Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra05G0033000 Salix brachista HOM05D005106 ORTHO05D006224 6.5e-125 450.7 218 100.0
Aqoxy1G02310 Aquilegia oxysepala HOM05D005106 ORTHO05D006224 4.7e-14 82.4 41 92.7
Phvul.005G100900 Phaseolus vulgaris HOM05D005106 ORTHO05D006224 6.1e-14 82.0 41 90.2
Actinidia22276 Actinidia chinensis HOM05D005106 ORTHO05D006224 8.0e-14 81.6 41 90.2
arahy.Tifrunner.gnm1.ann1.RWFH5R Arachis hypogaea HOM05D005106 ORTHO05D006224 8.0e-14 81.6 41 90.2
arahy.Tifrunner.gnm1.ann1.UE89WV Arachis hypogaea HOM05D005106 ORTHO05D006224 8.0e-14 81.6 41 90.2
ClCG09G011570 Citrullus lanatus HOM05D005106 ORTHO05D006224 8.0e-14 81.6 41 90.2
COL.COLO4_18047 Corchorus olitorius HOM05D005106 ORTHO05D006224 8.0e-14 81.6 41 90.2
MELO3C026304.2 Cucumis melo HOM05D005106 ORTHO05D006224 8.0e-14 81.6 41 90.2
CsaV3_4G010150 Cucumis sativus L. HOM05D005106 ORTHO05D006224 8.0e-14 81.6 41 90.2
Duzib052G0667 Durio zibethinus HOM05D005106 ORTHO05D006224 8.0e-14 81.6 41 90.2
Duzib132G0012 Durio zibethinus HOM05D005106 ORTHO05D006224 8.0e-14 81.6 41 90.2
Duzib132G0108 Durio zibethinus HOM05D005106 ORTHO05D006224 8.0e-14 81.6 41 90.2
Gohir.A03G154800 Gossypium hirsutum HOM05D005106 ORTHO05D006224 8.0e-14 81.6 41 90.2
Gohir.D02G177800 Gossypium hirsutum HOM05D005106 ORTHO05D006224 8.0e-14 81.6 41 90.2
Gorai.005G199600 Gossypium raimondii HOM05D005106 ORTHO05D006224 8.0e-14 81.6 41 90.2
Medtr2g090655 Medicago truncatula HOM05D005106 ORTHO05D006224 8.0e-14 81.6 41 87.8
Potri.007G137400 Populus trichocarpa HOM05D005106 ORTHO05D006224 8.0e-14 81.6 41 90.2
Sed0010388 Sechium edule HOM05D005106 ORTHO05D006224 8.0e-14 81.6 41 90.2
Thecc.02G185300 Theobroma cacao HOM05D005106 ORTHO05D006224 8.0e-14 81.6 41 90.2
unitig_37.g13100 Utricularia gibba HOM05D005106 ORTHO05D006224 8.0e-14 81.6 41 90.2
GSVIVG01020599001 Vitis vinifera HOM05D005106 ORTHO05D006224 8.0e-14 81.6 41 90.2
TWI23G0861 Tripterygium wilfordii HOM05D005106 ORTHO05D006224 1.0e-13 81.3 41 87.8
MSTRG.25482 Avicennia marina HOM05D005106 ORTHO05D006224 1.4e-13 80.9 41 87.8
Migut.C01328 Erythranthe guttata HOM05D005106 ORTHO05D006224 1.4e-13 80.9 41 87.8
Eucgr.K01050 Eucalyptus grandis HOM05D005106 ORTHO05D006224 1.4e-13 80.9 41 87.8
Lj7A285G44 Lonicera japonica HOM05D005106 ORTHO05D006224 1.4e-13 80.9 41 87.8
Nn1g06427 Nelumbo nucifera HOM05D005106 ORTHO05D006224 1.4e-13 80.9 46 78.3
Nitab4.5_0012603g0010 Nicotiana tabacum HOM05D005106 ORTHO05D006224 1.4e-13 80.9 43 81.4
Solyc02g062620.3 Solanum lycopersicum HOM05D005106 ORTHO05D006224 1.4e-13 80.9 41 87.8
Sopen02g013650 Solanum pennellii HOM05D005106 ORTHO05D006224 1.4e-13 80.9 41 87.8
SGA_v2.0_scaffold118G32565 Striga asiatica HOM05D005106 ORTHO05D006224 1.4e-13 80.9 41 87.8
Actinidia06452 Actinidia chinensis HOM05D005106 ORTHO05D006224 1.8e-13 80.5 41 87.8
