Gene: AL4G27810

General Information

Structural Information

  • Species Arabidopsis lyrata
  • Gene Identifier AL4G27810
  • Transcript Identifier AL4G27810.t1
  • Gene Type Coding gene
  • Location scaffold_4 : 15328541-15332558 : negative

Gene Family Information

  • ID HOM05D002024
  • #Genes/#Species 327/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id AL4G27810.v2.1
  • synonym fgenesh1_pm.C_scaffold_4001039
  • pacid 35922284

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0044237
IEA
InterProcellular metabolic process
GO:0006139
IEA
InterPronucleobase-containing compound metabolic process
GO:0000467
IEA
InterProexonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
InterPronucleic acid binding
GO:0000166
IEA
InterPronucleotide binding
GO:0008408
IEA
InterPro3'-5' exonuclease activity
GO:0000175
IEA
InterPro3'-5'-exoribonuclease activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT2G32415

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR002121 HRDC domain
IPR044876 HRDC domain superfamily
IPR036397 Ribonuclease H superfamily
IPR010997 HRDC-like superfamily
IPR002562 3'-5' exonuclease domain
IPR012337 Ribonuclease H-like superfamily
IPR045092 Exosome complex exonuclease Rrp6-like
Mapman id Description
16.4.1.2.1 RNA processing.RNA surveillance.exosome complex.associated co-factor activities.exoribonuclease (RRP6L)