Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc07g0005590 Simmondsia chinensis HOM05D003387 ORTHO05D011165 2.1e-80 302.4 158 100.0
Sc07g0005580 Simmondsia chinensis HOM05D003387 ORTHO05D011165 5.7e-78 294.3 158 97.5
Sc12g0007970 Simmondsia chinensis HOM05D003387 ORTHO05D011165 2.6e-30 136.0 135 54.1
Sc15g0003120 Simmondsia chinensis HOM05D003387 ORTHO05D011165 8.6e-26 120.9 95 64.2
Sc16g0004730 Simmondsia chinensis HOM05D003387 ORTHO05D011165 1.3e-21 107.1 91 63.7
Sc26g0003450 Simmondsia chinensis HOM05D031019 ORTHO05D011165 2.7e-19 99.4 130 41.5
Sc16g0004600 Simmondsia chinensis HOM05D008654 ORTHO05D011165 2.5e-17 92.8 115 42.6
Sc13g0008890 Simmondsia chinensis HOM05D031019 ORTHO05D011165 4.3e-17 92.0 115 41.7
Sc21g0004200 Simmondsia chinensis HOM05D012448 ORTHO05D011165 9.5e-17 90.9 81 59.3
Sc04g0006840 Simmondsia chinensis HOM05D003387 ORTHO05D011165 3.1e-15 85.9 80 53.8
Sc22g0004350 Simmondsia chinensis HOM05D028099 ORTHO05D011165 1.1e-12 77.4 80 48.8
Sc18g0004320 Simmondsia chinensis HOM05D031019 ORTHO05D011165 1.9e-12 76.6 124 37.1
Sc09g0007220 Simmondsia chinensis HOM05D003387 ORTHO05D011165 4.1e-12 75.5 79 53.2
Sc02g0004440 Simmondsia chinensis HOM05D003387 ORTHO05D011165 7.1e-12 74.7 85 42.4
Sc16g0004050 Simmondsia chinensis HOM05D003387 ORTHO05D005400 1.2e-11 73.9 87 48.3
Sc20g0003080 Simmondsia chinensis HOM05D012448 ORTHO05D011165 7.8e-11 71.2 79 40.5
Sc04g0003810 Simmondsia chinensis HOM05D012448 ORTHO05D011165 1.3e-10 70.5 80 41.2
Sc01g0004380 Simmondsia chinensis HOM05D031019 ORTHO05D011165 8.6e-10 67.8 121 36.4
Sc07g0004700 Simmondsia chinensis HOM05D012448 ORTHO05D011165 8.6e-10 67.8 80 38.8
Hund19618 Selenicereus undatus HOM05D003387 ORTHO05D005400 1.1e-09 67.4 87 43.7
Ah.02g123810 Amaranthus hybridus HOM05D003387 ORTHO05D005400 1.9e-09 66.6 89 41.6
Eucgr.F02695 Eucalyptus grandis HOM05D003387 ORTHO05D005400 1.9e-09 66.6 87 44.8
Nn1g06041 Nelumbo nucifera HOM05D003387 ORTHO05D005400 1.9e-09 66.6 87 46.0
PSO700G0143 Papaver somniferum HOM05D003387 ORTHO05D005400 1.9e-09 66.6 87 43.7
vmacro01482 Vaccinium macrocarpon HOM05D003387 ORTHO05D005400 1.9e-09 66.6 87 43.7
EL10Ac6g15237 Beta vulgaris HOM05D003387 ORTHO05D005400 2.5e-09 66.2 87 41.4
Sc07g0005070 Simmondsia chinensis HOM05D003387 ORTHO05D011165 2.5e-09 66.2 83 39.8
arahy.Tifrunner.gnm1.ann1.9CFF48 Arachis hypogaea HOM05D003387 ORTHO05D005400 3.3e-09 65.9 87 43.7
arahy.Tifrunner.gnm1.ann1.K61U57 Arachis hypogaea HOM05D003387 ORTHO05D005400 3.3e-09 65.9 87 43.7
arahy.Tifrunner.gnm1.ann1.LGJ4PH Arachis hypogaea HOM05D003387 ORTHO05D005400 3.3e-09 65.9 87 43.7
arahy.Tifrunner.gnm1.ann1.RF14FM Arachis hypogaea HOM05D003387 ORTHO05D005400 3.3e-09 65.9 87 43.7
Sc03g0006450 Simmondsia chinensis HOM05D008654 ORTHO05D011165 3.3e-09 65.9 91 38.5
GSVIVG01034558001 Vitis vinifera HOM05D003387 ORTHO05D005400 3.3e-09 65.9 87 43.7
