Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0024786 Sechium edule HOM05D007300 ORTHO05D009301 7.2e-281 969.9 489 100.0
ClCG03G007190 Citrullus lanatus HOM05D007300 ORTHO05D009301 1.8e-207 726.1 454 82.6
CsaV3_1G032780 Cucumis sativus L. HOM05D007300 ORTHO05D009301 1.4e-199 699.9 453 79.9
CiPaw.10G096200 Carya illinoinensis HOM05D007300 ORTHO05D009301 7.5e-137 491.5 459 59.0
Prupe.4G073700 Prunus persica HOM05D007300 ORTHO05D009301 7.7e-134 481.5 460 56.5
Cfa001024 Carpinus fangiana HOM05D007300 ORTHO05D009301 8.6e-133 478.0 459 57.3
MD05G1291800 Malus domestica HOM05D007300 ORTHO05D009301 1.6e-131 473.8 462 55.8
QL05p060322 Quercus lobata HOM05D007300 ORTHO05D009301 2.6e-129 466.5 459 56.2
RcHm_v2.0_Chr5g0012901 Rosa chinensis HOM05D007300 ORTHO05D009301 5.7e-129 465.3 413 58.6
FvH4_3g06410 Fragaria vesca HOM05D007300 ORTHO05D009301 9.8e-129 464.5 453 55.8
FAN21G2574 Fragaria x ananassa HOM05D007300 ORTHO05D009301 1.8e-127 460.3 453 55.2
GSVIVG01021378001 Vitis vinifera HOM05D007300 ORTHO05D009301 1.8e-127 460.3 451 56.8
Potri.001G353800 Populus trichocarpa HOM05D007300 ORTHO05D009301 2.7e-126 456.4 464 54.1
CANSAT35G1474 Cannabis sativa HOM05D007300 ORTHO05D009301 7.8e-126 454.9 459 56.4
Ciclev10014510m.g Citrus clementina HOM05D007300 ORTHO05D009301 7.3e-124 448.4 457 54.5
Thecc.06G157700 Theobroma cacao HOM05D007300 ORTHO05D009301 3.6e-123 446.0 461 54.7
TWI73G0852 Tripterygium wilfordii HOM05D007300 ORTHO05D009301 8.0e-123 444.9 462 53.5
Haze_05485 Corylus avellana HOM05D007300 ORTHO05D009301 1.0e-122 444.5 521 51.1
TAR627G1006 Trochodendron aralioides HOM05D007300 ORTHO05D009301 3.1e-122 443.0 429 55.7
Gohir.D10G038600 Gossypium hirsutum HOM05D007300 ORTHO05D009301 8.9e-122 441.4 464 54.1
Gorai.011G040700 Gossypium raimondii HOM05D007300 ORTHO05D009301 8.9e-122 441.4 464 54.1
CSS0020184 Camellia sinensis var. sinensis HOM05D007300 ORTHO05D009301 1.5e-121 440.7 461 54.4
Dinv32299 Davidia involucrata HOM05D007300 ORTHO05D009301 1.5e-121 440.7 458 55.7
Gohir.A10G037600 Gossypium hirsutum HOM05D007300 ORTHO05D009301 9.8e-121 438.0 462 53.2
FAN11G2841 Fragaria x ananassa HOM05D007300 ORTHO05D009301 2.2e-120 436.8 514 49.2
Sabra16G0232700 Salix brachista HOM05D007300 ORTHO05D009301 1.1e-119 434.5 428 55.8
Actinidia19486 Actinidia chinensis HOM05D007300 ORTHO05D009301 8.6e-117 424.9 459 52.9
Cpa.g.sc17.110 Carica papaya HOM05D007300 ORTHO05D009301 8.1e-115 418.3 397 56.4
Medtr8g088030 Medicago truncatula HOM05D007300 ORTHO05D009301 1.1e-114 417.9 411 54.5
Ca_17871_v3 Cicer arietinum L. HOM05D007300 ORTHO05D009301 4.0e-114 416.0 378 57.7
Nn3g20905 Nelumbo nucifera HOM05D007300 ORTHO05D009301 1.5e-113 414.1 392 57.1
Glyma.08G121900 Glycine max HOM05D007300 ORTHO05D009301 2.0e-113 413.7 410 55.6
Glyma.05G164500 Glycine max HOM05D007300 ORTHO05D009301 4.4e-113 412.5 371 59.3
TPR.G6793 Trifolium pratense HOM05D007300 ORTHO05D009301 5.8e-113 412.1 377 55.4
MBI10_g02388_MAGBIO Magnolia biondii HOM05D007300 ORTHO05D009301 6.4e-112 408.7 421 52.7
