Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc07g0001260 Simmondsia chinensis HOM05D006371 ORTHO05D008309 0.0e+00 1828.1 926 100.0
EL10Ac6g13348 Beta vulgaris HOM05D006371 ORTHO05D008309 1.4e-296 1023.1 960 60.5
AUR62039632 Chenopodium quinoa HOM05D006371 ORTHO05D008309 4.5e-292 1008.1 948 60.5
Ah.02g129050 Amaranthus hybridus HOM05D006371 ORTHO05D008309 1.4e-280 969.9 868 62.9
Dinv40160 Davidia involucrata HOM05D006371 ORTHO05D008309 1.5e-279 966.5 951 59.1
AUR62040011 Chenopodium quinoa HOM05D006371 ORTHO05D008309 1.3e-278 963.4 898 60.8
QL04p067039 Quercus lobata HOM05D006371 ORTHO05D008309 2.2e-270 936.0 961 55.9
Actinidia02362 Actinidia chinensis HOM05D006371 ORTHO05D008309 3.7e-270 935.3 970 56.7
Cfa014202 Carpinus fangiana HOM05D006371 ORTHO05D008309 1.2e-265 920.2 967 55.6
CiPaw.03G283700 Carya illinoinensis HOM05D006371 ORTHO05D008309 8.0e-265 917.5 960 55.5
GSVIVG01030124001 Vitis vinifera HOM05D006371 ORTHO05D008309 1.3e-262 910.2 941 56.4
MD09G1130200 Malus domestica HOM05D006371 ORTHO05D008309 2.8e-262 909.1 946 56.1
Nn1g07560 Nelumbo nucifera HOM05D006371 ORTHO05D008309 1.1e-261 907.1 970 54.4
Hund03659 Selenicereus undatus HOM05D006371 ORTHO05D008309 1.6e-260 903.3 975 54.5
Prupe.3G194900 Prunus persica HOM05D006371 ORTHO05D008309 2.0e-260 902.9 949 55.7
Eucgr.A01367 Eucalyptus grandis HOM05D006371 ORTHO05D008309 1.7e-259 899.8 973 54.4
Manes.12G064500 Manihot esculenta HOM05D006371 ORTHO05D008309 2.9e-259 899.0 961 53.7
Ciclev10014166m.g Citrus clementina HOM05D006371 ORTHO05D008309 3.8e-259 898.7 960 55.1
Gohir.A11G148000 Gossypium hirsutum HOM05D006371 ORTHO05D008309 5.0e-259 898.3 956 56.4
Gorai.007G165100 Gossypium raimondii HOM05D006371 ORTHO05D008309 8.6e-259 897.5 952 56.6
CSS0032100 Camellia sinensis var. sinensis HOM05D006371 ORTHO05D008309 2.5e-258 896.0 956 55.4
Dinv08538 Davidia involucrata HOM05D006371 ORTHO05D008309 3.3e-258 895.6 882 58.7
Gohir.D11G154800 Gossypium hirsutum HOM05D006371 ORTHO05D008309 1.0e-256 890.6 952 56.4
TWI36G0955 Tripterygium wilfordii HOM05D006371 ORTHO05D008309 1.8e-256 889.8 966 55.8
FAN14G0004 Fragaria x ananassa HOM05D006371 ORTHO05D008309 3.0e-256 889.0 950 54.6
FvH4_6g40410 Fragaria vesca HOM05D006371 ORTHO05D008309 5.2e-256 888.3 950 55.1
Duzib133G1082 Durio zibethinus HOM05D006371 ORTHO05D008309 3.7e-254 882.1 950 55.2
PGR031G1410 Punica granatum HOM05D006371 ORTHO05D008309 1.1e-253 880.6 973 53.8
RcHm_v2.0_Chr2g0155641 Rosa chinensis HOM05D006371 ORTHO05D008309 2.4e-253 879.4 952 54.5
Duzib211G0069 Durio zibethinus HOM05D006371 ORTHO05D008309 1.2e-252 877.1 956 54.7
MELO3C024185.2 Cucumis melo HOM05D006371 ORTHO05D008309 1.6e-252 876.7 958 54.2
FAN09G0519 Fragaria x ananassa HOM05D006371 ORTHO05D008309 2.0e-252 876.3 949 55.1
FAN02G4613 Fragaria x ananassa HOM05D006371 ORTHO05D008309 2.7e-252 875.9 950 53.8
FAN05G5438 Fragaria x ananassa HOM05D006371 ORTHO05D008309 2.7e-252 875.9 942 54.4
PSO541G0072 Papaver somniferum HOM05D006371 ORTHO05D008309 3.9e-251 872.1 961 53.4
CANSAT64G2089 Cannabis sativa HOM05D006371 ORTHO05D008309 2.5e-250 869.4 971 54.2
arahy.Tifrunner.gnm1.ann1.BM1T67 Arachis hypogaea HOM05D006371 ORTHO05D008309 5.6e-250 868.2 962 54.1
arahy.Tifrunner.gnm1.ann1.YIC3VW Arachis hypogaea HOM05D006371 ORTHO05D008309 5.6e-250 868.2 962 53.4
CsaV3_2G010080 Cucumis sativus L. HOM05D006371 ORTHO05D008309 7.3e-250 867.8 963 53.8
Sabra14G0129800 Salix brachista HOM05D006371 ORTHO05D008309 7.3e-250 867.8 965 52.8
Potri.014G170300 Populus trichocarpa HOM05D006371 ORTHO05D008309 1.2e-249 867.1 965 52.7
PSO675G4792 Papaver somniferum HOM05D006371 ORTHO05D008309 6.2e-249 864.8 960 52.9
Cc07_g11500 Coffea canephora HOM05D006371 ORTHO05D008309 1.4e-248 863.6 975 53.1
Glyma.14G190200 Glycine max HOM05D006371 ORTHO05D008309 2.6e-247 859.4 946 54.4
TAR627G0565 Trochodendron aralioides HOM05D006371 ORTHO05D008309 7.5e-247 857.8 870 57.0
Migut.D00896 Erythranthe guttata HOM05D006371 ORTHO05D008309 3.7e-246 855.5 935 54.9
Lj4C228G6 Lonicera japonica HOM05D006371 ORTHO05D008309 1.1e-245 854.0 999 52.1
Sed0018275 Sechium edule HOM05D006371 ORTHO05D008309 1.1e-245 854.0 812 60.6
Glyma.02G223400 Glycine max HOM05D006371 ORTHO05D008309 5.4e-245 851.7 957 53.2
Aqoxy3G02224 Aquilegia oxysepala HOM05D006371 ORTHO05D008309 3.5e-244 849.0 941 52.4
THA.LOC104808834 Tarenaya hassleriana HOM05D006371 ORTHO05D008309 6.0e-244 848.2 974 53.2
PGSC0003DMG400001545 Solanum tuberosum HOM05D006371 ORTHO05D008309 1.7e-243 846.7 972 52.6
Lalb_Chr04g0252451 Lupinus albus HOM05D006371 ORTHO05D008309 3.9e-243 845.5 955 53.3
COL.COLO4_19652 Corchorus olitorius HOM05D006371 ORTHO05D008309 5.6e-242 841.6 950 54.0
Solyc02g083140.3 Solanum lycopersicum HOM05D006371 ORTHO05D008309 5.6e-242 841.6 978 52.0
Aa31sc575G10 Aethionema arabicum HOM05D006371 ORTHO05D008309 7.3e-242 841.3 949 53.2
LjContig00155g0006571 Lotus japonicus HOM05D006371 ORTHO05D008309 9.5e-242 840.9 947 53.2
CARHR102110 Cardamine hirsuta HOM05D006371 ORTHO05D008309 3.6e-241 839.0 904 54.9
BcaB06g26772 Brassica carinata HOM05D006371 ORTHO05D008309 4.7e-241 838.6 917 53.5
SalBow7G3887 Salvia bowleyana HOM05D006371 ORTHO05D008309 1.1e-240 837.4 956 53.6
MSTRG.10896 Avicennia marina HOM05D006371 ORTHO05D008309 5.2e-240 835.1 735 63.8
Sp3g23150 Schrenkiella parvula HOM05D006371 ORTHO05D008309 5.2e-240 835.1 959 51.8
