Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0021795 Sechium edule HOM05D007289 ORTHO05D009215 6.5e-213 743.8 381 100.0
CsaV3_7G033000 Cucumis sativus L. HOM05D007289 ORTHO05D009215 2.9e-168 595.5 374 82.9
MELO3C023367.2 Cucumis melo HOM05D007289 ORTHO05D009215 3.7e-168 595.1 374 83.2
Prupe.3G073900 Prunus persica HOM05D007289 ORTHO05D009215 5.9e-113 411.8 384 58.1
MD17G1197800 Malus domestica HOM05D007289 ORTHO05D009215 3.6e-110 402.5 390 57.2
TAR383G0594 Trochodendron aralioides HOM05D007289 ORTHO05D009215 2.2e-107 393.3 398 56.8
CSS0039074 Camellia sinensis var. sinensis HOM05D007289 ORTHO05D009215 1.2e-105 387.5 399 55.6
Ciclev10025766m.g Citrus clementina HOM05D007289 ORTHO05D009215 1.2e-105 387.5 387 57.6
Glyma.13G360800 Glycine max HOM05D007289 ORTHO05D009215 1.0e-104 384.4 383 55.4
Dinv30529 Davidia involucrata HOM05D007289 ORTHO05D009215 6.5e-104 381.7 401 55.9
VMungo1080G1522 Vigna mungo HOM05D007289 ORTHO05D009215 6.5e-104 381.7 385 54.8
Cfa002049 Carpinus fangiana HOM05D007289 ORTHO05D009215 4.2e-103 379.0 380 55.8
Ca_01106_v3 Cicer arietinum L. HOM05D007289 ORTHO05D009215 9.4e-103 377.9 376 54.5
Phvul.005G172600 Phaseolus vulgaris HOM05D007289 ORTHO05D009215 3.6e-102 375.9 383 54.3
Psat5g299280 Pisum sativum HOM05D007289 ORTHO05D009215 1.0e-101 374.4 383 54.6
RcHm_v2.0_Chr2g0137421 Rosa chinensis HOM05D007289 ORTHO05D009215 8.8e-101 371.3 383 55.9
TPR.G37243 Trifolium pratense HOM05D007289 ORTHO05D009215 5.7e-100 368.6 379 54.1
Lalb_Chr14g0373531 Lupinus albus HOM05D007289 ORTHO05D009215 1.3e-99 367.5 370 55.1
Lj9C506T12 Lonicera japonica HOM05D007289 ORTHO05D009215 1.7e-99 367.1 405 51.4
Lalb_Chr22g0351171 Lupinus albus HOM05D007289 ORTHO05D009215 2.2e-99 366.7 378 54.8
vmacro18934 Vaccinium macrocarpon HOM05D007289 ORTHO05D009215 2.2e-99 366.7 394 54.1
CiPaw.02G152300 Carya illinoinensis HOM05D007289 ORTHO05D009215 2.8e-99 366.3 344 56.7
Gohir.A02G122500 Gossypium hirsutum HOM05D007289 ORTHO05D009215 4.8e-99 365.5 379 53.0
CANSAT56G1700 Cannabis sativa HOM05D007289 ORTHO05D009215 1.1e-98 364.4 395 54.7
FvH4_6g30910 Fragaria vesca HOM05D007289 ORTHO05D009215 3.1e-98 362.8 389 55.5
Gorai.002G058300 Gossypium raimondii HOM05D007289 ORTHO05D009215 5.3e-98 362.1 388 52.3
Potri.001G178100 Populus trichocarpa HOM05D007289 ORTHO05D009215 7.0e-98 361.7 365 53.2
Manes.04G121300 Manihot esculenta HOM05D007289 ORTHO05D009215 9.1e-98 361.3 379 52.8
FAN02G0535 Fragaria x ananassa HOM05D007289 ORTHO05D009215 1.2e-97 360.9 389 55.3
QL05p025382 Quercus lobata HOM05D007289 ORTHO05D009215 1.2e-97 360.9 392 54.3
Lj3g0010801 Lotus japonicus HOM05D007289 ORTHO05D009215 3.5e-97 359.4 389 53.2
Medtr2g102430 Medicago truncatula HOM05D007289 ORTHO05D009215 3.5e-97 359.4 369 52.6
Atru.chr1.3224 Acer truncatum HOM05D007289 ORTHO05D009215 1.1e-95 354.4 392 53.1
DCAR_016227 Daucus carota HOM05D007289 ORTHO05D009215 2.5e-95 353.2 381 53.3
GSVIVG01017153001 Vitis vinifera HOM05D007289 ORTHO05D009215 2.5e-95 353.2 332 58.4
Sabra01G0148500 Salix brachista HOM05D007289 ORTHO05D009215 3.2e-95 352.8 379 50.1
Sc12g0009160 Simmondsia chinensis HOM05D007289 ORTHO05D009215 4.2e-95 352.4 402 50.7
