Gene: Atru.chr6.3187
General Information
Structural Information
- Species Acer truncatum
- Gene Identifier Atru.chr6.3187
- Transcript Identifier Atru.chr6.3187
- Gene Type Coding gene
- Location chr6 : 42450365-42452454 : negative
Gene Family Information
- ID HOM05D002024
- #Genes/#Species 327/97
- Phylogenetic origin
- ID ORTHO05D007288
- #Genes/#Species 132/93
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0000467 | IEA | InterPro | exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | |
| GO:0044237 | ISO | PLAZA Homology (enrichment) | cellular metabolic process | HOM05D002024 |
| GO:0006139 | ISO | PLAZA Homology (enrichment) | nucleobase-containing compound metabolic process | HOM05D002024 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0000175 | IEA | InterPro | 3'-5'-exoribonuclease activity | |
| GO:0000166 | ISO | PLAZA Homology (enrichment) | nucleotide binding | HOM05D002024 |
| GO:0003676 | ISO | PLAZA Homology (enrichment) | nucleic acid binding | HOM05D002024 |
| GO:0008408 | ISO | PLAZA Homology (enrichment) | 3'-5' exonuclease activity | HOM05D002024 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR045092 | Exosome complex exonuclease Rrp6-like |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |