Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra09G0080600 Salix brachista HOM05D006779 ORTHO05D008491 1.7e-124 449.5 251 100.0
Potri.009G105500 Populus trichocarpa HOM05D006779 ORTHO05D008491 3.9e-121 438.3 251 96.8
Manes.15G142500 Manihot esculenta HOM05D006779 ORTHO05D008491 5.4e-91 338.2 251 76.1
FAN15G3147 Fragaria x ananassa HOM05D006779 ORTHO05D008491 1.8e-86 323.2 253 73.5
CiPaw.05G054000 Carya illinoinensis HOM05D006779 ORTHO05D008491 4.0e-86 322.0 253 74.7
CsaV3_7G008730 Cucumis sativus L. HOM05D006779 ORTHO05D008491 4.0e-86 322.0 252 72.6
FAN20G2937 Fragaria x ananassa HOM05D006779 ORTHO05D008491 4.0e-86 322.0 253 73.1
FAN24G0787 Fragaria x ananassa HOM05D006779 ORTHO05D008491 4.0e-86 322.0 253 73.9
FvH4_2g06680 Fragaria vesca HOM05D006779 ORTHO05D008491 6.9e-86 321.2 253 73.9
Dinv23582 Davidia involucrata HOM05D006779 ORTHO05D008491 6.4e-84 314.7 263 70.7
Sed0011670 Sechium edule HOM05D006779 ORTHO05D008491 7.1e-83 311.2 252 70.2
Prupe.8G119200 Prunus persica HOM05D006779 ORTHO05D008491 1.2e-82 310.5 251 72.5
RcHm_v2.0_Chr6g0258731 Rosa chinensis HOM05D006779 ORTHO05D008491 3.5e-82 308.9 253 70.0
QL11p037315 Quercus lobata HOM05D006779 ORTHO05D008491 7.9e-82 307.8 251 72.1
Haze_01903 Corylus avellana HOM05D006779 ORTHO05D008491 1.3e-81 307.0 253 71.5
Dinv42131 Davidia involucrata HOM05D006779 ORTHO05D008491 6.7e-81 304.7 264 69.7
MD05G1075500 Malus domestica HOM05D006779 ORTHO05D008491 1.1e-80 303.9 251 71.3
GSVIVG01031784001 Vitis vinifera HOM05D006779 ORTHO05D008491 1.9e-80 303.1 254 71.3
PGR142G0644 Punica granatum HOM05D006779 ORTHO05D008491 1.3e-79 300.4 253 71.1
TWI79G0004 Tripterygium wilfordii HOM05D006779 ORTHO05D008491 1.6e-79 300.1 255 70.2
Cc02_g18560 Coffea canephora HOM05D006779 ORTHO05D008491 4.0e-78 295.4 262 66.8
CSS0011815 Camellia sinensis var. sinensis HOM05D000591 ORTHO05D000579 1.5e-77 293.5 258 64.7
Eucgr.I01169 Eucalyptus grandis HOM05D006779 ORTHO05D008491 1.5e-77 293.5 256 67.6
Solyc01g108430.3 Solanum lycopersicum HOM05D006779 ORTHO05D008491 5.8e-77 291.6 263 65.8
Thecc.02G097400 Theobroma cacao HOM05D006779 ORTHO05D008491 7.6e-77 291.2 251 71.3
Atru.chr5.2773 Acer truncatum HOM05D006779 ORTHO05D008491 1.3e-76 290.4 253 71.9
Nitab4.5_0004334g0110 Nicotiana tabacum HOM05D006779 ORTHO05D008491 6.5e-76 288.1 263 65.8
Sopen01g050660 Solanum pennellii HOM05D006779 ORTHO05D008491 6.5e-76 288.1 263 65.0
ClCG02G005780 Citrullus lanatus HOM05D006779 ORTHO05D008491 1.9e-75 286.6 294 60.2
PGSC0003DMG400025811 Solanum tuberosum HOM05D006779 ORTHO05D008491 1.9e-75 286.6 263 65.0
