Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra13G0008800 Salix brachista HOM05D005935 ORTHO05D007012 7.5e-116 420.6 226 100.0
Potri.013G010300 Populus trichocarpa HOM05D005935 ORTHO05D007012 3.8e-43 179.1 226 57.1
Ah.06g188880 Amaranthus hybridus HOM05D005935 ORTHO05D007012 1.2e-41 174.1 224 48.7
arahy.Tifrunner.gnm1.ann1.7UDZ1N Arachis hypogaea HOM05D005935 ORTHO05D007012 1.0e-40 171.0 215 56.3
arahy.Tifrunner.gnm1.ann1.G5WI6L Arachis hypogaea HOM05D005935 ORTHO05D007012 5.1e-40 168.7 220 54.1
arahy.Tifrunner.gnm1.ann1.H1X696 Arachis hypogaea HOM05D005935 ORTHO05D007012 5.1e-40 168.7 220 54.1
arahy.Tifrunner.gnm1.ann1.I9BDFC Arachis hypogaea HOM05D005935 ORTHO05D007012 6.7e-40 168.3 217 55.3
MSTRG.27950 Avicennia marina HOM05D005935 ORTHO05D007012 6.7e-40 168.3 224 46.9
Migut.N01391 Erythranthe guttata HOM05D005935 ORTHO05D007012 6.7e-40 168.3 223 46.6
Glyma.03G231900 Glycine max HOM05D005935 ORTHO05D007012 6.7e-40 168.3 220 54.5
Glyma.19G228900 Glycine max HOM05D005935 ORTHO05D007012 6.7e-40 168.3 220 51.4
Phvul.001G225500 Phaseolus vulgaris HOM05D005935 ORTHO05D007012 6.7e-40 168.3 220 51.4
EL10Ac4g09829 Beta vulgaris HOM05D005935 ORTHO05D007012 8.8e-40 167.9 225 46.7
HanXRQChr10g0299201 Helianthus annuus HOM05D005935 ORTHO05D007012 1.1e-39 167.5 225 52.0
Hma1.2p1_0008F-1.1_g005750 Hydrangea macrophylla HOM05D005935 ORTHO05D007012 1.5e-39 167.2 224 51.8
Cpa.g.sc48.144 Carica papaya HOM05D005935 ORTHO05D007012 2.0e-39 166.8 223 53.4
Thecc.05G321000 Theobroma cacao HOM05D005935 ORTHO05D007012 2.0e-39 166.8 225 52.4
SGA_v2.0_scaffold81G26126 Striga asiatica HOM05D005935 ORTHO05D007012 2.5e-39 166.4 222 46.8
Zm00001eb121760 Zea mays HOM05D005935 ORTHO05D007012 2.5e-39 166.4 213 49.3
Ca_09298_v3 Cicer arietinum L. HOM05D005935 ORTHO05D007012 3.3e-39 166.0 214 52.3
unitig_21.g20172 Utricularia gibba HOM05D005935 ORTHO05D007012 3.3e-39 166.0 223 48.4
CANSAT54G1507 Cannabis sativa HOM05D005935 ORTHO05D007012 4.3e-39 165.6 223 52.9
Lalb_Chr18g0046051 Lupinus albus HOM05D005935 ORTHO05D007012 4.3e-39 165.6 222 53.6
CiPaw.07G028100 Carya illinoinensis HOM05D005935 ORTHO05D007012 5.7e-39 165.2 217 47.5
COL.COLO4_04140 Corchorus olitorius HOM05D005935 ORTHO05D007012 5.7e-39 165.2 219 53.9
Gohir.D08G223300 Gossypium hirsutum HOM05D005935 ORTHO05D007012 5.7e-39 165.2 225 52.4
Gorai.004G237200 Gossypium raimondii HOM05D005935 ORTHO05D007012 5.7e-39 165.2 225 52.4
Manes.09G175700 Manihot esculenta HOM05D005935 ORTHO05D007012 5.7e-39 165.2 226 48.7
QL01p019294 Quercus lobata HOM05D005935 ORTHO05D007012 5.7e-39 165.2 216 54.6
Medtr7g112060 Medicago truncatula HOM05D005935 ORTHO05D007012 7.4e-39 164.9 214 54.2
TAR362G1094 Trochodendron aralioides HOM05D005935 ORTHO05D007012 7.4e-39 164.9 220 47.3
Os03g0831900 Oryza sativa ssp. japonica HOM05D005935 ORTHO05D007012 9.7e-39 164.5 214 48.6
