Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra18G0120400 Salix brachista HOM05D001007 ORTHO05D349360 6.1e-95 350.9 188 100.0
Potri.006G078000 Populus trichocarpa HOM05D001007 ORTHO05D002932 5.4e-11 72.0 86 52.3
Sabra18G0127900 Salix brachista HOM05D001007 ORTHO05D029950 4.6e-10 68.9 104 47.1
Manes.18G138900 Manihot esculenta HOM05D001007 ORTHO05D002932 6.0e-10 68.6 86 51.2
Aqoxy7G02671 Aquilegia oxysepala HOM05D001007 ORTHO05D002932 1.3e-09 67.4 86 48.8
ClCG11G011450 Citrullus lanatus HOM05D001007 ORTHO05D002932 2.3e-09 66.6 92 47.8
MELO3C003935.2 Cucumis melo HOM05D001007 ORTHO05D002932 2.3e-09 66.6 92 47.8
CsaV3_2G009040 Cucumis sativus L. HOM05D001007 ORTHO05D002932 2.3e-09 66.6 92 47.8
MD16G1238700 Malus domestica HOM05D001007 ORTHO05D002932 8.7e-09 64.7 86 47.7
Cfa020741 Carpinus fangiana HOM05D001007 ORTHO05D002932 1.1e-08 64.3 86 47.7
Haze_19057 Corylus avellana HOM05D001007 ORTHO05D002932 1.1e-08 64.3 86 47.7
Sed0020596 Sechium edule HOM05D001007 ORTHO05D002932 1.1e-08 64.3 86 47.7
Thecc.09G194800 Theobroma cacao HOM05D001007 ORTHO05D002932 2.5e-08 63.2 86 45.3
RcHm_v2.0_Chr4g0397751 Rosa chinensis HOM05D001007 ORTHO05D002932 3.3e-08 62.8 86 46.5
Dinv12607 Davidia involucrata HOM05D001007 ORTHO05D002932 4.3e-08 62.4 86 47.7
PGR142G2022 Punica granatum HOM05D001007 ORTHO05D002932 4.3e-08 62.4 86 48.8
Prupe.1G065000 Prunus persica HOM05D001007 ORTHO05D002932 5.6e-08 62.0 92 44.6
MD13G1234200 Malus domestica HOM05D001007 ORTHO05D002932 7.4e-08 61.6 86 46.5
MBI16_g37217_MAGBIO Magnolia biondii HOM05D001007 ORTHO05D002932 9.6e-08 61.2 86 44.2
Gohir.A13G182000 Gossypium hirsutum HOM05D001007 ORTHO05D002932 1.3e-07 60.8 79 50.6
Cpa.g.sc115.29 Carica papaya HOM05D001007 ORTHO05D002932 1.6e-07 60.5 86 44.2
Oeu028825.1 Olea europaea HOM05D001007 ORTHO05D002932 1.6e-07 60.5 86 44.2
AT2G06990 Arabidopsis thaliana HOM05D001007 ORTHO05D002932 2.1e-07 60.1 39 82.1
Ciclev10018695m.g Citrus clementina HOM05D001007 ORTHO05D002932 2.1e-07 60.1 86 44.2
Thhalv10019987m.g Eutrema salsugineum HOM05D001007 ORTHO05D002932 2.1e-07 60.1 39 82.1
Nn5g27075 Nelumbo nucifera HOM05D001007 ORTHO05D002932 2.1e-07 60.1 92 43.5
Peaxi162Scf00954g00227 Petunia axillaris HOM05D001007 ORTHO05D002932 2.1e-07 60.1 88 42.0
CiPaw.15G156200 Carya illinoinensis HOM05D001007 ORTHO05D002932 2.8e-07 59.7 39 82.1
Eucgr.C00066 Eucalyptus grandis HOM05D001007 ORTHO05D002932 2.8e-07 59.7 92 44.6
QL11p008827 Quercus lobata HOM05D001007 ORTHO05D002932 2.8e-07 59.7 86 44.2
