Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow7G2680 Salvia bowleyana HOM05D002024 ORTHO05D007288 0.0e+00 1081.6 537 100.0
Migut.M00437 Erythranthe guttata HOM05D002024 ORTHO05D007288 2.1e-188 662.9 525 65.1
Oeu019888.4 Olea europaea HOM05D002024 ORTHO05D007288 1.9e-186 656.4 524 63.4
Actinidia27264 Actinidia chinensis HOM05D002024 ORTHO05D007288 3.6e-177 625.5 528 60.8
CSS0021724 Camellia sinensis var. sinensis HOM05D002024 ORTHO05D007288 1.9e-173 613.2 524 60.5
Dinv05430 Davidia involucrata HOM05D002024 ORTHO05D007288 4.6e-172 608.6 529 60.9
vmacro12202 Vaccinium macrocarpon HOM05D002024 ORTHO05D007288 8.7e-171 604.4 530 60.0
Rhsim06G0162700 Rhododendron simsii HOM05D002024 ORTHO05D007288 3.3e-170 602.4 526 59.5
Cc05_g04580 Coffea canephora HOM05D002024 ORTHO05D007288 8.1e-169 597.8 524 60.5
Cpa.g.sc87.78 Carica papaya HOM05D002024 ORTHO05D007288 2.4e-168 596.3 515 59.2
TAR627G0588 Trochodendron aralioides HOM05D002024 ORTHO05D007288 2.6e-167 592.8 514 59.5
QL08p033036 Quercus lobata HOM05D002024 ORTHO05D007288 1.0e-166 590.9 527 59.2
GSVIVG01030425001 Vitis vinifera HOM05D002024 ORTHO05D007288 2.9e-166 589.3 525 57.5
Potri.002G229000 Populus trichocarpa HOM05D002024 ORTHO05D007288 3.8e-166 589.0 531 58.6
TWI36G0154 Tripterygium wilfordii HOM05D002024 ORTHO05D007288 3.8e-166 589.0 528 57.4
Gohir.D04G189200 Gossypium hirsutum HOM05D002024 ORTHO05D007288 1.2e-164 583.9 541 56.4
Gorai.012G184500 Gossypium raimondii HOM05D002024 ORTHO05D007288 1.2e-164 583.9 541 56.4
Nitab4.5_0002137g0070 Nicotiana tabacum HOM05D002024 ORTHO05D007288 2.7e-164 582.8 549 57.7
VMungo1127G2134 Vigna mungo HOM05D002024 ORTHO05D007288 3.5e-164 582.4 541 57.3
Duzib248G0941 Durio zibethinus HOM05D002024 ORTHO05D007288 6.0e-164 581.6 540 55.6
Sc06g0009580 Simmondsia chinensis HOM05D002024 ORTHO05D007288 2.3e-163 579.7 530 57.7
RcHm_v2.0_Chr2g0159251 Rosa chinensis HOM05D002024 ORTHO05D007288 5.1e-163 578.6 531 57.3
Ciclev10014176m.g Citrus clementina HOM05D002024 ORTHO05D007288 5.7e-162 575.1 533 59.1
FAN05G4210 Fragaria x ananassa HOM05D002024 ORTHO05D007288 5.7e-162 575.1 532 58.3
FvH4_6g43150 Fragaria vesca HOM05D002024 ORTHO05D007288 1.3e-161 573.9 532 58.1
MD09G1109200 Malus domestica HOM05D002024 ORTHO05D007288 1.6e-161 573.5 536 58.2
MBI18_g03588_MAGBIO Magnolia biondii HOM05D002024 ORTHO05D007288 3.7e-161 572.4 533 57.6
Nn1g03510 Nelumbo nucifera HOM05D002024 ORTHO05D007288 4.8e-161 572.0 530 57.0
Thecc.02G316100 Theobroma cacao HOM05D002024 ORTHO05D007288 4.8e-161 572.0 534 56.0
