Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow2G2795 Salvia bowleyana HOM05D006570 ORTHO05D008193 0.0e+00 1191.0 612 100.0
SalBow6G3933 Salvia bowleyana HOM05D006570 ORTHO05D008193 1.0e-271 939.9 488 99.0
Migut.D00755 Erythranthe guttata HOM05D006570 ORTHO05D008193 5.4e-193 678.3 489 71.6
Oeu020442.2 Olea europaea HOM05D006570 ORTHO05D008193 4.9e-178 628.6 455 71.4
Lj2A1109T67 Lonicera japonica HOM05D006570 ORTHO05D008193 3.8e-162 575.9 427 68.9
Sopen09g012610 Solanum pennellii HOM05D006570 ORTHO05D008193 1.1e-161 574.3 441 65.5
Dinv28772 Davidia involucrata HOM05D006570 ORTHO05D008193 1.4e-161 573.9 446 65.9
Solyc09g018850.3 Solanum lycopersicum HOM05D006570 ORTHO05D008193 2.4e-161 573.2 441 65.3
PGSC0003DMG400020287 Solanum tuberosum HOM05D006570 ORTHO05D008193 1.1e-158 564.3 446 64.6
Atru.chr6.3468 Acer truncatum HOM05D006570 ORTHO05D008193 8.2e-157 558.1 431 65.2
Actinidia11648 Actinidia chinensis HOM05D006570 ORTHO05D008193 1.1e-156 557.8 506 60.9
vmacro02851 Vaccinium macrocarpon HOM05D006570 ORTHO05D008193 4.0e-156 555.8 447 66.0
Nitab4.5_0005967g0010 Nicotiana tabacum HOM05D006570 ORTHO05D008193 2.6e-155 553.1 414 67.6
Peaxi162Scf12724g00014 Petunia axillaris HOM05D006570 ORTHO05D008193 8.4e-154 548.1 480 60.8
TWI18G1431 Tripterygium wilfordii HOM05D006570 ORTHO05D008193 2.5e-153 546.6 450 61.1
CANSAT01G0840 Cannabis sativa HOM05D006570 ORTHO05D008193 5.5e-153 545.4 439 64.2
HanXRQChr16g0508391 Helianthus annuus HOM05D006570 ORTHO05D008193 7.1e-153 545.0 466 60.9
TAR362G0032 Trochodendron aralioides HOM05D006570 ORTHO05D008193 1.0e-151 541.2 448 62.1
Cfa006298 Carpinus fangiana HOM05D006570 ORTHO05D008193 3.0e-151 539.7 438 61.9
Haze_04512 Corylus avellana HOM05D006570 ORTHO05D008193 3.9e-151 539.3 430 62.1
Hma1.2p1_0834F.1_g225720 Hydrangea macrophylla HOM05D006570 ORTHO05D008193 6.7e-151 538.5 402 67.4
Nitab4.5_0009028g0030 Nicotiana tabacum HOM05D006570 ORTHO05D008193 1.9e-150 537.0 440 63.9
ECA236G3480 Erigeron canadensis HOM05D006570 ORTHO05D008193 3.3e-150 536.2 431 64.0
Ciclev10015195m.g Citrus clementina HOM05D006570 ORTHO05D008193 9.7e-150 534.6 431 62.6
Manes.13G058200 Manihot esculenta HOM05D006570 ORTHO05D008193 1.3e-149 534.3 450 60.4
Ah.11g050650 Amaranthus hybridus HOM05D006570 ORTHO05D008193 1.6e-149 533.9 459 61.0
Cc01_g15710 Coffea canephora HOM05D006570 ORTHO05D008193 2.8e-149 533.1 447 61.7
Duzib133G0843 Durio zibethinus HOM05D006570 ORTHO05D008193 4.8e-149 532.3 457 60.4
Potri.014G198000 Populus trichocarpa HOM05D006570 ORTHO05D008193 1.8e-148 530.4 460 61.1
FvH4_3g28500 Fragaria vesca HOM05D006570 ORTHO05D008193 4.1e-148 529.3 471 60.3
Prupe.6G214800 Prunus persica HOM05D006570 ORTHO05D008193 4.1e-148 529.3 421 63.4
RcHm_v2.0_Chr5g0052821 Rosa chinensis HOM05D006570 ORTHO05D008193 1.0e-146 524.6 458 61.4