Sopen02g027900 Solanum pennellii HOM05D006371 ORTHO05D008309 8.9e-240 834.3 900 55.2
AL3G41970 Arabidopsis lyrata HOM05D006371 ORTHO05D008309 2.0e-239 833.2 904 54.5
Thhalv10002385m.g Eutrema salsugineum HOM05D006371 ORTHO05D008309 4.4e-239 832.0 962 51.8
BcaC06g35860 Brassica carinata HOM05D006371 ORTHO05D008309 5.8e-239 831.6 917 52.2
Hund03661 Selenicereus undatus HOM05D006371 ORTHO05D008309 1.1e-237 827.4 1003 51.3
BolC7t41483H Brassica oleracea HOM05D006371 ORTHO05D008309 1.4e-237 827.0 918 52.2
Carub.0003s2599 Capsella rubella HOM05D006371 ORTHO05D008309 5.4e-237 825.1 909 53.8
C07p10340 Brassica napus HOM05D006371 ORTHO05D008309 9.2e-237 824.3 918 52.1
A07p06760 Brassica napus HOM05D006371 ORTHO05D008309 1.5e-234 817.0 795 58.1
BraA07t28469Z Brassica rapa HOM05D006371 ORTHO05D008309 3.3e-234 815.8 801 57.9
Peaxi162Scf00300g00515 Petunia axillaris HOM05D006371 ORTHO05D008309 1.2e-233 813.9 966 52.0
TPR.G13852 Trifolium pratense HOM05D006371 ORTHO05D008309 8.1e-233 811.2 924 51.3
Thecc.01G199300 Theobroma cacao HOM05D006371 ORTHO05D008309 1.4e-232 810.4 954 52.6
AT2G04270 Arabidopsis thaliana HOM05D006371 ORTHO05D008309 3.1e-232 809.3 694 64.1
CAN.G890.8 Capsicum annuum HOM05D006371 ORTHO05D008309 4.4e-231 805.4 716 62.3
HanXRQChr09g0256951 Helianthus annuus HOM05D006371 ORTHO05D008309 3.8e-230 802.4 933 51.8
Ca_05557_v3 Cicer arietinum L. HOM05D006371 ORTHO05D008309 1.9e-229 800.0 953 49.6
ATR0751G221 Amborella trichopoda HOM05D006371 ORTHO05D008309 9.2e-229 797.7 984 50.1
ECA232G0409 Erigeron canadensis HOM05D006371 ORTHO05D008309 7.8e-228 794.7 889 52.4
Nitab4.5_0005413g0050 Nicotiana tabacum HOM05D006371 ORTHO05D008309 7.8e-228 794.7 902 52.5
ECA238G3451 Erigeron canadensis HOM05D006371 ORTHO05D008309 9.6e-226 787.7 832 55.6
Lsat_1_v5_gn_4_142580 Lactuca sativa HOM05D006371 ORTHO05D008309 9.6e-226 787.7 958 51.1
Psat2g060760 Pisum sativum HOM05D006371 ORTHO05D008309 1.5e-223 780.4 946 49.4
HPP92_003032 Vanilla planifolia HOM05D006371 ORTHO05D008309 3.0e-219 766.1 957 48.8
Medtr5g069430 Medicago truncatula HOM05D006371 ORTHO05D008309 3.6e-217 759.2 949 48.6
Zm00001eb038720 Zea mays HOM05D006371 ORTHO05D008309 5.4e-213 745.3 685 59.4
Os08g0323600 Oryza sativa ssp. japonica HOM05D006371 ORTHO05D008309 2.1e-212 743.4 974 46.4
SGA_v2.0_scaffold68G22808 Striga asiatica HOM05D006371 ORTHO05D008309 1.3e-201 707.6 943 47.7
Cpa.g.sc136.51 Carica papaya HOM05D006371 ORTHO05D008309 4.0e-200 702.6 588 64.3
Oeu049652.2 Olea europaea HOM05D006371 ORTHO05D008309 4.0e-200 702.6 1074 44.4
unitig_748.g7080 Utricularia gibba HOM05D006371 ORTHO05D005825 5.3e-192 675.6 681 57.3