Phvul.002G244500 Phaseolus vulgaris HOM05D007300 ORTHO05D009301 6.4e-112 408.7 441 52.6
COL.COLO4_22798 Corchorus olitorius HOM05D007300 ORTHO05D009301 1.4e-111 407.5 404 57.4
Lj4g0024386 Lotus japonicus HOM05D007300 ORTHO05D009301 2.4e-111 406.8 424 52.4
THA.LOC104827733 Tarenaya hassleriana HOM05D007300 ORTHO05D009301 3.2e-111 406.4 470 49.4
Nitab4.5_0001283g0060 Nicotiana tabacum HOM05D007300 ORTHO05D009301 5.4e-111 405.6 403 55.8
Nitab4.5_0003714g0040 Nicotiana tabacum HOM05D007300 ORTHO05D009301 1.2e-110 404.4 368 59.0
VMungo0251G3397 Vigna mungo HOM05D007300 ORTHO05D009301 2.1e-110 403.7 354 60.7
Lalb_Chr13g0295471 Lupinus albus HOM05D007300 ORTHO05D009301 4.6e-110 402.5 376 56.6
Lsat_1_v5_gn_7_31040 Lactuca sativa HOM05D007300 ORTHO05D009301 6.0e-110 402.1 406 55.9
Thhalv10000812m.g Eutrema salsugineum HOM05D007300 ORTHO05D009301 5.1e-109 399.1 431 51.3
Manes.17G064900 Manihot esculenta HOM05D007300 ORTHO05D009301 6.6e-109 398.7 430 53.0
Atru.chr10.1398 Acer truncatum HOM05D007300 ORTHO05D009301 2.5e-108 396.7 343 61.2
ECA236G2360 Erigeron canadensis HOM05D007300 ORTHO05D009301 1.2e-107 394.4 375 56.5
arahy.Tifrunner.gnm1.ann1.D64P8M Arachis hypogaea HOM05D007300 ORTHO05D009301 2.1e-107 393.7 438 50.5
HanXRQChr04g0119571 Helianthus annuus HOM05D007300 ORTHO05D009301 2.1e-107 393.7 366 60.4
Aqoxy1G01857 Aquilegia oxysepala HOM05D007300 ORTHO05D009301 2.8e-107 393.3 422 51.2
arahy.Tifrunner.gnm1.ann1.FQ35JE Arachis hypogaea HOM05D007300 ORTHO05D009301 2.8e-107 393.3 445 50.1
Atru.chr10.1407 Acer truncatum HOM05D007300 ORTHO05D009301 6.2e-107 392.1 343 60.9
SGA_v2.0_scaffold1G00132 Striga asiatica HOM05D007300 ORTHO05D009301 8.1e-107 391.7 411 52.3
AUR62027555 Chenopodium quinoa HOM05D007300 ORTHO05D009301 1.4e-106 391.0 400 53.8
Oeu021524.1 Olea europaea HOM05D007300 ORTHO05D009301 1.4e-106 391.0 391 53.7
AT5G46420 Arabidopsis thaliana HOM05D007300 ORTHO05D009301 1.8e-106 390.6 457 48.8
Aa31LG9G6430 Aethionema arabicum HOM05D007300 ORTHO05D009301 2.3e-106 390.2 449 49.4
PSO541G4163 Papaver somniferum HOM05D007300 ORTHO05D009301 2.3e-106 390.2 363 56.5
Sc05g0006590 Simmondsia chinensis HOM05D007300 ORTHO05D009301 2.3e-106 390.2 462 49.8
Eucgr.D00343 Eucalyptus grandis HOM05D007300 ORTHO05D009301 1.5e-105 387.5 373 55.0
AUR62035801 Chenopodium quinoa HOM05D007300 ORTHO05D009301 2.6e-105 386.7 385 54.3
SalBow8G1735 Salvia bowleyana HOM05D007300 ORTHO05D009301 4.4e-105 386.0 419 52.5
PSO675G3105 Papaver somniferum HOM05D007300 ORTHO05D009301 5.8e-105 385.6 361 55.7
Psat7g066760 Pisum sativum HOM05D007300 ORTHO05D009301 7.6e-105 385.2 410 51.2
BolC7t43517H Brassica oleracea HOM05D007300 ORTHO05D009301 9.9e-105 384.8 430 50.2
Carub.0008s0147 Capsella rubella HOM05D007300 ORTHO05D009301 9.9e-105 384.8 456 48.2
BraA06t27457Z Brassica rapa HOM05D007300 ORTHO05D009301 1.3e-104 384.4 388 53.9
A06p45940 Brassica napus HOM05D007300 ORTHO05D009301 2.2e-104 383.6 388 54.1
C07p29650 Brassica napus HOM05D007300 ORTHO05D009301 2.9e-104 383.3 388 53.4