Ca_23570_v3 Cicer arietinum L. HOM05D006570 ORTHO05D008193 2.2e-146 523.5 444 59.9
Ca_23579_v3 Cicer arietinum L. HOM05D006570 ORTHO05D008193 2.2e-146 523.5 444 59.9
Lj3g0023743 Lotus japonicus HOM05D006570 ORTHO05D008193 2.2e-146 523.5 473 57.5
FAN21G3910 Fragaria x ananassa HOM05D006570 ORTHO05D008193 5.0e-146 522.3 478 60.5
Gohir.D07G093500 Gossypium hirsutum HOM05D006570 ORTHO05D008193 8.5e-146 521.5 439 62.0
Gorai.001G100200 Gossypium raimondii HOM05D006570 ORTHO05D008193 8.5e-146 521.5 439 62.0
Aa31sc565G50 Aethionema arabicum HOM05D006570 ORTHO05D008193 2.1e-144 516.9 417 60.9
MBI10_g46813_MAGBIO Magnolia biondii HOM05D006570 ORTHO05D008193 2.1e-144 516.9 496 56.9
CiPaw.07G077200 Carya illinoinensis HOM05D006570 ORTHO05D008193 4.6e-144 515.8 439 59.0
Thecc.01G203700 Theobroma cacao HOM05D006570 ORTHO05D008193 4.6e-144 515.8 452 60.2
GSVIVG01004124001 Vitis vinifera HOM05D006570 ORTHO05D008193 6.1e-144 515.4 466 59.2
Medtr8g028105 Medicago truncatula HOM05D006570 ORTHO05D008193 1.0e-143 514.6 449 59.7
Gohir.A07G088500 Gossypium hirsutum HOM05D006570 ORTHO05D008193 1.3e-143 514.2 438 62.1
BcaC02g09469 Brassica carinata HOM05D006570 ORTHO05D008193 1.8e-143 513.8 447 59.7
arahy.Tifrunner.gnm1.ann1.N5JW36 Arachis hypogaea HOM05D006570 ORTHO05D008193 2.3e-143 513.5 471 55.8
Carub.0007s3008 Capsella rubella HOM05D006570 ORTHO05D008193 3.0e-143 513.1 444 59.7
Cpa.g.sc8.9 Carica papaya HOM05D006570 ORTHO05D008193 3.9e-143 512.7 442 60.6
CsaV3_6G007600 Cucumis sativus L. HOM05D006570 ORTHO05D008193 3.9e-143 512.7 449 58.4
CAN.G3.13 Capsicum annuum HOM05D006570 ORTHO05D008193 1.1e-142 511.1 383 66.8
COL.COLO4_19720 Corchorus olitorius HOM05D006570 ORTHO05D008193 1.1e-142 511.1 404 63.9
BcaB03g16147 Brassica carinata HOM05D006570 ORTHO05D008193 1.5e-142 510.8 441 59.9
ClCG06G001630 Citrullus lanatus HOM05D006570 ORTHO05D008193 1.9e-142 510.4 454 59.3
Phvul.010G109900 Phaseolus vulgaris HOM05D006570 ORTHO05D008193 1.9e-142 510.4 438 60.3
AL9U11910 Arabidopsis lyrata HOM05D006570 ORTHO05D008193 4.3e-142 509.2 453 58.3
A04p09180 Brassica napus HOM05D006570 ORTHO05D008193 7.4e-142 508.4 485 55.5
C04p43140 Brassica napus HOM05D006570 ORTHO05D008193 7.4e-142 508.4 455 58.2
Glyma.07G059700 Glycine max HOM05D006570 ORTHO05D008193 7.4e-142 508.4 430 60.7
CARHR218120 Cardamine hirsuta HOM05D006570 ORTHO05D008193 2.2e-141 506.9 442 59.3
Lalb_Chr10g0100201 Lupinus albus HOM05D006570 ORTHO05D008193 8.2e-141 505.0 455 58.2
THA.LOC104815379 Tarenaya hassleriana HOM05D006570 ORTHO05D008193 8.2e-141 505.0 445 58.7
PSO170G2695 Papaver somniferum HOM05D006570 ORTHO05D008193 3.1e-140 503.1 435 59.5
arahy.Tifrunner.gnm1.ann1.L2UBUE Arachis hypogaea HOM05D006570 ORTHO05D008193 4.1e-140 502.7 470 54.7