CANSAT25G0176 Cannabis sativa HOM05D006779 ORTHO05D008491 2.5e-75 286.2 253 69.2
Ciclev10029963m.g Citrus clementina HOM05D006779 ORTHO05D008491 3.2e-75 285.8 254 69.3
Actinidia00459 Actinidia chinensis HOM05D006779 ORTHO05D008491 2.1e-74 283.1 259 62.5
TWI31G0027 Tripterygium wilfordii HOM05D006779 ORTHO05D008491 3.5e-74 282.3 255 67.1
Gorai.005G240600 Gossypium raimondii HOM05D006779 ORTHO05D008491 1.0e-73 280.8 251 68.9
Phvul.007G247000 Phaseolus vulgaris HOM05D006779 ORTHO05D008491 1.0e-73 280.8 248 62.1
arahy.Tifrunner.gnm1.ann1.T066AP Arachis hypogaea HOM05D006779 ORTHO05D008491 1.3e-73 280.4 250 67.6
Gohir.D02G212600 Gossypium hirsutum HOM05D006779 ORTHO05D008491 1.3e-73 280.4 251 68.9
arahy.Tifrunner.gnm1.ann1.8ZG09Z Arachis hypogaea HOM05D006779 ORTHO05D008491 1.5e-72 276.9 251 67.3
Gohir.A03G191700 Gossypium hirsutum HOM05D006779 ORTHO05D008491 1.5e-72 276.9 252 68.7
Oeu064516.1 Olea europaea HOM05D006779 ORTHO05D008491 4.3e-72 275.4 263 63.1
Lalb_Chr09g0328181 Lupinus albus HOM05D006779 ORTHO05D008491 1.3e-71 273.9 249 66.7
Glyma.01G146900 Glycine max HOM05D006779 ORTHO05D008491 3.7e-71 272.3 248 64.5
Glyma.10G112900 Glycine max HOM05D006779 ORTHO05D008491 3.7e-71 272.3 248 64.5
Nitab4.5_0005583g0020 Nicotiana tabacum HOM05D006779 ORTHO05D008491 4.8e-71 271.9 263 63.5
Sc18g0004890 Simmondsia chinensis HOM05D006779 ORTHO05D008491 6.2e-71 271.6 254 67.3
COL.COLO4_32686 Corchorus olitorius HOM05D006779 ORTHO05D008491 2.4e-70 269.6 251 69.3
Migut.B00314 Erythranthe guttata HOM05D006779 ORTHO05D008491 4.1e-70 268.9 267 63.7
vmacro02181 Vaccinium macrocarpon HOM05D006779 ORTHO05D008491 1.5e-69 266.9 295 54.9
Rhsim11G0168500 Rhododendron simsii HOM05D006779 ORTHO05D008491 2.0e-69 266.5 291 55.0
Aa31LG10G4420 Aethionema arabicum HOM05D006779 ORTHO05D008491 2.6e-69 266.2 250 65.6
Glyma.02G159500 Glycine max HOM05D006779 ORTHO05D008491 2.6e-69 266.2 248 64.1
CAN.G322.16 Capsicum annuum HOM05D006779 ORTHO05D008491 3.4e-69 265.8 252 63.9
Nn5g30192 Nelumbo nucifera HOM05D006779 ORTHO05D008491 4.5e-69 265.4 260 64.6
arahy.Tifrunner.gnm1.ann1.QJKD6Y Arachis hypogaea HOM05D006779 ORTHO05D008491 5.8e-69 265.0 250 65.2
DCAR_029018 Daucus carota HOM05D000144 ORTHO05D003364 1.3e-68 263.8 263 63.9
MSTRG.16763 Avicennia marina HOM05D006779 ORTHO05D008491 1.4e-67 260.4 253 65.6
SalBow6G0615 Salvia bowleyana HOM05D006779 ORTHO05D008491 1.6e-66 256.9 258 62.4
Sp1g36470 Schrenkiella parvula HOM05D006779 ORTHO05D008491 2.7e-66 256.1 250 62.4
Psat7g121840 Pisum sativum HOM05D006779 ORTHO05D008491 7.9e-66 254.6 252 64.3
