Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow7G3887 Salvia bowleyana HOM05D006371 ORTHO05D008309 0.0e+00 1832.8 929 100.0
Migut.D00896 Erythranthe guttata HOM05D006371 ORTHO05D008309 0.0e+00 1239.9 944 69.7
MSTRG.10896 Avicennia marina HOM05D006371 ORTHO05D008309 7.4e-295 1017.3 762 72.6
Dinv40160 Davidia involucrata HOM05D006371 ORTHO05D008309 2.6e-292 1008.8 979 60.3
Actinidia02362 Actinidia chinensis HOM05D006371 ORTHO05D008309 2.1e-289 999.2 959 60.0
Cc07_g11500 Coffea canephora HOM05D006371 ORTHO05D008309 1.8e-288 996.1 961 59.9
CSS0032100 Camellia sinensis var. sinensis HOM05D006371 ORTHO05D008309 4.5e-276 954.9 758 69.5
SGA_v2.0_scaffold68G22808 Striga asiatica HOM05D006371 ORTHO05D008309 7.7e-276 954.1 968 56.9
Solyc02g083140.3 Solanum lycopersicum HOM05D006371 ORTHO05D008309 4.9e-270 934.9 970 57.1
PGSC0003DMG400001545 Solanum tuberosum HOM05D006371 ORTHO05D008309 1.2e-268 930.2 972 56.8
Sopen02g027900 Solanum pennellii HOM05D006371 ORTHO05D008309 7.8e-268 927.5 971 57.1
CiPaw.03G283700 Carya illinoinensis HOM05D006371 ORTHO05D008309 8.9e-264 914.1 826 62.5
Peaxi162Scf00300g00515 Petunia axillaris HOM05D006371 ORTHO05D008309 4.9e-262 908.3 1053 53.3
Lj4C228G6 Lonicera japonica HOM05D006371 ORTHO05D008309 8.3e-262 907.5 998 54.1
Cfa014202 Carpinus fangiana HOM05D006371 ORTHO05D008309 1.7e-259 899.8 855 60.4
Nitab4.5_0005413g0050 Nicotiana tabacum HOM05D006371 ORTHO05D008309 7.3e-258 894.4 977 54.9
Duzib211G0069 Durio zibethinus HOM05D006371 ORTHO05D008309 1.2e-257 893.6 765 64.4
Nn1g07560 Nelumbo nucifera HOM05D006371 ORTHO05D008309 1.6e-257 893.3 878 59.8
QL04p067039 Quercus lobata HOM05D006371 ORTHO05D008309 1.6e-257 893.3 834 61.5
Potri.014G170300 Populus trichocarpa HOM05D006371 ORTHO05D008309 3.1e-256 889.0 769 65.0
Gohir.A11G148000 Gossypium hirsutum HOM05D006371 ORTHO05D008309 8.9e-256 887.5 815 62.1
Dinv08538 Davidia involucrata HOM05D006371 ORTHO05D008309 2.6e-255 885.9 908 57.7
MD09G1130200 Malus domestica HOM05D006371 ORTHO05D008309 2.6e-255 885.9 781 63.9
FAN14G0004 Fragaria x ananassa HOM05D006371 ORTHO05D008309 3.4e-255 885.6 822 61.8
Gorai.007G165100 Gossypium raimondii HOM05D006371 ORTHO05D008309 3.4e-255 885.6 814 61.8
FvH4_6g40410 Fragaria vesca HOM05D006371 ORTHO05D008309 5.8e-255 884.8 822 61.8
Sabra14G0129800 Salix brachista HOM05D006371 ORTHO05D008309 1.3e-254 883.6 769 64.9
Ciclev10014166m.g Citrus clementina HOM05D006371 ORTHO05D008309 1.7e-254 883.2 823 61.2
Manes.12G064500 Manihot esculenta HOM05D006371 ORTHO05D008309 1.7e-254 883.2 827 60.7
Duzib133G1082 Durio zibethinus HOM05D006371 ORTHO05D008309 2.2e-254 882.9 779 63.7
CAN.G890.8 Capsicum annuum HOM05D006371 ORTHO05D008309 4.9e-254 881.7 720 66.5