CSS0049572 Camellia sinensis var. sinensis HOM05D003387 ORTHO05D005400 4.3e-09 65.5 96 41.7
CiPaw.15G014400 Carya illinoinensis HOM05D003387 ORTHO05D005400 4.3e-09 65.5 96 40.6
ECA232G0053 Erigeron canadensis HOM05D003387 ORTHO05D005400 4.3e-09 65.5 87 42.5
Lsat_1_v5_gn_9_41940 Lactuca sativa HOM05D003387 ORTHO05D005400 4.3e-09 65.5 96 41.7
CiPaw.16G009800 Carya illinoinensis HOM05D003387 ORTHO05D005400 5.6e-09 65.1 98 39.8
Glyma.02G080500 Glycine max HOM05D003387 ORTHO05D005400 5.6e-09 65.1 94 40.4
Glyma.16G165000 Glycine max HOM05D003387 ORTHO05D005400 5.6e-09 65.1 94 40.4
Nn5g28791 Nelumbo nucifera HOM05D003387 ORTHO05D005400 5.6e-09 65.1 87 44.8
Phvul.004G092400 Phaseolus vulgaris HOM05D003387 ORTHO05D005400 5.6e-09 65.1 94 40.4
SalBow1G1267 Salvia bowleyana HOM05D003387 ORTHO05D005400 7.3e-09 64.7 93 40.9
Zm00001eb348540 Zea mays HOM05D003387 ORTHO05D005400 7.3e-09 64.7 86 46.5
Aqoxy2G00397 Aquilegia oxysepala HOM05D003387 ORTHO05D005400 9.5e-09 64.3 87 43.7
CSS0039159 Camellia sinensis var. sinensis HOM05D003387 ORTHO05D005400 9.5e-09 64.3 87 43.7
HanXRQChr05g0144181 Helianthus annuus HOM05D003387 ORTHO05D005400 9.5e-09 64.3 87 42.5
Potri.002G066000 Populus trichocarpa HOM05D003387 ORTHO05D005400 9.5e-09 64.3 96 41.7
Sc14g0005430 Simmondsia chinensis HOM05D012448 ORTHO05D011165 9.5e-09 64.3 80 38.8
TAR376G0277 Trochodendron aralioides HOM05D003387 ORTHO05D005400 9.5e-09 64.3 87 43.7
CANSAT25G0465 Cannabis sativa HOM05D003387 ORTHO05D005400 1.2e-08 63.9 87 43.7
Ca_04511_v3 Cicer arietinum L. HOM05D003387 ORTHO05D005400 1.2e-08 63.9 87 42.5
PSO541G1407 Papaver somniferum HOM05D003387 ORTHO05D005400 1.2e-08 63.9 89 41.6
PSO675G7282 Papaver somniferum HOM05D003387 ORTHO05D005400 1.2e-08 63.9 89 41.6
Prupe.8G036700 Prunus persica HOM05D003387 ORTHO05D005400 1.2e-08 63.9 87 43.7
Sc03g0005120 Simmondsia chinensis HOM05D015224 ORTHO05D011165 1.2e-08 63.9 106 35.8
THA.LOC104804671 Tarenaya hassleriana HOM05D003387 ORTHO05D005400 1.2e-08 63.9 87 43.7
VMungo0464G0875 Vigna mungo HOM05D003387 ORTHO05D005400 1.2e-08 63.9 94 39.4
Cfa002795 Carpinus fangiana HOM05D003387 ORTHO05D005400 1.6e-08 63.5 87 44.8
Ciclev10001148m.g Citrus clementina HOM05D003387 ORTHO05D005400 1.6e-08 63.5 87 42.5
Migut.K00003 Erythranthe guttata HOM05D003387 ORTHO05D005400 1.6e-08 63.5 96 39.6
FvH4_2g13280 Fragaria vesca HOM05D003387 ORTHO05D005400 1.6e-08 63.5 87 42.5
FAN20G0358 Fragaria x ananassa HOM05D003387 ORTHO05D005400 1.6e-08 63.5 87 42.5
FAN24G3173 Fragaria x ananassa HOM05D003387 ORTHO05D005400 1.6e-08 63.5 87 42.5
MD04G1044700 Malus domestica HOM05D003387 ORTHO05D005400 1.6e-08 63.5 87 42.5
QL02p037738 Quercus lobata HOM05D003387 ORTHO05D005400 1.6e-08 63.5 96 39.6
QL02p038708 Quercus lobata HOM05D003387 ORTHO05D005400 1.6e-08 63.5 96 39.6