Aqoxy7G01850 Aquilegia oxysepala HOM05D007289 ORTHO05D009215 2.7e-94 349.7 390 51.5
arahy.Tifrunner.gnm1.ann1.UJ7D22 Arachis hypogaea HOM05D007289 ORTHO05D009215 2.7e-94 349.7 386 53.6
arahy.Tifrunner.gnm1.ann1.HRS6MU Arachis hypogaea HOM05D007289 ORTHO05D009215 1.8e-93 347.1 386 52.8
Cc04_g03590 Coffea canephora HOM05D007289 ORTHO05D009215 6.8e-93 345.1 384 52.3
COL.COLO4_30328 Corchorus olitorius HOM05D007289 ORTHO05D009215 6.8e-93 345.1 384 51.0
Hund06601 Selenicereus undatus HOM05D007289 ORTHO05D009215 6.8e-93 345.1 400 50.5
MBI04_g26647_MAGBIO Magnolia biondii HOM05D007289 ORTHO05D009215 4.4e-92 342.4 386 51.8
Rhsim08G0218600 Rhododendron simsii HOM05D007289 ORTHO05D009215 7.5e-92 341.7 410 49.3
CARHR074820 Cardamine hirsuta HOM05D007289 ORTHO05D009215 1.3e-91 340.9 367 51.8
PSO782G0119 Papaver somniferum HOM05D007289 ORTHO05D009215 1.3e-91 340.9 380 50.0
PGSC0003DMG400016511 Solanum tuberosum HOM05D007289 ORTHO05D009215 2.2e-91 340.1 382 52.1
Nitab4.5_0002327g0060 Nicotiana tabacum HOM05D007289 ORTHO05D009215 3.7e-91 339.3 383 52.5
TWI75G1369 Tripterygium wilfordii HOM05D007289 ORTHO05D009215 3.1e-90 336.3 380 52.1
Sopen06g025060 Solanum pennellii HOM05D007289 ORTHO05D009215 4.1e-90 335.9 382 51.8
Aa31LG4G690 Aethionema arabicum HOM05D007289 ORTHO05D009215 9.1e-90 334.7 384 52.3
AL2G41080 Arabidopsis lyrata HOM05D007289 ORTHO05D009215 2.7e-89 333.2 371 51.2
Solyc06g066780.3 Solanum lycopersicum HOM05D007289 ORTHO05D009215 2.7e-89 333.2 381 51.2
Thhalv10018735m.g Eutrema salsugineum HOM05D007289 ORTHO05D009215 4.5e-89 332.4 381 51.4
Peaxi162Scf00207g00834 Petunia axillaris HOM05D007289 ORTHO05D009215 7.7e-89 331.6 309 57.0
MSTRG.11091 Avicennia marina HOM05D007289 ORTHO05D009215 3.8e-88 329.3 368 48.9
AUR62011614 Chenopodium quinoa HOM05D007289 ORTHO05D009215 3.8e-88 329.3 401 48.6
Thecc.06G082700 Theobroma cacao HOM05D007289 ORTHO05D009215 8.5e-88 328.2 383 50.7
AUR62016430 Chenopodium quinoa HOM05D007289 ORTHO05D009215 1.9e-87 327.0 396 49.5
PGR102G0666 Punica granatum HOM05D007289 ORTHO05D009215 1.9e-87 327.0 387 51.2
Sp5g35390 Schrenkiella parvula HOM05D007289 ORTHO05D009215 2.5e-87 326.6 373 51.7
THA.LOC104808206 Tarenaya hassleriana HOM05D007289 ORTHO05D009215 4.2e-87 325.9 377 50.9
AT1G80420 Arabidopsis thaliana HOM05D007289 ORTHO05D009215 7.2e-87 325.1 371 51.5
Oeu033497.1 Olea europaea HOM05D007289 ORTHO05D009215 7.2e-87 325.1 355 51.5
BcaC03g15968 Brassica carinata HOM05D007289 ORTHO05D009215 9.4e-87 324.7 370 49.7
BolC2t09743H Brassica oleracea HOM05D007289 ORTHO05D009215 2.1e-86 323.6 370 50.0
C02p37330 Brassica napus HOM05D007289 ORTHO05D009215 1.4e-85 320.9 370 49.7
Lsat_1_v5_gn_4_103480 Lactuca sativa HOM05D007289 ORTHO05D009215 1.8e-85 320.5 371 50.4
Carub.0002s2715 Capsella rubella HOM05D007289 ORTHO05D009215 1.2e-84 317.8 378 49.2
CAN.G395.19 Capsicum annuum HOM05D007289 ORTHO05D009215 1.5e-84 317.4 384 49.5
FAN09G0173 Fragaria x ananassa HOM05D007289 ORTHO05D009215 3.4e-84 316.2 359 51.5
Os06g0144000 Oryza sativa ssp. japonica HOM05D007289 ORTHO05D009215 4.4e-84 315.8 372 48.4
Actinidia15825 Actinidia chinensis HOM05D002927 ORTHO05D003841 7.5e-84 315.1 343 54.8
A02p23560 Brassica napus HOM05D007289 ORTHO05D009215 8.3e-83 311.6 370 49.2
BraA02t07349Z Brassica rapa HOM05D007289 ORTHO05D009215 8.3e-83 311.6 370 49.2
Migut.I00845 Erythranthe guttata HOM05D007289 ORTHO05D009215 2.4e-82 310.1 365 48.8
HanXRQChr16g0501051 Helianthus annuus HOM05D007289 ORTHO05D009215 9.1e-82 308.1 370 49.5
Nn8g39279 Nelumbo nucifera HOM05D007289 ORTHO05D009215 2.3e-80 303.5 330 52.7
ClCG09G002310 Citrullus lanatus HOM05D007289 ORTHO05D009215 2.9e-80 303.1 175 86.9
BcaB05g25270 Brassica carinata HOM05D002927 ORTHO05D003841 5.5e-79 298.9 366 47.5
ECA232G0523 Erigeron canadensis HOM05D007289 ORTHO05D009215 9.5e-79 298.1 383 47.3
EL10Ac9g21988 Beta vulgaris HOM05D007289 ORTHO05D009215 1.0e-77 294.7 458 42.4
ClCG09G002320 Citrullus lanatus HOM05D007289 ORTHO05D009215 2.0e-76 290.4 263 65.4
Duzib235G0864 Durio zibethinus HOM05D007289 ORTHO05D009215 8.3e-75 285.0 385 46.2
CDE02G4373 Ceratophyllum demersum HOM05D004733 ORTHO05D005925 2.4e-74 283.5 397 45.3
ATR0037G063 Amborella trichopoda HOM05D007289 ORTHO05D009215 1.5e-71 274.2 415 41.4
PSO339G0085 Papaver somniferum HOM05D007289 ORTHO05D009215 2.5e-71 273.5 273 52.7
SalBow2G1977 Salvia bowleyana HOM05D007289 ORTHO05D009215 4.9e-67 259.2 371 43.4
Haze_16457 Corylus avellana HOM05D007289 ORTHO05D009215 5.0e-64 249.2 397 40.1
Cpa.g.sc10.164 Carica papaya HOM05D007289 ORTHO05D009215 8.6e-64 248.4 289 48.8
SEGI_14605 Sequoiadendron giganteum HOM05D007289 ORTHO05D009215 5.2e-61 239.2 379 41.2
Glyma.15G013100 Glycine max HOM05D007289 ORTHO05D009215 6.8e-61 238.8 245 52.2
HPP92_000676 Vanilla planifolia HOM05D007289 ORTHO05D009215 6.4e-59 232.3 271 47.6
Gohir.D03G073900 Gossypium hirsutum HOM05D007289 ORTHO05D009215 2.1e-54 217.2 180 61.7
Pp3c15_20480 Physcomitrium patens HOM05D007289 ORTHO05D009215 8.1e-54 215.3 311 40.5
FAN05G4871 Fragaria x ananassa HOM05D007289 ORTHO05D009215 1.4e-45 188.0 155 63.2
Mapoly0044s0047 Marchantia polymorpha HOM05D007289 ORTHO05D009215 3.4e-44 183.3 360 34.4
FAN05G4017 Fragaria x ananassa HOM05D007289 ORTHO05D009215 3.8e-43 179.9 197 54.3
Eucgr.F03006 Eucalyptus grandis HOM05D007289 ORTHO05D009215 1.6e-41 174.5 220 45.9
Nitab4.5_0021849g0010 Nicotiana tabacum HOM05D007289 ORTHO05D009215 5.3e-37 159.5 204 46.1
SEGI_13111 Sequoiadendron giganteum HOM05D007289 ORTHO05D009215 1.2e-36 158.3 169 50.9
unitig_21.g20513 Utricularia gibba HOM05D007289 ORTHO05D009215 1.4e-34 151.4 384 34.1
Zm00001eb377280 Zea mays HOM05D007289 ORTHO05D009215 1.9e-34 151.0 203 43.3
CBR_g23739 Chara braunii HOM05D007289 ORTHO05D009215 2.7e-33 147.1 98 62.2
TWI12G0812 Tripterygium wilfordii HOM05D007289 ORTHO05D009215 3.9e-32 143.3 160 51.9
Lj2P1136T43 Lonicera japonica HOM05D007289 ORTHO05D009215 6.0e-25 119.4 110 54.5
Hma1.2p1_0845F.1_g227540 Hydrangea macrophylla HOM05D007289 ORTHO05D009215 3.0e-24 117.1 133 50.4
Ah.01g011120 Amaranthus hybridus HOM05D007289 ORTHO05D009215 6.5e-19 99.4 145 44.1
Pp3c21_18730 Physcomitrium patens HOM05D007289 ORTHO05D009215 3.3e-07 60.5 146 28.8


User provided reference genes

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