Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow4G1104 Salvia bowleyana HOM05D005175 ORTHO05D006302 3.9e-105 384.8 195 100.0
Migut.A00211 Erythranthe guttata HOM05D005175 ORTHO05D006302 4.1e-62 241.9 244 55.3
MSTRG.11700 Avicennia marina HOM05D005175 ORTHO05D006302 1.9e-54 216.5 244 50.8
Hma1.2p1_0049F.1_g028680 Hydrangea macrophylla HOM05D005175 ORTHO05D006302 1.1e-46 190.7 244 43.9
Eucgr.C02924 Eucalyptus grandis HOM05D005175 ORTHO05D006302 9.2e-46 187.6 244 42.6
Rhsim02G0179100 Rhododendron simsii HOM05D005175 ORTHO05D006302 9.2e-46 187.6 244 43.4
Atru.chr7.2095 Acer truncatum HOM05D005175 ORTHO05D006302 1.2e-45 187.2 244 43.9
Atru.chr7.2109 Acer truncatum HOM05D005175 ORTHO05D006302 1.6e-45 186.8 244 43.9
Dinv14260 Davidia involucrata HOM05D005175 ORTHO05D006302 3.5e-45 185.7 244 43.4
GSVIVG01035631001 Vitis vinifera HOM05D005175 ORTHO05D006302 6.6e-44 181.4 244 43.4
PGR044G2490 Punica granatum HOM05D005175 ORTHO05D006302 8.6e-44 181.0 247 42.1
SGA_v2.0_scaffold75G25007 Striga asiatica HOM05D005175 ORTHO05D006302 1.1e-43 180.6 187 52.9
CiPaw.11G052500 Carya illinoinensis HOM05D005175 ORTHO05D006302 3.3e-43 179.1 244 42.6
Gohir.D13G193000 Gossypium hirsutum HOM05D005175 ORTHO05D006302 9.5e-43 177.6 244 43.4
Ciclev10009310m.g Citrus clementina HOM05D005175 ORTHO05D006302 1.2e-42 177.2 244 43.0
Solyc08g066700.3 Solanum lycopersicum HOM05D005175 ORTHO05D006302 1.6e-42 176.8 232 43.5
CAN.G1674.2 Capsicum annuum HOM05D005175 ORTHO05D006302 2.1e-42 176.4 244 43.0
PGSC0003DMG400004310 Solanum tuberosum HOM05D005175 ORTHO05D006302 2.1e-42 176.4 234 43.6
Nn7g37002 Nelumbo nucifera HOM05D005175 ORTHO05D006302 2.8e-42 176.0 244 41.0
Cfa013314 Carpinus fangiana HOM05D005175 ORTHO05D006302 3.6e-42 175.6 244 41.8
QL12p029089 Quercus lobata HOM05D005175 ORTHO05D006302 8.1e-42 174.5 247 41.3
CSS0003070 Camellia sinensis var. sinensis HOM05D005175 ORTHO05D006302 3.1e-41 172.6 234 43.2
Gorai.013G218900 Gossypium raimondii HOM05D005175 ORTHO05D006302 3.1e-41 172.6 245 43.3
Peaxi162Scf00227g00213 Petunia axillaris HOM05D005175 ORTHO05D006302 3.1e-41 172.6 241 44.4
Hund19520 Selenicereus undatus HOM05D005175 ORTHO05D006302 3.1e-41 172.6 193 48.2
CSS0010535 Camellia sinensis var. sinensis HOM05D005175 ORTHO05D006302 4.0e-41 172.2 234 42.3
AUR62009295 Chenopodium quinoa HOM05D005175 ORTHO05D006302 4.0e-41 172.2 202 47.5
Gohir.A13G186200 Gossypium hirsutum HOM05D005175 ORTHO05D006302 4.0e-41 172.2 244 42.6
HanXRQChr01g0029811 Helianthus annuus HOM05D005175 ORTHO05D006302 5.2e-41 171.8 244 41.0
ClCG08G012270 Citrullus lanatus HOM05D005175 ORTHO05D006302 1.2e-40 170.6 244 43.4