RcHm_v2.0_Chr6g0274691 Rosa chinensis HOM05D003387 ORTHO05D005400 1.6e-08 63.5 87 42.5
TWI34G1705 Tripterygium wilfordii HOM05D003387 ORTHO05D005400 1.6e-08 63.5 87 42.5
TAR628G0869 Trochodendron aralioides HOM05D003387 ORTHO05D005400 1.6e-08 63.5 78 44.9
Manes.18G093400 Manihot esculenta HOM05D003387 ORTHO05D005400 2.1e-08 63.2 87 42.5
Os01g0867800 Oryza sativa ssp. japonica HOM05D003387 ORTHO05D005400 2.1e-08 63.2 86 44.2
Psat1g100400 Pisum sativum HOM05D003387 ORTHO05D005400 2.1e-08 63.2 87 40.2
Zm00001eb289150 Zea mays HOM05D003387 ORTHO05D005400 2.1e-08 63.2 86 45.3
Gohir.A02G063500 Gossypium hirsutum HOM05D003387 ORTHO05D005400 2.8e-08 62.8 78 43.6
Gohir.D02G069100 Gossypium hirsutum HOM05D003387 ORTHO05D005400 2.8e-08 62.8 78 43.6
Gorai.005G078200 Gossypium raimondii HOM05D003387 ORTHO05D005400 2.8e-08 62.8 78 43.6
Lalb_Chr02g0141481 Lupinus albus HOM05D003387 ORTHO05D005400 2.8e-08 62.8 93 39.8
Sed0017554 Sechium edule HOM05D003387 ORTHO05D005400 2.8e-08 62.8 87 43.7
Ah.05g168100 Amaranthus hybridus HOM05D003387 ORTHO05D005400 3.6e-08 62.4 87 43.7
ATR0115G003 Amborella trichopoda HOM05D003387 ORTHO05D005400 3.6e-08 62.4 86 43.0
BcaB04g17624 Brassica carinata HOM05D003387 ORTHO05D005400 3.6e-08 62.4 87 40.2
Carub.0001s3449 Capsella rubella HOM05D003387 ORTHO05D005400 3.6e-08 62.4 87 40.2
Cfa018305 Carpinus fangiana HOM05D003387 ORTHO05D005400 3.6e-08 62.4 96 39.6
CDE06G0083 Ceratophyllum demersum HOM05D003387 ORTHO05D005400 3.6e-08 62.4 87 41.4
Dinv25885 Davidia involucrata HOM05D003387 ORTHO05D005400 3.6e-08 62.4 87 42.5
Duzib093G0739 Durio zibethinus HOM05D003387 ORTHO05D005400 3.6e-08 62.4 78 43.6
Eucgr.F04205 Eucalyptus grandis HOM05D003387 ORTHO05D005400 3.6e-08 62.4 98 39.8
Sc21g0003950 Simmondsia chinensis HOM05D015224 ORTHO05D011165 3.6e-08 62.4 95 42.1
THA.LOC104809206 Tarenaya hassleriana HOM05D003387 ORTHO05D005400 3.6e-08 62.4 87 42.5
AagrBONN_evm.TU.Sc2ySwM_368.3328 Anthoceros agrestis HOM05D003387 ORTHO05D005400 4.7e-08 62.0 87 42.5
FAN15G3239 Fragaria x ananassa HOM05D003387 ORTHO05D005400 4.7e-08 62.0 87 41.4
Lj7C377G3 Lonicera japonica HOM05D003387 ORTHO05D005400 4.7e-08 62.0 87 41.4
Lj2g0008478 Lotus japonicus HOM05D003387 ORTHO05D005400 4.7e-08 62.0 97 39.2
Os05g0437300 Oryza sativa ssp. japonica HOM05D003387 ORTHO05D005400 4.7e-08 62.0 86 45.3
Sabra02G0052700 Salix brachista HOM05D003387 ORTHO05D005400 4.7e-08 62.0 96 40.6
GSVIVG01022282001 Vitis vinifera HOM05D003387 ORTHO05D005400 4.7e-08 62.0 87 42.5
Atru.chr13.2064 Acer truncatum HOM05D003387 ORTHO05D005400 6.2e-08 61.6 87 41.4
BcaC07g37311 Brassica carinata HOM05D003387 ORTHO05D005400 6.2e-08 61.6 87 40.2
A08p06460 Brassica napus HOM05D003387 ORTHO05D005400 6.2e-08 61.6 87 40.2
C08p07450 Brassica napus HOM05D003387 ORTHO05D005400 6.2e-08 61.6 87 40.2
BolC8t47590H Brassica oleracea HOM05D003387 ORTHO05D005400 6.2e-08 61.6 87 40.2
