canadensis HOM05D006779 ORTHO05D008491 2.4e-57 226.5 265 55.5
Sp1g36470 Schrenkiella parvula HOM05D006779 ORTHO05D008491 3.2e-57 226.1 262 56.9
arahy.Tifrunner.gnm1.ann1.QJKD6Y Arachis hypogaea HOM05D006779 ORTHO05D008491 2.7e-56 223.0 262 55.7
Glyma.02G159500 Glycine max HOM05D006779 ORTHO05D008491 2.7e-56 223.0 261 54.8
Thhalv10011741m.g Eutrema salsugineum HOM05D006779 ORTHO05D008491 4.6e-56 222.2 262 55.7
MBI02_g21199_MAGBIO Magnolia biondii HOM05D006779 ORTHO05D008491 7.8e-56 221.5 273 52.7
Lsat_1_v5_gn_5_113321 Lactuca sativa HOM05D006779 ORTHO05D008491 1.0e-55 221.1 262 51.1
HPP92_004257 Vanilla planifolia HOM05D006779 ORTHO05D008491 1.0e-55 221.1 261 54.8
EL10Ac3g06870 Beta vulgaris HOM05D006779 ORTHO05D008491 3.0e-55 219.5 260 58.1
COL.COLO4_32686 Corchorus olitorius HOM05D006779 ORTHO05D008491 1.5e-54 217.2 263 56.3
Psat7g121840 Pisum sativum HOM05D006779 ORTHO05D008491 3.3e-54 216.1 264 54.2
Ca_18655_v3 Cicer arietinum L. HOM05D006779 ORTHO05D008491 4.3e-54 215.7 260 55.0
HanXRQChr10g0303251 Helianthus annuus HOM05D006779 ORTHO05D008491 4.3e-54 215.7 263 55.5
AT1G49590 Arabidopsis thaliana HOM05D006779 ORTHO05D008491 5.6e-54 215.3 262 54.6
PSO541G4058 Papaver somniferum HOM05D006779 ORTHO05D008491 6.2e-53 211.8 264 53.4
A06p03540 Brassica napus HOM05D006779 ORTHO05D008491 2.3e-52 209.9 263 54.0
BolC6t35591H Brassica oleracea HOM05D006779 ORTHO05D008491 8.9e-52 208.0 260 53.8
Lj4g0006122 Lotus japonicus HOM05D006779 ORTHO05D008491 8.9e-52 208.0 260 55.0
BraA06t23562Z Brassica rapa HOM05D006779 ORTHO05D008491 2.6e-51 206.5 261 53.6
PSO675G5018 Papaver somniferum HOM05D006779 ORTHO05D008491 7.5e-51 204.9 264 52.7
AUR62034187 Chenopodium quinoa HOM05D006779 ORTHO05D008491 9.8e-51 204.5 263 54.8
Hund00325 Selenicereus undatus HOM05D006779 ORTHO05D008491 1.4e-49 200.7 261 54.4
Carub.0001s3879 Capsella rubella HOM05D006779 ORTHO05D008491 1.9e-49 200.3 263 54.0
Ah.04g152710 Amaranthus hybridus HOM05D006779 ORTHO05D008491 7.0e-49 198.4 257 51.0
Medtr4g086640 Medicago truncatula HOM05D006779 ORTHO05D008491 3.5e-48 196.1 261 52.9
BcaNung06359 Brassica carinata HOM05D006779 ORTHO05D008491 7.8e-48 194.9 263 50.6
AUR62022456 Chenopodium quinoa HOM05D006779 ORTHO05D008491 5.0e-47 192.2 303 47.9
AL1G56960 Arabidopsis lyrata HOM05D006779 ORTHO05D008491 3.3e-46 189.5 267 50.6
SHI05379 Sapria himalayana HOM05D006779 ORTHO05D008491 1.1e-41 174.5 271 47.2
MELO3C018438.2 Cucumis melo HOM05D006779 ORTHO05D008491 1.9e-41 173.7 215 54.4
CDE06G1966 Ceratophyllum demersum HOM05D006779 ORTHO05D008491 1.6e-40 170.6 261 44.4
Mapoly0157s0003 Marchantia polymorpha HOM05D006779 ORTHO05D008491 1.9e-38 163.7 301 42.5
Zm00001eb373090 Zea mays HOM05D006779 ORTHO05D008491 4.0e-36 156.0 266 45.5
ATR0097G032 Amborella trichopoda HOM05D006779 ORTHO05D008491 1.7e-34 150.6 253 41.5
TAR628G0388 Trochodendron aralioides HOM05D006779 ORTHO05D008491 1.9e-33 147.1 116 65.5
AagrBONN_evm.TU.Sc2ySwM_344.4302 Anthoceros agrestis HOM05D006779 ORTHO05D008491 5.4e-33 145.6 288 41.3
FAN20G1913 Fragaria x ananassa HOM05D006779 ORTHO05D008491 9.2e-33 144.8 154 61.7
C06p04620 Brassica napus HOM05D006779 ORTHO05D008491 1.0e-31 141.4 217 50.7
SMO367G0139 Selaginella moellendorffii HOM05D006779 ORTHO05D008491 8.7e-31 138.3 287 38.7
CSS0024784 Camellia sinensis var. sinensis HOM05D006779 ORTHO05D008491 7.3e-30 135.2 194 47.9
Cpa.g.sc62.36 Carica papaya HOM05D006779 ORTHO05D008491 2.1e-29 133.7 101 65.3
Pp3c14_26080 Physcomitrium patens HOM05D006779 ORTHO05D008491 1.4e-28 131.0 292 38.7
CSS0021002 Camellia sinensis var. sinensis HOM05D006779 ORTHO05D008491 1.8e-28 130.6 194 46.4
CBR_g17671 Chara braunii HOM05D006779 ORTHO05D008491 2.6e-27 126.7 334 37.1
HPP92_004235 Vanilla planifolia HOM05D006779 ORTHO05D008491 2.6e-27 126.7 215 47.4
CARHR039640 Cardamine hirsuta HOM05D006779 ORTHO05D008491 2.7e-24 116.7 151 57.6
TPR.G23511 Trifolium pratense HOM05D006779 ORTHO05D008491 2.3e-23 113.6 70 78.6
Os06g0215200 Oryza sativa ssp. japonica HOM05D006779 ORTHO05D008491 4.8e-21 105.9 70 70.0
TPR.G23531 Trifolium pratense HOM05D006779 ORTHO05D008491 1.2e-19 101.3 149 51.0
AUR62042088 Chenopodium quinoa HOM05D006779 ORTHO05D008491 3.8e-18 96.3 215 43.7
CSS0022737 Camellia sinensis var. sinensis HOM05D006779 ORTHO05D008491 3.2e-17 93.2 187 41.7
CSS0034996 Camellia sinensis var. sinensis HOM05D006779 ORTHO05D008491 4.2e-17 92.8 194 39.7
CSS0005405 Camellia sinensis var. sinensis HOM05D006779 ORTHO05D008491 3.9e-15 86.3 152 42.1
CSS0011003 Camellia sinensis var. sinensis HOM05D006779 ORTHO05D008491 3.9e-15 86.3 152 42.1
CDE03G0027 Ceratophyllum demersum HOM05D006779 ORTHO05D008491 2.8e-13 80.1 261 32.6
TAR628G1516 Trochodendron aralioides HOM05D006779 ORTHO05D008491 1.0e-07 61.6 120 41.7
EL10Ac9g20940 Beta vulgaris HOM05D002686 ORTHO05D003222 5.1e-07 59.3 56 62.5


User provided reference genes

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