Potri.018G043600 Populus trichocarpa HOM05D005175 ORTHO05D006302 1.5e-40 170.2 244 41.4
Manes.01G107300 Manihot esculenta HOM05D005175 ORTHO05D006302 2.0e-40 169.9 242 41.7
DCAR_004475 Daucus carota HOM05D005175 ORTHO05D006302 2.6e-40 169.5 243 41.6
Sp5g15420 Schrenkiella parvula HOM05D005175 ORTHO05D006302 2.6e-40 169.5 244 42.6
BraA06t25187Z Brassica rapa HOM05D005175 ORTHO05D006302 5.8e-40 168.3 268 40.3
ECA248G2598 Erigeron canadensis HOM05D005175 ORTHO05D006302 9.9e-40 167.5 243 40.3
Sabra18G0043700 Salix brachista HOM05D005175 ORTHO05D006302 9.9e-40 167.5 242 40.9
AL5G25000 Arabidopsis lyrata HOM05D005175 ORTHO05D006302 1.3e-39 167.2 244 41.0
Lsat_1_v5_gn_1_47181 Lactuca sativa HOM05D005175 ORTHO05D006302 1.7e-39 166.8 244 38.9
Nitab4.5_0007810g0010 Nicotiana tabacum HOM05D005175 ORTHO05D006302 1.7e-39 166.8 237 43.9
Thecc.09G044300 Theobroma cacao HOM05D005175 ORTHO05D006302 1.7e-39 166.8 244 41.0
Nitab4.5_0007838g0040 Nicotiana tabacum HOM05D005175 ORTHO05D006302 2.2e-39 166.4 237 43.9
RcHm_v2.0_Chr6g0306141 Rosa chinensis HOM05D005175 ORTHO05D006302 2.2e-39 166.4 232 42.7
THA.LOC104814772 Tarenaya hassleriana HOM05D005175 ORTHO05D006302 2.2e-39 166.4 241 40.7
FvH4_2g35660 Fragaria vesca HOM05D005175 ORTHO05D006302 2.9e-39 166.0 232 42.2
TAR626G1708 Trochodendron aralioides HOM05D005175 ORTHO05D006302 2.9e-39 166.0 242 40.5
TAR636G0460 Trochodendron aralioides HOM05D005175 ORTHO05D006302 2.9e-39 166.0 242 40.5
AT3G46210 Arabidopsis thaliana HOM05D005175 ORTHO05D006302 3.8e-39 165.6 244 41.0
CsaV3_2G030910 Cucumis sativus L. HOM05D005175 ORTHO05D006302 3.8e-39 165.6 244 41.8
Sed0006550 Sechium edule HOM05D005175 ORTHO05D006302 3.8e-39 165.6 244 42.2
TWI32G0813 Tripterygium wilfordii HOM05D005175 ORTHO05D006302 4.9e-39 165.2 238 39.9
Carub.0005s1205 Capsella rubella HOM05D005175 ORTHO05D006302 6.4e-39 164.9 244 40.6
BcaC01g01925 Brassica carinata HOM05D005175 ORTHO05D006302 8.4e-39 164.5 244 42.2
A06p20990 Brassica napus HOM05D005175 ORTHO05D006302 1.1e-38 164.1 252 40.9
Ca_07899_v3 Cicer arietinum L. HOM05D005175 ORTHO05D006302 1.4e-38 163.7 244 41.4
TPR.G26940 Trifolium pratense HOM05D005175 ORTHO05D006302 1.4e-38 163.7 244 40.2
MELO3C011145.2 Cucumis melo HOM05D005175 ORTHO05D006302 1.9e-38 163.3 244 41.0
Glyma.18G230900 Glycine max HOM05D005175 ORTHO05D006302 1.9e-38 163.3 244 40.6
CARHR154650 Cardamine hirsuta HOM05D005175 ORTHO05D006302 5.4e-38 161.8 244 39.3
Dinv27896 Davidia involucrata HOM05D005175 ORTHO05D006302 5.4e-38 161.8 130 63.1
Prupe.1G449000 Prunus persica HOM05D005175 ORTHO05D006302 5.4e-38 161.8 244 43.0
AUR62043392 Chenopodium quinoa HOM05D005175 ORTHO05D006302 9.2e-38 161.0 222 44.1