BraA08t32655Z Brassica rapa HOM05D003387 ORTHO05D005400 6.2e-08 61.6 87 40.2
ClCG08G002590 Citrullus lanatus HOM05D003387 ORTHO05D005400 6.2e-08 61.6 87 42.5
MELO3C024993.2 Cucumis melo HOM05D003387 ORTHO05D005400 6.2e-08 61.6 87 42.5
CsaV3_6G002770 Cucumis sativus L. HOM05D003387 ORTHO05D005400 6.2e-08 61.6 87 42.5
Thhalv10004261m.g Eutrema salsugineum HOM05D003387 ORTHO05D005400 6.2e-08 61.6 87 40.2
Medtr6g043520 Medicago truncatula HOM05D003387 ORTHO05D005400 6.2e-08 61.6 87 39.1
PGR042G1308 Punica granatum HOM05D003387 ORTHO05D005400 6.2e-08 61.6 87 41.4
Solyc10g080720.2 Solanum lycopersicum HOM05D003387 ORTHO05D005400 6.2e-08 61.6 87 44.8
Thecc.08G155500 Theobroma cacao HOM05D003387 ORTHO05D005400 6.2e-08 61.6 78 43.6
Ca_10675_v3 Cicer arietinum L. HOM05D003387 ORTHO05D005400 8.1e-08 61.2 87 42.5
MBI16_g07738_MAGBIO Magnolia biondii HOM05D003387 ORTHO05D005400 8.1e-08 61.2 78 43.6
QL06p031237 Quercus lobata HOM05D003387 ORTHO05D005400 8.1e-08 61.2 87 44.8
Sp1g32390 Schrenkiella parvula HOM05D003387 ORTHO05D005400 8.1e-08 61.2 87 39.1
PGSC0003DMG400023660 Solanum tuberosum HOM05D003387 ORTHO05D005400 8.1e-08 61.2 87 43.7
TWI60G0696 Tripterygium wilfordii HOM05D003387 ORTHO05D005400 8.1e-08 61.2 87 41.4
ATR1126G056 Amborella trichopoda HOM05D003387 ORTHO05D005400 1.1e-07 60.8 78 42.3
Cc04_g09690 Coffea canephora HOM05D003387 ORTHO05D005400 1.1e-07 60.8 96 39.6
Haze_25093 Corylus avellana HOM05D003387 ORTHO05D005400 1.1e-07 60.8 87 43.7
DCAR_014445 Daucus carota HOM05D003387 ORTHO05D005400 1.1e-07 60.8 87 40.2
Lj5g0027187 Lotus japonicus HOM05D003387 ORTHO05D005400 1.1e-07 60.8 87 41.4
Lalb_Chr19g0130201 Lupinus albus HOM05D003387 ORTHO05D005400 1.1e-07 60.8 78 42.3
Psat6g192160 Pisum sativum HOM05D003387 ORTHO05D005400 1.1e-07 60.8 87 42.5
Potri.005G194700 Populus trichocarpa HOM05D003387 ORTHO05D005400 1.1e-07 60.8 96 39.6
Sopen10g031260 Solanum pennellii HOM05D003387 ORTHO05D005400 1.1e-07 60.8 87 43.7
TPR.G17034 Trifolium pratense HOM05D003387 ORTHO05D005400 1.1e-07 60.8 87 42.5
Aa31LG6G9950 Aethionema arabicum HOM05D003387 ORTHO05D005400 1.4e-07 60.5 87 40.2
AL1G51590 Arabidopsis lyrata HOM05D003387 ORTHO05D005400 1.4e-07 60.5 87 40.2
AT1G43190 Arabidopsis thaliana HOM05D003387 ORTHO05D005400 1.4e-07 60.5 87 40.2
CiPaw.04G088200 Carya illinoinensis HOM05D003387 ORTHO05D005400 1.4e-07 60.5 87 42.5
Glyma.10G223300 Glycine max HOM05D003387 ORTHO05D005400 1.4e-07 60.5 87 40.2
Glyma.20G168400 Glycine max HOM05D003387 ORTHO05D005400 1.4e-07 60.5 87 40.2
Manes.02G181600 Manihot esculenta HOM05D003387 ORTHO05D005400 1.4e-07 60.5 96 39.6
TPR.G28008 Trifolium pratense HOM05D003387 ORTHO05D005400 1.4e-07 60.5 87 39.1
CARHR035330 Cardamine hirsuta HOM05D003387 ORTHO05D005400 1.8e-07 60.1 87 39.1
Medtr1g098530 Medicago truncatula HOM05D003387 ORTHO05D005400 1.8e-07 60.1 87 42.5