MD12G1207200 Malus domestica HOM05D005935 ORTHO05D007012 1.3e-38 164.1 218 49.5
PGR031G1309 Punica granatum HOM05D005935 ORTHO05D007012 1.3e-38 164.1 222 50.5
SGA_v2.0_scaffold80G25879 Striga asiatica HOM05D005935 ORTHO05D007012 1.3e-38 164.1 224 45.5
AUR62000683 Chenopodium quinoa HOM05D005935 ORTHO05D007012 1.7e-38 163.7 224 52.2
Lalb_Chr04g0260471 Lupinus albus HOM05D005935 ORTHO05D007012 1.7e-38 163.7 213 57.3
SalBow3G1520 Salvia bowleyana HOM05D005935 ORTHO05D007012 1.7e-38 163.7 224 46.4
ClCG02G015080 Citrullus lanatus HOM05D005935 ORTHO05D007012 2.2e-38 163.3 222 45.9
MELO3C004198.2 Cucumis melo HOM05D005935 ORTHO05D007012 2.2e-38 163.3 222 45.9
Gohir.A08G206600 Gossypium hirsutum HOM05D005935 ORTHO05D007012 2.2e-38 163.3 225 52.0
Atru.chr2.148 Acer truncatum HOM05D005935 ORTHO05D007012 2.8e-38 162.9 225 49.3
Cc02_g34830 Coffea canephora HOM05D005935 ORTHO05D007012 2.8e-38 162.9 224 46.4
VMungo1383G1193 Vigna mungo HOM05D005935 ORTHO05D007012 2.8e-38 162.9 211 51.7
GSVIVG01031220001 Vitis vinifera HOM05D005935 ORTHO05D007012 2.8e-38 162.9 225 48.9
Eucgr.H03282 Eucalyptus grandis HOM05D005935 ORTHO05D007012 3.7e-38 162.5 223 46.6
Psat3g013040 Pisum sativum HOM05D005935 ORTHO05D007012 3.7e-38 162.5 215 53.5
Haze_04079 Corylus avellana HOM05D005935 ORTHO05D007012 4.8e-38 162.2 214 47.7
CsaV3_2G006940 Cucumis sativus L. HOM05D005935 ORTHO05D007012 4.8e-38 162.2 222 45.5
Sed0001365 Sechium edule HOM05D005935 ORTHO05D007012 4.8e-38 162.2 221 47.1
Lj1g0021681 Lotus japonicus HOM05D005935 ORTHO05D007012 6.3e-38 161.8 220 50.9
THA.LOC104802776 Tarenaya hassleriana HOM05D005935 ORTHO05D007012 6.3e-38 161.8 227 50.7
Sc09g0002670 Simmondsia chinensis HOM05D005935 ORTHO05D007012 8.2e-38 161.4 224 51.8
Aa31LG5G16170 Aethionema arabicum HOM05D005935 ORTHO05D007012 1.8e-37 160.2 214 45.8
Ciclev10002528m.g Citrus clementina HOM05D005935 ORTHO05D007012 2.4e-37 159.8 226 53.1
Prupe.6G314900 Prunus persica HOM05D005935 ORTHO05D007012 2.4e-37 159.8 222 47.3
Rhsim11G0094200 Rhododendron simsii HOM05D005935 ORTHO05D007012 2.4e-37 159.8 202 50.0
Lsat_1_v5_gn_5_102820 Lactuca sativa HOM05D005935 ORTHO05D007012 3.1e-37 159.5 223 47.1
HPP92_015241 Vanilla planifolia HOM05D005935 ORTHO05D007012 3.1e-37 159.5 211 52.1
RcHm_v2.0_Chr3g0456881 Rosa chinensis HOM05D005935 ORTHO05D007012 4.1e-37 159.1 218 47.2
TWI56G1463 Tripterygium wilfordii HOM05D005935 ORTHO05D007012 4.1e-37 159.1 226 51.8
QL03p018299 Quercus lobata HOM05D005935 ORTHO05D007012 5.3e-37 158.7 217 53.5
ECA234G4853 Erigeron canadensis HOM05D005935 ORTHO05D007012 6.9e-37 158.3 212 55.2
FvH4_6g07240 Fragaria vesca HOM05D005935 ORTHO05D007012 9.1e-37 157.9 219 47.0
Duzib128G1094 Durio zibethinus HOM05D005935 ORTHO05D007012 1.5e-36 157.1 126 76.2