Manes.12G066500 Manihot esculenta HOM05D002024 ORTHO05D007288 8.2e-161 571.2 528 56.4
CiPaw.04G116100 Carya illinoinensis HOM05D002024 ORTHO05D007288 4.1e-160 568.9 535 58.1
HanXRQChr16g0504911 Helianthus annuus HOM05D002024 ORTHO05D007288 1.2e-159 567.4 524 56.3
Sopen07g025960 Solanum pennellii HOM05D002024 ORTHO05D007288 2.0e-159 566.6 530 56.8
CAN.G1740.3 Capsicum annuum HOM05D002024 ORTHO05D007288 7.6e-159 564.7 533 56.3
Phvul.011G103500 Phaseolus vulgaris HOM05D002024 ORTHO05D007288 7.6e-159 564.7 531 56.1
PGR042G3011 Punica granatum HOM05D002024 ORTHO05D007288 1.7e-158 563.5 534 55.6
Eucgr.A01124 Eucalyptus grandis HOM05D002024 ORTHO05D007288 2.9e-158 562.8 526 54.8
Glyma.06G305900 Glycine max HOM05D002024 ORTHO05D007288 2.9e-158 562.8 529 56.5
Thhalv10016228m.g Eutrema salsugineum HOM05D002024 ORTHO05D007288 6.5e-158 561.6 531 55.4
Carub.0004s1377 Capsella rubella HOM05D002024 ORTHO05D007288 8.4e-158 561.2 513 56.5
AL4G27810 Arabidopsis lyrata HOM05D002024 ORTHO05D007288 1.1e-157 560.8 514 56.2
arahy.Tifrunner.gnm1.ann1.FW4LSX Arachis hypogaea HOM05D002024 ORTHO05D007288 1.4e-157 560.5 530 55.3
FAN14G2536 Fragaria x ananassa HOM05D002024 ORTHO05D007288 2.5e-157 559.7 551 55.4
PSO675G1279 Papaver somniferum HOM05D002024 ORTHO05D007288 2.5e-157 559.7 523 54.9
Hund06720 Selenicereus undatus HOM05D002024 ORTHO05D007288 3.2e-157 559.3 536 54.3
THA.LOC104826151 Tarenaya hassleriana HOM05D002024 ORTHO05D007288 3.2e-157 559.3 524 56.3
arahy.Tifrunner.gnm1.ann1.3TL5KL Arachis hypogaea HOM05D002024 ORTHO05D007288 4.2e-157 558.9 526 54.9
CANSAT64G1657 Cannabis sativa HOM05D002024 ORTHO05D007288 4.2e-157 558.9 531 55.9
AT2G32415 Arabidopsis thaliana HOM05D002024 ORTHO05D007288 5.5e-157 558.5 514 55.8
Sabra02G0175000 Salix brachista HOM05D002024 ORTHO05D007288 2.1e-156 556.6 531 57.6
Aqoxy1G02138 Aquilegia oxysepala HOM05D002024 ORTHO05D007288 2.7e-156 556.2 525 55.4
PSO541G4901 Papaver somniferum HOM05D002024 ORTHO05D007288 6.1e-156 555.1 525 53.9
CsaV3_7G003570 Cucumis sativus L. HOM05D002024 ORTHO05D007288 1.3e-155 553.9 527 56.4
Medtr4g048230 Medicago truncatula HOM05D002024 ORTHO05D007288 1.3e-155 553.9 541 55.3
Aa31LG5G4860 Aethionema arabicum HOM05D002024 ORTHO05D007288 2.3e-155 553.1 528 54.9
Sp4g14790 Schrenkiella parvula HOM05D002024 ORTHO05D007288 2.3e-155 553.1 530 54.5
Lsat_1_v5_gn_7_92221 Lactuca sativa HOM05D002024 ORTHO05D007288 3.0e-155 552.7 527 55.2
BraA05t20260Z Brassica rapa HOM05D002024 ORTHO05D007288 5.1e-155 552.0 531 54.8
CARHR126240 Cardamine hirsuta HOM05D002024 ORTHO05D007288 8.7e-155 551.2 525 53.9