BolC3t19335H Brassica oleracea HOM05D005175 ORTHO05D006302 1.6e-37 160.2 252 40.9
Medtr7g076910 Medicago truncatula HOM05D005175 ORTHO05D006302 2.1e-37 159.8 244 38.9
MD01G1039900 Malus domestica HOM05D005175 ORTHO05D006302 2.7e-37 159.5 232 42.2
Glyma.09G261100 Glycine max HOM05D005175 ORTHO05D006302 3.5e-37 159.1 244 39.3
CANSAT11G2394 Cannabis sativa HOM05D005175 ORTHO05D006302 4.6e-37 158.7 234 41.5
AUR62041709 Chenopodium quinoa HOM05D005175 ORTHO05D006302 7.8e-37 157.9 218 45.4
Duzib150G1530 Durio zibethinus HOM05D005175 ORTHO05D006302 7.8e-37 157.9 245 40.4
Thhalv10002814m.g Eutrema salsugineum HOM05D005175 ORTHO05D006302 7.8e-37 157.9 244 39.8
Lj8C586G3 Lonicera japonica HOM05D005175 ORTHO05D006302 1.3e-36 157.1 123 61.8
Lalb_Chr08g0233831 Lupinus albus HOM05D005175 ORTHO05D006302 1.3e-36 157.1 242 40.5
Psat3g124840 Pisum sativum HOM05D005175 ORTHO05D006302 1.7e-36 156.8 247 38.5
EL10Ac2g04031 Beta vulgaris HOM05D005175 ORTHO05D006302 3.0e-36 156.0 234 39.7
Psat3g109920 Pisum sativum HOM05D005175 ORTHO05D006302 3.0e-36 156.0 247 38.9
Lj8C577G3 Lonicera japonica HOM05D005175 ORTHO05D006302 6.6e-36 154.8 123 61.0
MD15G1311800 Malus domestica HOM05D005175 ORTHO05D006302 1.1e-35 154.1 232 41.8
Cc08_g09460 Coffea canephora HOM05D005175 ORTHO05D006302 1.9e-35 153.3 232 38.4
Lj2g0027256 Lotus japonicus HOM05D005175 ORTHO05D006302 1.9e-35 153.3 244 38.9
Phvul.008G066200 Phaseolus vulgaris HOM05D005175 ORTHO05D006302 4.3e-35 152.1 239 38.5
Haze_21802 Corylus avellana HOM05D005175 ORTHO05D006302 1.2e-34 150.6 130 59.2
Ah.15g099330 Amaranthus hybridus HOM05D005175 ORTHO05D006302 2.1e-34 149.8 238 38.2
COL.COLO4_20965 Corchorus olitorius HOM05D005175 ORTHO05D006302 4.7e-34 148.7 151 54.3
PSO566G0264 Papaver somniferum HOM05D005175 ORTHO05D006302 6.2e-34 148.3 239 37.2
C03p70530 Brassica napus HOM05D005175 ORTHO05D006302 8.1e-34 147.9 130 60.0
PSO782G3154 Papaver somniferum HOM05D005175 ORTHO05D006302 1.8e-33 146.7 239 37.7
FAN20G1449 Fragaria x ananassa HOM05D005175 ORTHO05D006302 2.4e-33 146.4 270 36.7
arahy.Tifrunner.gnm1.ann1.WUZH4U Arachis hypogaea HOM05D005175 ORTHO05D006302 6.9e-33 144.8 130 56.9
Potri.006G239100 Populus trichocarpa HOM05D005175 ORTHO05D006302 6.9e-33 144.8 155 50.3
MBI04_g27064_MAGBIO Magnolia biondii HOM05D005175 ORTHO05D006302 1.2e-32 144.1 237 39.7
ATR0705G208 Amborella trichopoda HOM05D005175 ORTHO05D006302 2.0e-32 143.3 131 58.8
TAR383G0707 Trochodendron aralioides HOM05D005175 ORTHO05D006302 2.0e-32 143.3 128 53.1
CDE02G3559 Ceratophyllum demersum HOM05D005175 ORTHO05D006302 3.8e-31 139.0 240 37.9