Hund07136 Selenicereus undatus HOM05D005935 ORTHO05D007012 2.0e-36 156.8 126 73.8
TWI36G1229 Tripterygium wilfordii HOM05D005935 ORTHO05D007012 2.0e-36 156.8 223 50.7
MD04G1195100 Malus domestica HOM05D005935 ORTHO05D007012 2.6e-36 156.4 226 46.0
Actinidia16851 Actinidia chinensis HOM05D005935 ORTHO05D007012 4.5e-36 155.6 219 52.5
Dinv24425 Davidia involucrata HOM05D005935 ORTHO05D007012 1.0e-35 154.5 223 45.3
Carub.0003s0513 Capsella rubella HOM05D005935 ORTHO05D007012 2.2e-35 153.3 225 48.4
PSO170G3047 Papaver somniferum HOM05D005935 ORTHO05D007012 5.0e-35 152.1 223 46.6
PSO357G0321 Papaver somniferum HOM05D005935 ORTHO05D007012 5.0e-35 152.1 223 46.6
FAN14G3557 Fragaria x ananassa HOM05D005935 ORTHO05D007012 1.9e-34 150.2 228 45.2
Solyc01g100330.3 Solanum lycopersicum HOM05D005935 ORTHO05D007012 1.9e-34 150.2 220 45.5
Sopen01g043840 Solanum pennellii HOM05D005935 ORTHO05D007012 1.9e-34 150.2 220 45.5
TAR636G0846 Trochodendron aralioides HOM05D005935 ORTHO05D007012 1.9e-34 150.2 225 48.0
FAN02G1619 Fragaria x ananassa HOM05D005935 ORTHO05D007012 2.5e-34 149.8 228 44.7
AT3G05760 Arabidopsis thaliana HOM05D005935 ORTHO05D007012 4.2e-34 149.1 225 47.6
FAN05G5324 Fragaria x ananassa HOM05D005935 ORTHO05D007012 4.2e-34 149.1 234 43.6
FAN09G4449 Fragaria x ananassa HOM05D005935 ORTHO05D007012 4.2e-34 149.1 126 63.5
SEGI_34613 Sequoiadendron giganteum HOM05D005935 ORTHO05D007012 4.2e-34 149.1 217 45.6
PGSC0003DMG400002806 Solanum tuberosum HOM05D005935 ORTHO05D007012 4.2e-34 149.1 220 45.0
Sp3g04650 Schrenkiella parvula HOM05D005935 ORTHO05D007012 7.2e-34 148.3 223 47.1
ATR0767G209 Amborella trichopoda HOM05D005935 ORTHO05D007012 9.4e-34 147.9 222 45.9
BraA05t22944Z Brassica rapa HOM05D002110 ORTHO05D007012 9.4e-34 147.9 225 42.2
PSO478G5244 Papaver somniferum HOM05D005935 ORTHO05D007012 9.4e-34 147.9 223 46.2
Aqoxy2G00839 Aquilegia oxysepala HOM05D005935 ORTHO05D007012 1.2e-33 147.5 214 46.7
Peaxi162Scf00673g00126 Petunia axillaris HOM05D005935 ORTHO05D007012 1.6e-33 147.1 215 45.6
BolC5t34806H Brassica oleracea HOM05D002110 ORTHO05D007012 2.1e-33 146.7 221 42.5
Aqoxy4G02482 Aquilegia oxysepala HOM05D005935 ORTHO05D007012 2.7e-33 146.4 214 46.3
BcaC05g30089 Brassica carinata HOM05D005935 ORTHO05D007012 3.6e-33 146.0 225 41.8
Nitab4.5_0013342g0020 Nicotiana tabacum HOM05D000001 ORTHO05D004269 3.6e-33 146.0 219 44.3
CDE05G0147 Ceratophyllum demersum HOM05D005935 ORTHO05D007012 6.1e-33 145.2 123 65.0
AL3G16500 Arabidopsis lyrata HOM05D005935 ORTHO05D007012 1.0e-32 144.4 225 47.1
BcaC05g29782 Brassica carinata HOM05D005935 ORTHO05D007012 1.0e-32 144.4 219 48.4
vmacro01555 Vaccinium macrocarpon HOM05D005935 ORTHO05D007012 1.0e-32 144.4 254 40.6
C05p61480 Brassica napus HOM05D002110 ORTHO05D007012 1.4e-32 144.1 226 41.2
CAN.G1715.16 Capsicum annuum HOM05D005935 ORTHO05D007012 1.8e-32 143.7 222 44.1