Ca_30385_v3 Cicer arietinum L. HOM05D002024 ORTHO05D007288 8.7e-155 551.2 529 55.6
Lj3g0021786 Lotus japonicus HOM05D002024 ORTHO05D007288 8.7e-155 551.2 516 57.4
EL10Ac9g20670 Beta vulgaris HOM05D002024 ORTHO05D007288 5.7e-154 548.5 536 55.0
ClCG02G001940 Citrullus lanatus HOM05D002024 ORTHO05D007288 1.3e-153 547.4 535 56.4
Solyc07g052340.4 Solanum lycopersicum HOM05D002024 ORTHO05D007288 1.3e-153 547.4 511 56.6
C04p17230 Brassica napus HOM05D002024 ORTHO05D007288 1.6e-153 547.0 530 55.3
Haze_12862 Corylus avellana HOM05D002024 ORTHO05D007288 2.2e-153 546.6 525 57.1
Sed0008958 Sechium edule HOM05D002024 ORTHO05D007288 2.8e-153 546.2 528 54.7
BcaB06g28594 Brassica carinata HOM05D002024 ORTHO05D007288 1.4e-152 543.9 523 54.9
AUR62025026 Chenopodium quinoa HOM05D002024 ORTHO05D007288 4.1e-152 542.3 528 54.9
Sed0017029 Sechium edule HOM05D002024 ORTHO05D007288 4.1e-152 542.3 530 55.3
BolC4t23275H Brassica oleracea HOM05D002024 ORTHO05D007288 5.3e-152 542.0 527 55.2
FAN02G4513 Fragaria x ananassa HOM05D002024 ORTHO05D007288 5.3e-152 542.0 532 56.0
TPR.G4605 Trifolium pratense HOM05D002024 ORTHO05D007288 2.0e-151 540.0 531 54.4
BcaC02g07923 Brassica carinata HOM05D002024 ORTHO05D007288 3.4e-151 539.3 524 55.3
C04p61920 Brassica napus HOM05D002024 ORTHO05D007288 3.4e-151 539.3 524 55.3
MELO3C018818.2 Cucumis melo HOM05D002024 ORTHO05D007288 5.9e-151 538.5 541 54.5
Psat7g157200 Pisum sativum HOM05D002024 ORTHO05D007288 1.3e-150 537.3 529 54.3
A05p13190 Brassica napus HOM05D002024 ORTHO05D007288 2.9e-150 536.2 531 53.7
Ca_12394_v3 Cicer arietinum L. HOM05D002024 ORTHO05D007288 6.5e-150 535.0 525 55.0
BraA04t18006Z Brassica rapa HOM05D002024 ORTHO05D007288 3.2e-149 532.7 509 55.8
A04p24930 Brassica napus HOM05D002024 ORTHO05D007288 4.2e-149 532.3 509 56.0
BolC4t27671H Brassica oleracea HOM05D002024 ORTHO05D007288 1.2e-148 530.8 518 55.2
Prupe.3G217000 Prunus persica HOM05D002024 ORTHO05D007288 2.7e-148 529.6 535 56.4
ATR0794G134 Amborella trichopoda HOM05D002024 ORTHO05D007288 5.3e-144 515.4 558 51.4
CDE05G2902 Ceratophyllum demersum HOM05D002024 ORTHO05D007288 4.5e-143 512.3 545 51.9
Dinv39713 Davidia involucrata HOM05D002024 ORTHO05D007288 5.0e-142 508.8 485 56.3
Actinidia09716 Actinidia chinensis HOM05D002024 ORTHO05D007288 2.7e-140 503.1 528 52.5
Peaxi162Scf00007g00832 Petunia axillaris HOM05D002024 ORTHO05D007288 1.0e-139 501.1 527 52.6
FAN09G4217 Fragaria x ananassa HOM05D002024 ORTHO05D007288 3.0e-139 499.6 507 55.8
Zm00001eb322610 Zea mays HOM05D002024 ORTHO05D007288 1.1e-138 497.7 548 49.3
ECA236G2373 Erigeron canadensis HOM05D002024 ORTHO05D007288 1.7e-137 493.8 523 52.2
Lj8A125T72 Lonicera japonica HOM05D002024 ORTHO05D007288 1.3e-134 484.2 535 51.8
Gohir.A04G144700 Gossypium hirsutum HOM05D002024 ORTHO05D007288 3.6e-132 476.1 426 58.5
Os07g0513100 Oryza sativa ssp. japonica HOM05D002024 ORTHO05D007288 3.6e-132 476.1 539 48.4
Nitab4.5_0004417g0080 Nicotiana tabacum HOM05D002024 ORTHO05D007288 1.8e-131 473.8 535 51.6
BcaC02g11322 Brassica carinata HOM05D002024 ORTHO05D007288 2.4e-128 463.4 429 56.9
Hma1.2p1_0249F.1_g102286 Hydrangea macrophylla HOM05D002024 ORTHO05D007288 9.1e-120 434.9 303 69.3
COL.COLO4_27729 Corchorus olitorius HOM05D002024 ORTHO05D007288 4.2e-117 426.0 405 57.0
Lalb_Chr19g0135891 Lupinus albus HOM05D002024 ORTHO05D007288 1.5e-114 417.5 400 56.0
unitig_899.g15271 Utricularia gibba HOM05D002024 ORTHO05D007288 2.0e-111 407.1 393 55.0
Pp3c18_1700 Physcomitrium patens HOM05D002024 ORTHO05D007288 7.7e-111 405.2 429 50.3
Mapoly0006s0210 Marchantia polymorpha HOM05D002024 ORTHO05D007288 5.7e-106 389.0 540 42.2
CBR_g39322 Chara braunii HOM05D002024 ORTHO05D007288 8.0e-100 368.6 468 45.1
ECA238G0106 Erigeron canadensis HOM05D000014 ORTHO05D007288 2.4e-96 357.1 525 41.1
SEGI_37667 Sequoiadendron giganteum HOM05D002024 ORTHO05D007288 8.1e-92 342.0 291 60.1
DCAR_019765 Daucus carota HOM05D002024 ORTHO05D007288 2.6e-90 337.0 579 39.2
HPP92_014132 Vanilla planifolia HOM05D002024 ORTHO05D007288 2.4e-75 287.3 202 69.3
Glyma.12G098667 Glycine max HOM05D002024 ORTHO05D007288 2.3e-54 217.6 179 58.7
Atru.chr6.3187 Acer truncatum HOM05D002024 ORTHO05D007288 6.7e-54 216.1 274 49.3
SGA_v2.0_scaffold70G23397 Striga asiatica HOM05D002024 ORTHO05D007288 1.8e-46 191.4 137 67.9
Cre03.g145767 Chlamydomonas reinhardtii HOM05D002024 ORTHO05D007288 4.8e-44 183.3 147 55.8
Glyma.12G098733 Glycine max HOM05D002024 ORTHO05D007288 1.4e-30 138.7 223 41.7
Cre10.g451300 Chlamydomonas reinhardtii HOM05D002024 ORTHO05D007288 2.3e-30 137.9 215 34.9
CDE10G1161 Ceratophyllum demersum HOM05D002024 ORTHO05D007288 4.4e-21 107.1 224 36.2
A10p12870 Brassica napus HOM05D002024 ORTHO05D007288 7.4e-21 106.3 219 32.9
BcaC04g19913 Brassica carinata HOM05D002024 ORTHO05D007288 5.2e-14 83.6 173 34.1
AagrBONN_evm.TU.Sc2ySwM_117.2157 Anthoceros agrestis HOM05D002024 ORTHO05D007288 2.8e-12 77.8 148 34.5
C09p49940 Brassica napus HOM05D002024 ORTHO05D007288 3.6e-07 60.8 51 45.1


User provided reference genes

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