MBI15_g38530_MAGBIO Magnolia biondii HOM05D006371 ORTHO05D008309 8.5e-182 641.7 781 51.0
Hma1.2p1_0315F.1_g122770 Hydrangea macrophylla HOM05D006371 ORTHO05D008309 5.9e-175 619.0 727 52.4
ClCG02G003000 Citrullus lanatus HOM05D006371 ORTHO05D008309 7.2e-173 612.1 789 49.7
Mapoly0111s0056 Marchantia polymorpha HOM05D006371 ORTHO05D008309 2.8e-161 573.5 705 47.7
vmacro20507 Vaccinium macrocarpon HOM05D006371 ORTHO05D008309 2.8e-161 573.5 1055 40.4
Phvul.008G190000 Phaseolus vulgaris HOM05D006371 ORTHO05D008309 5.3e-160 569.3 548 60.8
DCAR_023137 Daucus carota HOM05D006371 ORTHO05D008309 7.7e-159 565.5 717 50.9
Nitab4.5_0023804g0010 Nicotiana tabacum HOM05D006371 ORTHO05D008309 5.5e-157 559.3 693 49.8
CDE02G2282 Ceratophyllum demersum HOM05D006371 ORTHO05D008309 2.0e-154 550.8 761 45.6
Pp3c4_14910 Physcomitrium patens HOM05D006371 ORTHO05D008309 8.3e-145 518.8 681 43.5
Atru.chr6.3429 Acer truncatum HOM05D006371 ORTHO05D008309 1.4e-139 501.5 706 47.0
Rhsim10G0203500 Rhododendron simsii HOM05D006371 ORTHO05D008309 2.0e-138 497.7 1015 37.9
SMO117G0275 Selaginella moellendorffii HOM05D006371 ORTHO05D008309 8.6e-134 482.3 550 50.4
AagrBONN_evm.TU.Sc2ySwM_368.983 Anthoceros agrestis HOM05D006371 ORTHO05D008309 5.2e-131 473.0 683 44.2
Haze_12588 Corylus avellana HOM05D006371 ORTHO05D008309 3.5e-127 460.3 667 45.1
Haze_12589 Corylus avellana HOM05D006371 ORTHO05D008309 5.1e-86 323.6 261 67.8
SEGI_21719 Sequoiadendron giganteum HOM05D006371 ORTHO05D008309 3.2e-64 251.1 210 63.3
AUR62026198 Chenopodium quinoa HOM05D006371 ORTHO05D008309 6.1e-63 246.9 230 62.6
Ca_28887_v3 Cicer arietinum L. HOM05D006371 ORTHO05D008309 3.2e-48 198.0 452 30.3
MD17G1105600 Malus domestica HOM05D006371 ORTHO05D008309 5.7e-45 187.2 197 57.4
MCO12G287 Micromonas commoda HOM05D006371 ORTHO05D008309 1.5e-40 172.6 317 34.1
SEGI_30134 Sequoiadendron giganteum HOM05D006371 ORTHO05D008309 1.0e-25 123.2 300 32.0
CBR_g28919 Chara braunii HOM05D006371 ORTHO05D000048 4.0e-22 111.3 123 51.2
SEGI_19700 Sequoiadendron giganteum HOM05D006371 ORTHO05D008309 1.1e-19 103.2 74 68.9
CBR_g28910 Chara braunii HOM05D000019 ORTHO05D000048 1.1e-16 93.2 101 51.5
AUR62026199 Chenopodium quinoa HOM05D000691 ORTHO05D000378 7.3e-16 90.5 138 43.5
CBR_g28922 Chara braunii HOM05D000019 ORTHO05D000048 3.6e-15 88.2 244 30.7
MD17G1105400 Malus domestica HOM05D006371 ORTHO05D008309 1.3e-12 79.7 82 48.8
MD17G1105500 Malus domestica HOM05D006371 ORTHO05D008309 2.7e-10 72.0 41 87.8
AUR62026201 Chenopodium quinoa HOM05D006371 ORTHO05D008309 1.7e-09 69.3 38 92.1


User provided reference genes

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