Thhalv10011741m.g Eutrema salsugineum HOM05D006779 ORTHO05D008491 1.0e-65 254.2 250 62.8
Lj5C207T4 Lonicera japonica HOM05D006779 ORTHO05D008491 1.8e-65 253.4 263 60.1
Peaxi162Scf00016g01637 Petunia axillaris HOM05D006779 ORTHO05D008491 3.9e-65 252.3 248 63.7
unitig_60.g25783 Utricularia gibba HOM05D006779 ORTHO05D008491 5.1e-65 251.9 256 62.1
Ca_18655_v3 Cicer arietinum L. HOM05D006779 ORTHO05D008491 9.7e-64 247.7 248 61.3
EL10Ac3g06870 Beta vulgaris HOM05D006779 ORTHO05D008491 1.3e-63 247.3 250 63.2
AUR62034187 Chenopodium quinoa HOM05D006779 ORTHO05D008491 1.6e-63 246.9 251 62.2
Aqoxy6G01411 Aquilegia oxysepala HOM05D006779 ORTHO05D008491 8.2e-63 244.6 262 59.5
Lj4g0006122 Lotus japonicus HOM05D006779 ORTHO05D008491 2.4e-62 243.0 248 63.3
MBI02_g21199_MAGBIO Magnolia biondii HOM05D006779 ORTHO05D008491 4.1e-62 242.3 273 59.0
PSO541G4058 Papaver somniferum HOM05D006779 ORTHO05D008491 5.3e-62 241.9 263 61.6
A06p03540 Brassica napus HOM05D006779 ORTHO05D008491 2.0e-61 240.0 251 59.8
AT1G49590 Arabidopsis thaliana HOM05D006779 ORTHO05D008491 2.6e-61 239.6 250 60.8
BolC6t35591H Brassica oleracea HOM05D006779 ORTHO05D008491 7.7e-61 238.0 248 59.7
SGA_v2.0_scaffold90G27693 Striga asiatica HOM05D006779 ORTHO05D008491 2.9e-60 236.1 264 54.5
BraA06t23562Z Brassica rapa HOM05D006779 ORTHO05D008491 3.8e-60 235.7 249 59.8
AUR62022456 Chenopodium quinoa HOM05D006779 ORTHO05D008491 1.1e-59 234.2 291 54.6
Hund00325 Selenicereus undatus HOM05D006779 ORTHO05D008491 1.9e-59 233.4 250 61.2
SGA_v2.0_scaffold90G27688 Striga asiatica HOM05D006779 ORTHO05D008491 2.5e-59 233.0 264 54.2
Carub.0001s3879 Capsella rubella HOM05D006779 ORTHO05D008491 5.5e-59 231.9 250 60.0
HanXRQChr10g0303251 Helianthus annuus HOM05D006779 ORTHO05D008491 9.4e-59 231.1 250 59.2
SHI05379 Sapria himalayana HOM05D006779 ORTHO05D008491 9.4e-59 231.1 252 57.9
PSO675G5018 Papaver somniferum HOM05D006779 ORTHO05D008491 3.6e-58 229.2 263 59.7
Ah.04g152710 Amaranthus hybridus HOM05D006779 ORTHO05D008491 6.1e-58 228.4 247 57.9
MELO3C018438.2 Cucumis melo HOM05D006779 ORTHO05D008491 6.1e-58 228.4 206 68.9
HPP92_004257 Vanilla planifolia HOM05D006779 ORTHO05D008491 1.0e-57 227.6 260 57.3
ECA234G4762 Erigeron canadensis HOM05D006779 ORTHO05D008491 1.4e-57 227.3 253 58.1
BcaNung06359 Brassica carinata HOM05D006779 ORTHO05D008491 6.9e-54 214.9 251 55.4
AL1G56960 Arabidopsis lyrata HOM05D006779 ORTHO05D008491 1.7e-52 210.3 268 55.2
Lsat_1_v5_gn_5_113321 Lactuca sativa HOM05D006779 ORTHO05D008491 1.1e-51 207.6 257 50.2
Medtr4g086640 Medicago truncatula HOM05D006779 ORTHO05D008491 4.2e-51 205.7 252 56.3