Atru.chr12.1185 Acer truncatum HOM05D001007 ORTHO05D002932 3.7e-07 59.3 39 79.5
CSS0018446 Camellia sinensis var. sinensis HOM05D001007 ORTHO05D002932 3.7e-07 59.3 86 41.9
Carub.0003s2734 Capsella rubella HOM05D001007 ORTHO05D002932 3.7e-07 59.3 39 82.1
Lj4g0027172 Lotus japonicus HOM05D001007 ORTHO05D002932 3.7e-07 59.3 39 82.1
Lalb_Chr05g0223741 Lupinus albus HOM05D001007 ORTHO05D002932 3.7e-07 59.3 39 82.1
Lalb_Chr16g0390771 Lupinus albus HOM05D001007 ORTHO05D002932 3.7e-07 59.3 39 82.1
CANSAT01G0746 Cannabis sativa HOM05D001007 ORTHO05D002932 4.8e-07 58.9 39 79.5
Nitab4.5_0005753g0010 Nicotiana tabacum HOM05D001007 ORTHO05D002932 4.8e-07 58.9 86 41.9
Sp3g08000 Schrenkiella parvula HOM05D001007 ORTHO05D002932 4.8e-07 58.9 39 79.5
TAR383G0411 Trochodendron aralioides HOM05D001007 ORTHO05D002932 4.8e-07 58.9 86 45.3
FvH4_4g06170 Fragaria vesca HOM05D001007 ORTHO05D002932 6.2e-07 58.5 86 44.2
FAN12G0801 Fragaria x ananassa HOM05D001007 ORTHO05D002932 6.2e-07 58.5 86 44.2
FAN22G2217 Fragaria x ananassa HOM05D001007 ORTHO05D002932 6.2e-07 58.5 86 44.2
Psat7g021600 Pisum sativum HOM05D001007 ORTHO05D002932 6.2e-07 58.5 39 79.5
ATR0626G366 Amborella trichopoda HOM05D001007 ORTHO05D002932 8.1e-07 58.2 86 44.2
Nitab4.5_0000404g0240 Nicotiana tabacum HOM05D001007 ORTHO05D002932 8.1e-07 58.2 86 41.9
Phvul.002G303000 Phaseolus vulgaris HOM05D001007 ORTHO05D002932 8.1e-07 58.2 39 79.5
Solyc05g047520.4 Solanum lycopersicum HOM05D001007 ORTHO05D002932 8.1e-07 58.2 86 41.9
Sopen05g027830 Solanum pennellii HOM05D001007 ORTHO05D002932 8.1e-07 58.2 86 41.9
PGSC0003DMG400013698 Solanum tuberosum HOM05D001007 ORTHO05D002932 8.1e-07 58.2 86 41.9
Aa31sc441G20 Aethionema arabicum HOM05D001007 ORTHO05D002932 1.1e-06 57.8 39 76.9
AL3G43950 Arabidopsis lyrata HOM05D001007 ORTHO05D002932 1.1e-06 57.8 39 79.5
Dinv26473 Davidia involucrata HOM05D001007 ORTHO05D002932 1.1e-06 57.8 85 43.5
ECA234G1918 Erigeron canadensis HOM05D001007 ORTHO05D002932 1.1e-06 57.8 64 54.7
Glyma.08G027700 Glycine max HOM05D001007 ORTHO05D002932 1.1e-06 57.8 39 79.5
Gohir.D13G185200 Gossypium hirsutum HOM05D001007 ORTHO05D002932 1.1e-06 57.8 79 49.4
Gorai.013G211300 Gossypium raimondii HOM05D001007 ORTHO05D002932 1.1e-06 57.8 79 49.4
Nitab4.5_0005105g0010 Nicotiana tabacum HOM05D001007 ORTHO05D002932 1.1e-06 57.8 86 41.9
PSO170G5833 Papaver somniferum HOM05D001007 ORTHO05D002932 1.1e-06 57.8 86 43.0
VMungo0251G0726 Vigna mungo HOM05D001007 ORTHO05D002932 1.1e-06 57.8 39 79.5