Pp3c14_14100 Physcomitrium patens HOM05D003387 ORTHO05D005400 1.8e-07 60.1 87 41.4
Sc03g0007670 Simmondsia chinensis HOM05D012448 ORTHO05D011165 1.8e-07 60.1 85 40.0
Sc25g0003800 Simmondsia chinensis HOM05D003387 ORTHO05D011165 1.8e-07 60.1 79 36.7
HPP92_002768 Vanilla planifolia HOM05D003387 ORTHO05D005400 1.8e-07 60.1 87 41.4
Mapoly0001s0481 Marchantia polymorpha HOM05D003387 ORTHO05D005400 2.3e-07 59.7 87 41.4
Sed0013690 Sechium edule HOM05D003387 ORTHO05D005400 2.3e-07 59.7 87 42.5
SEGI_27673 Sequoiadendron giganteum HOM05D003387 ORTHO05D005400 2.3e-07 59.7 87 40.2
Sopen12g010100 Solanum pennellii HOM05D003387 ORTHO05D005400 2.3e-07 59.7 87 40.2
PGSC0003DMG400018824 Solanum tuberosum HOM05D003387 ORTHO05D005400 2.3e-07 59.7 87 40.2
VMungo0720G1662 Vigna mungo HOM05D003387 ORTHO05D005400 2.3e-07 59.7 87 41.4
Duzib116G0668 Durio zibethinus HOM05D003387 ORTHO05D005400 3.1e-07 59.3 78 42.3
Lalb_Chr06g0161681 Lupinus albus HOM05D003387 ORTHO05D005400 3.1e-07 59.3 87 39.1
Lalb_Chr21g0305541 Lupinus albus HOM05D003387 ORTHO05D005400 3.1e-07 59.3 87 39.1
Peaxi162Scf00076g00821 Petunia axillaris HOM05D003387 ORTHO05D005400 3.1e-07 59.3 96 38.5
Phvul.007G081900 Phaseolus vulgaris HOM05D003387 ORTHO05D005400 3.1e-07 59.3 87 40.2
Pp3c14_17110 Physcomitrium patens HOM05D003387 ORTHO05D005400 3.1e-07 59.3 87 41.4
Sabra05G0148200 Salix brachista HOM05D003387 ORTHO05D005400 3.1e-07 59.3 89 41.6
SGA_v2.0_scaffold274G46519 Striga asiatica HOM05D003387 ORTHO05D005400 4.0e-07 58.9 84 40.5
Actinidia10635 Actinidia chinensis HOM05D003387 ORTHO05D005400 5.2e-07 58.5 87 41.4
SMO146G0032 Selaginella moellendorffii HOM05D003387 ORTHO05D005400 5.2e-07 58.5 89 38.2
Sc09g0006000 Simmondsia chinensis HOM05D015224 ORTHO05D388293 6.8e-07 58.2 127 29.9
CBR_g7995 Chara braunii HOM05D003387 ORTHO05D005400 8.9e-07 57.8 87 40.2
Sc25g0001610 Simmondsia chinensis HOM05D015224 ORTHO05D011165 8.9e-07 57.8 69 42.0
Sc11g0003900 Simmondsia chinensis HOM05D015224 ORTHO05D011165 1.5e-06 57.0 85 37.6
Medtr6g037550 Medicago truncatula HOM05D003387 ORTHO05D005400 2.6e-06 56.2 87 39.1
Hund26682 Selenicereus undatus HOM05D003387 ORTHO05D005400 2.6e-06 56.2 78 39.7
Sc09g0006480 Simmondsia chinensis HOM05D012448 ORTHO05D011165 2.6e-06 56.2 80 40.0
Sc26g0003240 Simmondsia chinensis HOM05D012448 ORTHO05D011165 2.6e-06 56.2 145 29.7
Sc12g0007940 Simmondsia chinensis HOM05D012448 ORTHO05D011165 3.4e-06 55.8 123 30.9
Sc18g0004540 Simmondsia chinensis HOM05D012448 ORTHO05D011165 3.4e-06 55.8 78 38.5
Os02g0789700 Oryza sativa ssp. japonica HOM05D003387 ORTHO05D011165 9.9e-06 54.3 76 36.8
PSO170G1597 Papaver somniferum HOM05D003387 ORTHO05D005400 9.9e-06 54.3 109 33.0
Sc12g0007750 Simmondsia chinensis HOM05D015224 ORTHO05D011165 9.9e-06 54.3 102 34.3


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