MD15G1141300 Malus domestica HOM05D006570 ORTHO05D008193 5.3e-140 502.3 409 63.8
VMungo0331G0798 Vigna mungo HOM05D006570 ORTHO05D008193 5.3e-140 502.3 456 58.1
Aqoxy7G03970 Aquilegia oxysepala HOM05D006570 ORTHO05D008193 2.0e-139 500.4 463 58.3
TPR.G5123 Trifolium pratense HOM05D006570 ORTHO05D008193 2.6e-139 500.0 446 57.6
Aqoxy1G01428 Aquilegia oxysepala HOM05D006570 ORTHO05D008193 3.4e-139 499.6 463 58.3
EL10Ac5g10565 Beta vulgaris HOM05D006570 ORTHO05D008193 3.4e-139 499.6 454 58.6
Sp7g09050 Schrenkiella parvula HOM05D006570 ORTHO05D008193 3.4e-139 499.6 441 58.0
HPP92_007590 Vanilla planifolia HOM05D006570 ORTHO05D008193 3.4e-139 499.6 446 59.6
AT4G12740 Arabidopsis thaliana HOM05D006570 ORTHO05D008193 5.9e-139 498.8 429 59.4
Sabra14G0132400 Salix brachista HOM05D006570 ORTHO05D008193 8.5e-138 495.0 544 52.2
Thhalv10024575m.g Eutrema salsugineum HOM05D006570 ORTHO05D008193 1.1e-137 494.6 430 58.1
Sc05g0001500 Simmondsia chinensis HOM05D006570 ORTHO05D008193 7.2e-137 491.9 483 54.2
PGR083G1749 Punica granatum HOM05D006570 ORTHO05D008193 1.6e-136 490.7 420 60.7
BolC4t25891H Brassica oleracea HOM05D006570 ORTHO05D008193 1.4e-135 487.6 445 57.3
CDE09G0147 Ceratophyllum demersum HOM05D006570 ORTHO05D008193 3.9e-135 486.1 408 61.5
DCAR_012712 Daucus carota HOM05D006570 ORTHO05D008193 2.0e-134 483.8 405 61.5
AUR62032342 Chenopodium quinoa HOM05D006570 ORTHO05D008193 4.4e-134 482.6 462 56.7
AUR62008045 Chenopodium quinoa HOM05D006570 ORTHO05D008193 1.3e-133 481.1 462 56.5
BraA04t16613Z Brassica rapa HOM05D006570 ORTHO05D008193 3.7e-133 479.6 484 53.1
ATR0743G076 Amborella trichopoda HOM05D006570 ORTHO05D008193 6.3e-133 478.8 419 59.7
AUR62028620 Chenopodium quinoa HOM05D006570 ORTHO05D008193 8.2e-133 478.4 435 58.4
Rhsim13G0056200 Rhododendron simsii HOM05D006570 ORTHO05D008193 1.4e-132 477.6 393 64.4
Hund09495 Selenicereus undatus HOM05D006570 ORTHO05D008193 6.9e-132 475.3 378 63.0
Lsat_1_v5_gn_8_98640 Lactuca sativa HOM05D006570 ORTHO05D008193 7.7e-131 471.9 443 58.7
Os12g0211400 Oryza sativa ssp. japonica HOM05D006570 ORTHO05D008193 1.7e-130 470.7 421 57.7
Psat4g158840 Pisum sativum HOM05D006570 ORTHO05D008193 3.8e-130 469.5 377 61.8
Zm00001eb411200 Zea mays HOM05D006570 ORTHO05D008193 3.3e-126 456.4 489 51.5
unitig_90.g27554 Utricularia gibba HOM05D006570 ORTHO05D008193 5.3e-124 449.1 442 55.7
MELO3C022371.2 Cucumis melo HOM05D006570 ORTHO05D008193 5.9e-123 445.7 419 55.6
SHI10196 Sapria himalayana HOM05D006570 ORTHO05D008193 5.5e-121 439.1 451 51.4
Hma1.2p1_0834F.1_g225710 Hydrangea macrophylla HOM05D006570 ORTHO05D008193 7.2e-121 438.7 366 62.8
Os12g0212100 Oryza sativa ssp. japonica HOM05D006570 ORTHO05D008193 9.4e-121 438.3 350 63.4
SEGI_12299 Sequoiadendron giganteum HOM05D006570 ORTHO05D008193 2.1e-120 437.2 464 53.0