Pp3c4_20180 Physcomitrium patens HOM05D005935 ORTHO05D007012 1.8e-32 143.7 223 47.5
TPR.G1633 Trifolium pratense HOM05D005935 ORTHO05D007012 1.8e-32 143.7 217 45.2
Nn3g21642 Nelumbo nucifera HOM05D005935 ORTHO05D007012 3.0e-32 142.9 222 45.5
CDE11G0767 Ceratophyllum demersum HOM05D005935 ORTHO05D007012 6.7e-32 141.7 223 44.4
Mapoly0111s0002 Marchantia polymorpha HOM05D005935 ORTHO05D007012 2.0e-31 140.2 215 43.7
CARHR080230 Cardamine hirsuta HOM05D005935 ORTHO05D007012 4.4e-31 139.0 226 41.2
AagrBONN_evm.TU.Sc2ySwM_228.1845 Anthoceros agrestis HOM05D005935 ORTHO05D007012 7.4e-31 138.3 121 60.3
AagrBONN_evm.TU.Sc2ySwM_344.1201 Anthoceros agrestis HOM05D005935 ORTHO05D007012 7.4e-31 138.3 118 61.9
AagrBONN_evm.TU.Sc2ySwM_368.1862 Anthoceros agrestis HOM05D005935 ORTHO05D007012 7.4e-31 138.3 118 61.9
CBR_g38440 Chara braunii HOM05D005935 ORTHO05D007012 6.3e-30 135.2 196 50.0
AUR62005273 Chenopodium quinoa HOM05D005935 ORTHO05D007012 4.1e-29 132.5 218 48.2
Nitab4.5_0000155g0010 Nicotiana tabacum HOM05D005935 ORTHO05D007012 5.9e-28 128.6 215 41.4
DCAR_005416 Daucus carota HOM05D005935 ORTHO05D007012 2.9e-27 126.3 181 45.3
SMO201G0167 Selaginella moellendorffii HOM05D005935 ORTHO05D007012 5.0e-27 125.6 218 39.9
CSS0047945 Camellia sinensis var. sinensis HOM05D005935 ORTHO05D007012 8.5e-27 124.8 181 44.2
Lj5A336T44 Lonicera japonica HOM05D005935 ORTHO05D007012 4.2e-26 122.5 82 74.4
CSS0024691 Camellia sinensis var. sinensis HOM05D005935 ORTHO05D007012 2.1e-25 120.2 201 42.3
Thhalv10022198m.g Eutrema salsugineum HOM05D005935 ORTHO05D007012 2.7e-25 119.8 289 34.6
Nitab4.5_0000368g0260 Nicotiana tabacum HOM05D005935 ORTHO05D007012 1.4e-24 117.5 209 39.7
CSS0031844 Camellia sinensis var. sinensis HOM05D005935 ORTHO05D007012 2.0e-23 113.6 202 40.1
CSS0009551 Camellia sinensis var. sinensis HOM05D005935 ORTHO05D007012 7.5e-23 111.7 238 34.5
Hund21747 Selenicereus undatus HOM05D005935 ORTHO05D007012 9.1e-21 104.8 224 35.3
Pp3c12_7700 Physcomitrium patens HOM05D005935 ORTHO05D007012 2.7e-20 103.2 174 42.5
RcHm_v2.0_Chr7g0179971 Rosa chinensis HOM05D005935 ORTHO05D007012 3.5e-20 102.8 115 51.3
Oeu013219.2 Olea europaea HOM05D005935 ORTHO05D007012 4.2e-18 95.9 235 39.6
CSS0034550 Camellia sinensis var. sinensis HOM05D005935 ORTHO05D007012 4.7e-17 92.4 234 33.8
Actinidia35528 Actinidia chinensis HOM05D005935 ORTHO05D007012 4.4e-15 85.9 101 66.3
Cre07.g341650 Chlamydomonas reinhardtii HOM05D005935 ORTHO05D007012 2.9e-11 73.2 259 29.3
Nitab4.5_0007747g0010 Nicotiana tabacum HOM05D005935 ORTHO05D007012 5.5e-10 68.9 124 38.7
FAN04G2955 Fragaria x ananassa HOM05D005935 ORTHO05D007012 1.4e-08 64.3 90 42.2
MCO03G264 Micromonas commoda HOM05D005935 ORTHO05D007012 2.0e-07 60.5 231 27.7


User provided reference genes

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