DCAR_027959 Daucus carota HOM05D007300 ORTHO05D009301 3.7e-104 382.9 385 55.3
Sp2g11270 Schrenkiella parvula HOM05D007300 ORTHO05D009301 8.4e-104 381.7 388 53.1
CARHR175340 Cardamine hirsuta HOM05D007300 ORTHO05D009301 1.9e-103 380.6 458 48.0
Peaxi162Scf00649g00027 Petunia axillaris HOM05D007300 ORTHO05D009301 1.9e-103 380.6 353 57.5
AL8G11990 Arabidopsis lyrata HOM05D007300 ORTHO05D009301 2.1e-102 377.1 387 51.4
Sopen02g020340 Solanum pennellii HOM05D007300 ORTHO05D009301 2.1e-102 377.1 423 53.0
PGSC0003DMG400003073 Solanum tuberosum HOM05D007300 ORTHO05D009301 6.0e-102 375.6 425 53.2
Migut.M00959 Erythranthe guttata HOM05D007300 ORTHO05D009301 1.7e-101 374.0 353 56.9
Solyc02g071280.3 Solanum lycopersicum HOM05D007300 ORTHO05D009301 2.3e-101 373.6 423 53.0
CAN.G257.51 Capsicum annuum HOM05D007300 ORTHO05D009301 8.6e-101 371.7 374 56.1
Duzib235G1110 Durio zibethinus HOM05D007300 ORTHO05D009301 7.3e-100 368.6 457 47.9
Lj1C1181T32 Lonicera japonica HOM05D007300 ORTHO05D009301 2.1e-99 367.1 380 56.1
PGR044G1273 Punica granatum HOM05D007300 ORTHO05D009301 3.0e-93 346.7 316 58.5
EL10Ac8g19794 Beta vulgaris HOM05D007300 ORTHO05D009301 8.7e-93 345.1 388 50.8
unitig_92.g28150 Utricularia gibba HOM05D007300 ORTHO05D009301 1.6e-91 340.9 339 53.7
HPP92_023296 Vanilla planifolia HOM05D007300 ORTHO05D009301 2.4e-90 337.0 342 51.5
ATR1153G036 Amborella trichopoda HOM05D007300 ORTHO05D009301 3.4e-89 333.2 354 51.7
Zm00001eb296050 Zea mays HOM05D007300 ORTHO05D009301 3.3e-76 290.0 338 46.4
SEGI_38698 Sequoiadendron giganteum HOM05D007300 ORTHO05D009301 4.9e-72 276.2 339 44.5
FAN16G1565 Fragaria x ananassa HOM05D007300 ORTHO05D009301 2.5e-71 273.9 265 57.7
CDE06G2820 Ceratophyllum demersum HOM05D007300 ORTHO05D009301 2.8e-67 260.4 284 51.1
MELO3C002704.2 Cucumis melo HOM05D007300 ORTHO05D009301 1.3e-56 224.9 143 79.0
Os05g0566300 Oryza sativa ssp. japonica HOM05D007300 ORTHO05D009301 2.9e-56 223.8 210 52.9
Mapoly0019s0078 Marchantia polymorpha HOM05D007300 ORTHO05D009301 5.1e-53 213.0 395 37.0
HPP92_023271 Vanilla planifolia HOM05D007300 ORTHO05D009301 2.6e-52 210.7 340 36.8
Pp3c15_14250 Physcomitrium patens HOM05D007300 ORTHO05D009301 4.1e-50 203.4 344 36.0
AagrBONN_evm.TU.Sc2ySwM_228.1844 Anthoceros agrestis HOM05D007300 ORTHO05D004905 5.3e-50 203.0 349 36.4
Zm00001eb349440 Zea mays HOM05D007300 ORTHO05D009301 1.1e-42 178.7 176 50.6
Gorai.004G093400 Gossypium raimondii HOM05D007300 ORTHO05D009301 8.0e-38 162.5 131 59.5
Gohir.D08G088700 Gossypium hirsutum HOM05D007300 ORTHO05D009301 1.5e-36 158.3 131 58.8
SEGI_17563 Sequoiadendron giganteum HOM05D007300 ORTHO05D009301 2.7e-33 147.5 113 59.3
MCO05G669 Micromonas commoda HOM05D007300 ORTHO05D009301 4.5e-25 120.2 229 33.6
Cre03.g191950 Chlamydomonas reinhardtii HOM05D007300 ORTHO05D009301 6.3e-19 99.8 209 32.5
Zm00001eb184690 Zea mays HOM05D007300 ORTHO05D009301 7.0e-18 96.3 81 49.4
THA.LOC104798460 Tarenaya hassleriana HOM05D007300 ORTHO05D009301 2.3e-08 64.7 126 32.5


User provided reference genes

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