Lju50A17G32 Lonicera japonica HOM05D001007 ORTHO05D002932 1.4e-06 57.4 79 46.8
Manes.13G093250 Manihot esculenta HOM05D002595 ORTHO05D003064 1.4e-06 57.4 37 83.8
Os11g0176200 Oryza sativa ssp. japonica HOM05D001007 ORTHO05D002932 1.4e-06 57.4 63 57.1
DCAR_009044 Daucus carota HOM05D001007 ORTHO05D002932 1.8e-06 57.0 79 48.1
Rhsim07G0245300 Rhododendron simsii HOM05D001007 ORTHO05D002932 1.8e-06 57.0 86 41.9
THA.LOC104808911 Tarenaya hassleriana HOM05D001007 ORTHO05D002932 1.8e-06 57.0 39 79.5
GSVIVG01032255001 Vitis vinifera HOM05D001007 ORTHO05D002932 1.8e-06 57.0 79 48.1
CAN.G106.8 Capsicum annuum HOM05D001007 ORTHO05D002932 2.4e-06 56.6 86 39.5
Oeu062952.1 Olea europaea HOM05D001007 ORTHO05D002932 2.4e-06 56.6 70 51.4
Sc23g0004350 Simmondsia chinensis HOM05D001007 ORTHO05D002932 2.4e-06 56.6 92 39.1
arahy.Tifrunner.gnm1.ann1.612ZK0 Arachis hypogaea HOM05D001007 ORTHO05D002932 3.1e-06 56.2 39 76.9
arahy.Tifrunner.gnm1.ann1.N68NTR Arachis hypogaea HOM05D001007 ORTHO05D002932 3.1e-06 56.2 39 76.9
Cc00_g00180 Coffea canephora HOM05D001007 ORTHO05D002932 3.1e-06 56.2 86 43.0
Duzib170G0417 Durio zibethinus HOM05D001007 ORTHO05D002932 3.1e-06 56.2 79 48.1
Peaxi162Scf00006g03312 Petunia axillaris HOM05D001007 ORTHO05D002932 3.1e-06 56.2 86 40.7
vmacro22293 Vaccinium macrocarpon HOM05D001007 ORTHO05D002932 3.1e-06 56.2 86 41.9
Ca_17425_v3 Cicer arietinum L. HOM05D001007 ORTHO05D002932 4.0e-06 55.8 39 76.9
FAN07G1844 Fragaria x ananassa HOM05D001007 ORTHO05D002932 4.0e-06 55.8 86 43.0
Lsat_1_v5_gn_5_81421 Lactuca sativa HOM05D001007 ORTHO05D002932 4.0e-06 55.8 37 81.1
Actinidia38524 Actinidia chinensis HOM05D001007 ORTHO05D002932 5.3e-06 55.5 86 40.7
MSTRG.19396 Avicennia marina HOM05D001007 ORTHO05D002932 5.3e-06 55.5 63 52.4
HanXRQChr10g0309581 Helianthus annuus HOM05D001007 ORTHO05D002932 5.3e-06 55.5 79 46.8
PSO063G7144 Papaver somniferum HOM05D001007 ORTHO05D002932 5.3e-06 55.5 79 45.6
Sopen12g008680 Solanum pennellii HOM05D001007 ORTHO05D002932 5.3e-06 55.5 39 74.4
HanXRQChr12g0359191 Helianthus annuus HOM05D001007 ORTHO05D002932 6.9e-06 55.1 63 52.4
unitig_22.g6570 Utricularia gibba HOM05D001007 ORTHO05D002932 6.9e-06 55.1 79 45.6
Zm00001eb337140 Zea mays HOM05D001007 ORTHO05D002932 6.9e-06 55.1 39 74.4
Rhsim07G0245200 Rhododendron simsii HOM05D001007 ORTHO05D002932 9.0e-06 54.7 86 40.7
TPR.G25490 Trifolium pratense HOM05D001007 ORTHO05D002932 9.0e-06 54.7 92 41.3


User provided reference genes

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