Aqoxy7G01494 Aquilegia oxysepala HOM05D005175 ORTHO05D006302 4.9e-31 138.7 236 36.4
Actinidia30274 Actinidia chinensis HOM05D005175 ORTHO05D006302 6.4e-31 138.3 155 49.7
Aqoxy4G02391 Aquilegia oxysepala HOM05D005175 ORTHO05D006302 8.4e-31 137.9 121 54.5
Sc09g0009230 Simmondsia chinensis HOM05D005175 ORTHO05D006302 1.9e-30 136.7 205 40.0
Duzib168G0626 Durio zibethinus HOM05D005175 ORTHO05D006302 2.7e-29 132.9 244 37.3
vmacro11061 Vaccinium macrocarpon HOM05D005175 ORTHO05D006302 1.0e-28 131.0 237 36.7
Os03g0854200 Oryza sativa ssp. japonica HOM05D005175 ORTHO05D006302 3.3e-27 125.9 238 34.5
HPP92_018407 Vanilla planifolia HOM05D005175 ORTHO05D006302 2.4e-25 119.8 239 35.1
Mapoly0050s0095 Marchantia polymorpha HOM05D005175 ORTHO05D006302 5.3e-25 118.6 238 34.9
Pp3c4_10290 Physcomitrium patens HOM05D005175 ORTHO05D006302 6.9e-25 118.2 236 34.7
SEGI_05611 Sequoiadendron giganteum HOM05D005175 ORTHO05D006302 6.9e-25 118.2 236 33.1
Psat0s4355g0080 Pisum sativum HOM05D005175 ORTHO05D006302 2.0e-24 116.7 203 36.5
Zm00001eb210560 Zea mays HOM05D005175 ORTHO05D006302 4.9e-23 112.1 232 31.5
Aa31LG4G15310 Aethionema arabicum HOM05D005175 ORTHO05D006302 1.0e-20 104.4 111 52.3
Hma1.2p1_0049F.1_g028670 Hydrangea macrophylla HOM05D005175 ORTHO05D006302 3.3e-19 99.4 161 36.6
Gorai.010G107600 Gossypium raimondii HOM05D005175 ORTHO05D006302 5.6e-19 98.6 241 30.3
AagrBONN_evm.TU.Sc2ySwM_228.4701 Anthoceros agrestis HOM05D005175 ORTHO05D006302 7.4e-19 98.2 227 31.3
Glyma.17G169500 Glycine max HOM05D005175 ORTHO05D006302 6.2e-18 95.1 67 68.7
Thhalv10002689m.g Eutrema salsugineum HOM05D005175 ORTHO05D006302 3.1e-17 92.8 164 34.1
Psat0s4355g0120 Pisum sativum HOM05D005175 ORTHO05D006302 1.5e-16 90.5 91 51.6
SalBow4G2242 Salvia bowleyana HOM05D000552 ORTHO05D006302 7.6e-16 88.2 47 93.6
SalBow3G2467 Salvia bowleyana HOM05D000552 ORTHO05D006302 2.2e-15 86.7 47 91.5
CBR_g16978 Chara braunii HOM05D005175 ORTHO05D006302 3.0e-12 76.3 120 35.0
AagrBONN_evm.TU.Sc2ySwM_369.362 Anthoceros agrestis HOM05D005175 ORTHO05D006302 1.9e-11 73.6 201 29.9
Gohir.A06G093501 Gossypium hirsutum HOM05D005175 ORTHO05D006302 4.3e-11 72.4 69 52.2
Gohir.D06G093150 Gossypium hirsutum HOM05D005175 ORTHO05D006302 7.4e-11 71.6 57 56.1
Hma1.2p1_0049F.1_g028690 Hydrangea macrophylla HOM05D005175 ORTHO05D006302 2.8e-10 69.7 53 62.3
Hma1.2p1_0774F.1_g216360 Hydrangea macrophylla HOM05D005175 ORTHO05D006302 1.8e-09 67.0 53 60.4
Lj1g0020257 Lotus japonicus HOM05D005175 ORTHO05D006302 1.7e-07 60.5 140 33.6
Cre14.g624500 Chlamydomonas reinhardtii HOM05D005175 ORTHO05D006302 2.9e-07 59.7 77 41.6


User provided reference genes

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