FAN05G5438 Fragaria x ananassa HOM05D006371 ORTHO05D008309 4.9e-254 881.7 824 61.4
RcHm_v2.0_Chr2g0155641 Rosa chinensis HOM05D006371 ORTHO05D008309 8.3e-254 880.9 822 61.2
Gohir.D11G154800 Gossypium hirsutum HOM05D006371 ORTHO05D008309 1.9e-253 879.8 814 61.5
GSVIVG01030124001 Vitis vinifera HOM05D006371 ORTHO05D008309 1.9e-253 879.8 948 56.0
FAN02G4613 Fragaria x ananassa HOM05D006371 ORTHO05D008309 1.6e-252 876.7 824 61.0
PSO675G4792 Papaver somniferum HOM05D006371 ORTHO05D008309 2.7e-252 875.9 820 59.6
EL10Ac6g13348 Beta vulgaris HOM05D006371 ORTHO05D008309 6.0e-252 874.8 909 56.3
TWI36G0955 Tripterygium wilfordii HOM05D006371 ORTHO05D008309 6.0e-252 874.8 768 63.4
PSO541G0072 Papaver somniferum HOM05D006371 ORTHO05D008309 5.1e-251 871.7 829 59.3
MELO3C024185.2 Cucumis melo HOM05D006371 ORTHO05D008309 1.1e-250 870.5 783 62.5
FAN09G0519 Fragaria x ananassa HOM05D006371 ORTHO05D008309 1.1e-250 870.5 824 60.9
Sed0018275 Sechium edule HOM05D006371 ORTHO05D008309 2.5e-250 869.4 822 60.1
Ah.02g129050 Amaranthus hybridus HOM05D006371 ORTHO05D008309 4.3e-250 868.6 837 59.6
Prupe.3G194900 Prunus persica HOM05D006371 ORTHO05D008309 4.3e-250 868.6 959 54.5
CANSAT64G2089 Cannabis sativa HOM05D006371 ORTHO05D008309 7.3e-250 867.8 780 63.5
Aqoxy3G02224 Aquilegia oxysepala HOM05D006371 ORTHO05D008309 8.1e-249 864.4 789 62.0
arahy.Tifrunner.gnm1.ann1.BM1T67 Arachis hypogaea HOM05D006371 ORTHO05D008309 1.1e-248 864.0 847 58.0
Glyma.14G190200 Glycine max HOM05D006371 ORTHO05D008309 1.4e-248 863.6 791 61.6
arahy.Tifrunner.gnm1.ann1.YIC3VW Arachis hypogaea HOM05D006371 ORTHO05D008309 3.1e-248 862.4 851 57.0
Glyma.02G223400 Glycine max HOM05D006371 ORTHO05D008309 3.7e-246 855.5 815 60.2
CsaV3_2G010080 Cucumis sativus L. HOM05D006371 ORTHO05D008309 4.9e-246 855.1 784 61.7
COL.COLO4_19652 Corchorus olitorius HOM05D006371 ORTHO05D008309 8.4e-246 854.4 752 63.0
Lalb_Chr04g0252451 Lupinus albus HOM05D006371 ORTHO05D008309 1.1e-245 854.0 780 61.3
Eucgr.A01367 Eucalyptus grandis HOM05D006371 ORTHO05D008309 1.2e-244 850.5 830 58.7
AUR62039632 Chenopodium quinoa HOM05D006371 ORTHO05D008309 1.6e-244 850.1 871 57.3
LjContig00155g0006571 Lotus japonicus HOM05D006371 ORTHO05D008309 2.1e-244 849.7 815 59.5
Oeu049652.2 Olea europaea HOM05D006371 ORTHO05D008309 1.3e-243 847.0 1051 51.1
ECA232G0409 Erigeron canadensis HOM05D006371 ORTHO05D008309 1.7e-243 846.7 759 61.7
PGR031G1410 Punica granatum HOM05D006371 ORTHO05D008309 1.1e-242 844.0 766 62.1
CARHR102110 Cardamine hirsuta HOM05D006371 ORTHO05D008309 3.3e-242 842.4 757 62.1
Sc07g0001260 Simmondsia chinensis HOM05D006371 ORTHO05D008309 7.3e-242 841.3 956 53.6