CDE06G1966 Ceratophyllum demersum HOM05D006779 ORTHO05D008491 2.0e-48 196.8 249 50.6
FAN20G1913 Fragaria x ananassa HOM05D006779 ORTHO05D008491 1.4e-41 174.1 150 72.0
Mapoly0157s0003 Marchantia polymorpha HOM05D006779 ORTHO05D008491 1.4e-41 174.1 299 44.8
C06p04620 Brassica napus HOM05D006779 ORTHO05D008491 1.1e-40 171.0 205 58.0
Zm00001eb373090 Zea mays HOM05D006779 ORTHO05D008491 1.1e-40 171.0 251 51.0
ATR0097G032 Amborella trichopoda HOM05D006779 ORTHO05D008491 1.5e-40 170.6 241 47.3
AagrBONN_evm.TU.Sc2ySwM_344.4302 Anthoceros agrestis HOM05D006779 ORTHO05D008491 1.0e-36 157.9 288 43.8
SMO367G0139 Selaginella moellendorffii HOM05D006779 ORTHO05D008491 5.5e-35 152.1 281 41.3
TAR628G0388 Trochodendron aralioides HOM05D006779 ORTHO05D008491 4.7e-34 149.1 111 68.5
Cpa.g.sc62.36 Carica papaya HOM05D006779 ORTHO05D008491 1.8e-33 147.1 101 74.3
Pp3c14_26080 Physcomitrium patens HOM05D006779 ORTHO05D008491 5.2e-33 145.6 292 41.8
CSS0021002 Camellia sinensis var. sinensis HOM05D006779 ORTHO05D008491 2.2e-28 130.2 191 48.7
CSS0024784 Camellia sinensis var. sinensis HOM05D006779 ORTHO05D008491 2.2e-28 130.2 191 48.2
CBR_g17671 Chara braunii HOM05D006779 ORTHO05D008491 2.9e-28 129.8 338 35.2
CARHR039640 Cardamine hirsuta HOM05D006779 ORTHO05D008491 3.8e-28 129.4 151 62.9
HPP92_004235 Vanilla planifolia HOM05D006779 ORTHO05D008491 3.8e-28 129.4 214 50.9
Os06g0215200 Oryza sativa ssp. japonica HOM05D006779 ORTHO05D008491 2.6e-24 116.7 70 75.7
AUR62042088 Chenopodium quinoa HOM05D006779 ORTHO05D008491 3.4e-24 116.3 203 48.3
TPR.G23511 Trifolium pratense HOM05D006779 ORTHO05D008491 4.4e-24 115.9 70 77.1
TPR.G23531 Trifolium pratense HOM05D006779 ORTHO05D008491 4.1e-22 109.4 151 54.3
CSS0022737 Camellia sinensis var. sinensis HOM05D006779 ORTHO05D008491 3.6e-18 96.3 182 42.3
CDE03G0027 Ceratophyllum demersum HOM05D006779 ORTHO05D008491 1.2e-16 91.3 249 35.7
CSS0005405 Camellia sinensis var. sinensis HOM05D006779 ORTHO05D008491 1.8e-14 84.0 153 42.5
CSS0011003 Camellia sinensis var. sinensis HOM05D006779 ORTHO05D008491 1.8e-14 84.0 153 42.5
TAR628G1516 Trochodendron aralioides HOM05D006779 ORTHO05D008491 1.6e-13 80.9 120 50.0
CSS0034996 Camellia sinensis var. sinensis HOM05D006779 ORTHO05D008491 3.5e-13 79.7 191 38.2
MD10G1090400 Malus domestica HOM05D006779 ORTHO05D008491 2.1e-10 70.5 107 48.6
Ah.08g219340 Amaranthus hybridus HOM05D006779 ORTHO05D008491 2.2e-07 60.5 92 47.8
EL10Ac9g20940 Beta vulgaris HOM05D002686 ORTHO05D003222 9.2e-06 55.1 146 34.2


User provided reference genes

Program Settings