Pp3c18_200 Physcomitrium patens HOM05D006570 ORTHO05D008193 1.3e-106 391.3 493 47.3
Actinidia23139 Actinidia chinensis HOM05D006570 ORTHO05D008193 2.3e-106 390.6 446 50.2
FAN25G2405 Fragaria x ananassa HOM05D006570 ORTHO05D008193 1.8e-103 380.9 521 45.7
Hma1.2p1_1756F.1_g301050 Hydrangea macrophylla HOM05D006570 ORTHO05D008193 3.0e-103 380.2 319 62.1
Mapoly0043s0062 Marchantia polymorpha HOM05D006570 ORTHO05D008193 1.2e-96 358.2 515 41.9
Eucgr.H00676 Eucalyptus grandis HOM05D006570 ORTHO05D008193 8.9e-95 352.1 311 60.5
MBI10_g40441_MAGBIO Magnolia biondii HOM05D006570 ORTHO05D008193 5.8e-94 349.4 318 58.5
SMO202G0040 Selaginella moellendorffii HOM05D006570 ORTHO05D008193 3.7e-77 293.5 295 53.9
FAN11G0847 Fragaria x ananassa HOM05D006570 ORTHO05D008193 5.1e-74 283.1 247 58.3
MCO12G048 Micromonas commoda HOM05D006570 ORTHO05D008193 8.6e-74 282.3 521 38.2
PRCOL_00001086 Prasinoderma coloniale HOM05D006570 ORTHO05D008193 9.5e-73 278.9 404 42.6
QL01p050877 Quercus lobata HOM05D006570 ORTHO05D008193 4.6e-67 260.0 271 51.7
Cre02.g082000 Chlamydomonas reinhardtii HOM05D006570 ORTHO05D008193 3.3e-57 227.3 521 31.9
CSS0008113 Camellia sinensis var. sinensis HOM05D006570 ORTHO05D008193 1.8e-50 204.9 126 77.8
CSS0032158 Camellia sinensis var. sinensis HOM05D006570 ORTHO05D008193 1.8e-50 204.9 126 77.8
GSVIVG01038286001 Vitis vinifera HOM05D006570 ORTHO05D008193 1.1e-49 202.2 186 57.0
Ca_29093_v3 Cicer arietinum L. HOM05D006570 ORTHO05D008193 5.6e-41 173.3 290 36.9
DCAR_012713 Daucus carota HOM05D006570 ORTHO05D008193 1.2e-38 165.6 134 59.0
QL01p050896 Quercus lobata HOM05D006570 ORTHO05D008193 3.4e-38 164.1 115 65.2
CDE02G1275 Ceratophyllum demersum HOM05D006570 ORTHO05D008193 2.2e-32 144.8 129 58.1
QL05p014267 Quercus lobata HOM05D006570 ORTHO05D008193 2.3e-26 124.8 190 40.0
CBR_g38520 Chara braunii HOM05D000019 ORTHO05D000048 1.2e-22 112.5 81 63.0
Glyma.16G028601 Glycine max HOM05D006570 ORTHO05D008193 6.5e-21 106.7 111 47.7
QL05p014599 Quercus lobata HOM05D006570 ORTHO05D008193 3.6e-19 100.9 128 46.9
PGR142G0081 Punica granatum HOM05D006570 ORTHO05D008193 9.7e-17 92.8 119 47.1
CBR_g38518 Chara braunii HOM05D000019 ORTHO05D000048 9.7e-09 66.2 148 30.4
Psat7g213960 Pisum sativum HOM05D004358 ORTHO05D004960 1.6e-06 58.9 202 26.2
Lalb_Chr01g0003211 Lupinus albus HOM05D004358 ORTHO05D004960 4.5e-06 57.4 222 24.8
TPR.G34203 Trifolium pratense HOM05D004358 ORTHO05D004960 5.9e-06 57.0 202 25.7
Ca_20780_v3 Cicer arietinum L. HOM05D004358 ORTHO05D004960 7.7e-06 56.6 202 26.2
Medtr4g067060 Medicago truncatula HOM05D004358 ORTHO05D004960 7.7e-06 56.6 202 25.7
Zm00001eb406830 Zea mays HOM05D004358 ORTHO05D004960 7.7e-06 56.6 216 25.9


User provided reference genes

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