A07p06760 Brassica napus HOM05D006371 ORTHO05D008309 9.6e-242 840.9 859 58.0
Sp3g23150 Schrenkiella parvula HOM05D006371 ORTHO05D008309 1.6e-241 840.1 778 61.8
BcaB06g26772 Brassica carinata HOM05D006371 ORTHO05D008309 2.8e-241 839.3 774 62.1
C07p10340 Brassica napus HOM05D006371 ORTHO05D008309 2.8e-241 839.3 858 58.0
BraA07t28469Z Brassica rapa HOM05D006371 ORTHO05D008309 6.2e-241 838.2 856 57.9
BolC7t41483H Brassica oleracea HOM05D006371 ORTHO05D008309 1.4e-240 837.0 858 57.9
Thhalv10002385m.g Eutrema salsugineum HOM05D006371 ORTHO05D008309 1.4e-240 837.0 871 56.3
AT2G04270 Arabidopsis thaliana HOM05D006371 ORTHO05D008309 2.4e-240 836.3 723 64.6
BcaC06g35860 Brassica carinata HOM05D006371 ORTHO05D008309 4.0e-240 835.5 858 57.8
Carub.0003s2599 Capsella rubella HOM05D006371 ORTHO05D008309 5.2e-240 835.1 849 58.8
AL3G41970 Arabidopsis lyrata HOM05D006371 ORTHO05D008309 8.9e-240 834.3 958 53.0
Aa31sc575G10 Aethionema arabicum HOM05D006371 ORTHO05D008309 1.9e-237 826.6 783 59.4
THA.LOC104808834 Tarenaya hassleriana HOM05D006371 ORTHO05D008309 2.4e-237 826.2 882 55.3
AUR62040011 Chenopodium quinoa HOM05D006371 ORTHO05D008309 7.1e-237 824.7 844 57.3
HanXRQChr09g0256951 Helianthus annuus HOM05D006371 ORTHO05D008309 5.1e-235 818.5 960 51.9
ATR0751G221 Amborella trichopoda HOM05D006371 ORTHO05D008309 2.5e-234 816.2 860 55.5
Ca_05557_v3 Cicer arietinum L. HOM05D006371 ORTHO05D008309 1.8e-232 810.1 753 59.0
ECA238G3451 Erigeron canadensis HOM05D006371 ORTHO05D008309 3.1e-232 809.3 761 59.8
TPR.G13852 Trifolium pratense HOM05D006371 ORTHO05D008309 3.1e-232 809.3 762 59.1
Lsat_1_v5_gn_4_142580 Lactuca sativa HOM05D006371 ORTHO05D008309 1.4e-229 800.4 870 54.7
Thecc.01G199300 Theobroma cacao HOM05D006371 ORTHO05D008309 1.4e-229 800.4 817 57.5
Psat2g060760 Pisum sativum HOM05D006371 ORTHO05D008309 2.1e-228 796.6 765 58.7
TAR627G0565 Trochodendron aralioides HOM05D006371 ORTHO05D008309 4.6e-228 795.4 686 65.9
HPP92_003032 Vanilla planifolia HOM05D006371 ORTHO05D008309 8.4e-222 774.6 813 55.7
unitig_748.g7080 Utricularia gibba HOM05D006371 ORTHO05D005825 2.3e-219 766.5 713 62.8
Hund03659 Selenicereus undatus HOM05D006371 ORTHO05D008309 2.4e-216 756.5 983 48.4
Medtr5g069430 Medicago truncatula HOM05D006371 ORTHO05D008309 1.7e-214 750.4 798 54.4
Os08g0323600 Oryza sativa ssp. japonica HOM05D006371 ORTHO05D008309 7.9e-212 741.5 881 51.4
Cpa.g.sc136.51 Carica papaya HOM05D006371 ORTHO05D008309 3.0e-211 739.6 621 65.2
Zm00001eb038720 Zea mays HOM05D006371 ORTHO05D008309 3.0e-211 739.6 791 54.5
Hund03661 Selenicereus undatus HOM05D006371 ORTHO05D008309 1.2e-188 664.5 938 46.5
Hma1.2p1_0315F.1_g122770 Hydrangea macrophylla HOM05D006371 ORTHO05D008309 4.5e-183 646.0 736 53.5
Nitab4.5_0023804g0010 Nicotiana tabacum HOM05D006371 ORTHO05D008309 1.3e-177 627.9 770 51.0
MBI15_g38530_MAGBIO Magnolia biondii HOM05D006371 ORTHO05D008309 7.2e-173 612.1 619 58.3
DCAR_023137 Daucus carota HOM05D006371 ORTHO05D008309 8.8e-171 605.1 728 50.3
vmacro20507 Vaccinium macrocarpon HOM05D006371 ORTHO05D008309 1.4e-168 597.8 1020 42.0
ClCG02G003000 Citrullus lanatus HOM05D006371 ORTHO05D008309 4.1e-168 596.3 608 57.6
Phvul.008G190000 Phaseolus vulgaris HOM05D006371 ORTHO05D008309 2.4e-160 570.5 580 57.8
Mapoly0111s0056 Marchantia polymorpha HOM05D006371 ORTHO05D008309 1.7e-158 564.3 721 46.2
Rhsim10G0203500 Rhododendron simsii HOM05D006371 ORTHO05D008309 3.6e-148 530.0 991 39.7
CDE02G2282 Ceratophyllum demersum HOM05D006371 ORTHO05D008309 9.2e-144 515.4 586 53.6
Pp3c4_14910 Physcomitrium patens HOM05D006371 ORTHO05D008309 1.9e-141 507.7 704 42.2
Atru.chr6.3429 Acer truncatum HOM05D006371 ORTHO05D008309 4.7e-132 476.5 703 44.5
AagrBONN_evm.TU.Sc2ySwM_368.983 Anthoceros agrestis HOM05D006371 ORTHO05D008309 2.4e-128 464.2 695 42.7
SMO117G0275 Selaginella moellendorffii HOM05D006371 ORTHO05D008309 1.3e-126 458.4 575 47.0
Haze_12588 Corylus avellana HOM05D006371 ORTHO05D008309 8.4e-113 412.5 551 48.8
Haze_12589 Corylus avellana HOM05D006371 ORTHO05D008309 3.2e-96 357.5 426 51.9
SEGI_21719 Sequoiadendron giganteum HOM05D006371 ORTHO05D008309 5.5e-64 250.4 234 57.7
AUR62026198 Chenopodium quinoa HOM05D006371 ORTHO05D008309 7.7e-58 229.9 229 55.9
Ca_28887_v3 Cicer arietinum L. HOM05D006371 ORTHO05D008309 2.2e-44 185.3 372 31.7
MD17G1105600 Malus domestica HOM05D006371 ORTHO05D008309 4.1e-43 181.0 216 53.7
MCO12G287 Micromonas commoda HOM05D006371 ORTHO05D008309 4.1e-35 154.5 336 30.7
SEGI_30134 Sequoiadendron giganteum HOM05D006371 ORTHO05D008309 1.3e-20 106.3 270 33.0
SEGI_19700 Sequoiadendron giganteum HOM05D006371 ORTHO05D008309 8.3e-20 103.6 74 70.3
MD17G1105400 Malus domestica HOM05D006371 ORTHO05D008309 5.4e-19 100.9 88 62.5
CBR_g28919 Chara braunii HOM05D006371 ORTHO05D000048 1.6e-18 99.4 143 42.0
CBR_g28910 Chara braunii HOM05D000019 ORTHO05D000048 2.5e-16 92.0 130 43.8
AUR62026199 Chenopodium quinoa HOM05D000691 ORTHO05D000378 2.9e-12 78.6 62 67.7
CBR_g28922 Chara braunii HOM05D000019 ORTHO05D000048 5.4e-11 74.3 365 26.3
MD17G1105500 Malus domestica HOM05D006371 ORTHO05D008309 3.9e-09 68.2 41 85.4
AUR62026201 Chenopodium quinoa HOM05D006371 ORTHO05D008309 5.6e-08 64.3 38 86.8
Hma1.2p1_0053F.1_g030840 Hydrangea macrophylla HOM05D001486 ORTHO05D017058 5.2e-06 57.8 39 71.8


User provided reference genes

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