CSS0035973 Camellia sinensis var. sinensis HOM05D005106 ORTHO05D006224 1.8e-13 80.5 41 87.8
Cpa.g.sc83.87 Carica papaya HOM05D005106 ORTHO05D006224 1.8e-13 80.5 41 87.8
CiPaw.03G180900 Carya illinoinensis HOM05D005106 ORTHO05D006224 1.8e-13 80.5 41 87.8
ClCG02G009520 Citrullus lanatus HOM05D005106 ORTHO05D006224 1.8e-13 80.5 41 90.2
Dinv21367 Davidia involucrata HOM05D005106 ORTHO05D006224 1.8e-13 80.5 41 87.8
FvH4_6g26630 Fragaria vesca HOM05D005106 ORTHO05D006224 1.8e-13 80.5 41 87.8
FAN05G0301 Fragaria x ananassa HOM05D005106 ORTHO05D006224 1.8e-13 80.5 41 87.8
FAN09G4502 Fragaria x ananassa HOM05D005106 ORTHO05D006224 1.8e-13 80.5 41 87.8
FAN14G3298 Fragaria x ananassa HOM05D005106 ORTHO05D006224 1.8e-13 80.5 41 87.8
Glyma.12G206400 Glycine max HOM05D005106 ORTHO05D006224 1.8e-13 80.5 41 87.8
Lj3g0003979 Lotus japonicus HOM05D005106 ORTHO05D006224 1.8e-13 80.5 41 87.8
Lalb_Chr14g0367111 Lupinus albus HOM05D005106 ORTHO05D006224 1.8e-13 80.5 41 87.8
MD09G1242300 Malus domestica HOM05D005106 ORTHO05D006224 1.8e-13 80.5 41 87.8
MD17G1234600 Malus domestica HOM05D005106 ORTHO05D006224 1.8e-13 80.5 41 87.8
Manes.13G142600 Manihot esculenta HOM05D005106 ORTHO05D006224 1.8e-13 80.5 41 87.8
Nitab4.5_0000061g0200 Nicotiana tabacum HOM05D005106 ORTHO05D006224 1.8e-13 80.5 41 85.4
Nitab4.5_0007033g0060 Nicotiana tabacum HOM05D005106 ORTHO05D006224 1.8e-13 80.5 41 85.4
Nitab4.5_0008100g0020 Nicotiana tabacum HOM05D005106 ORTHO05D006224 1.8e-13 80.5 41 85.4
PSO541G1716 Papaver somniferum HOM05D005106 ORTHO05D006224 1.8e-13 80.5 41 85.4
PSO675G4288 Papaver somniferum HOM05D005106 ORTHO05D006224 1.8e-13 80.5 41 85.4
Peaxi162Scf00688g00358 Petunia axillaris HOM05D005106 ORTHO05D006224 1.8e-13 80.5 41 85.4
Prupe.3G134700 Prunus persica HOM05D005106 ORTHO05D006224 1.8e-13 80.5 41 87.8
PGR142G3950 Punica granatum HOM05D005106 ORTHO05D006224 1.8e-13 80.5 41 87.8
Rhsim05G0079400 Rhododendron simsii HOM05D005106 ORTHO05D006224 1.8e-13 80.5 41 87.8
RcHm_v2.0_Chr2g0127331 Rosa chinensis HOM05D005106 ORTHO05D006224 1.8e-13 80.5 41 87.8
vmacro09002 Vaccinium macrocarpon HOM05D005106 ORTHO05D006224 1.8e-13 80.5 41 87.8
CARHR179060 Cardamine hirsuta HOM05D005106 ORTHO05D006224 2.3e-13 80.1 41 85.4
Ca_01483_v3 Cicer arietinum L. HOM05D005106 ORTHO05D006224 2.3e-13 80.1 41 85.4
Psat5g273600 Pisum sativum HOM05D005106 ORTHO05D006224 2.3e-13 80.1 41 85.4
Potri.017G014600 Populus trichocarpa HOM05D005106 ORTHO05D006224 2.3e-13 80.1 41 87.8
Sc04g0004750 Simmondsia chinensis HOM05D005106 ORTHO05D006224 2.3e-13 80.1 41 87.8
Zm00001eb184540 Zea mays HOM05D005106 ORTHO05D006224 2.3e-13 80.1 41 87.8
Zm00001eb246940 Zea mays HOM05D005106 ORTHO05D006224 2.3e-13 80.1 41 87.8
CANSAT64G0803 Cannabis sativa HOM05D005106 ORTHO05D006224 3.0e-13 79.7 41 85.4
CiPaw.04G128700 Carya illinoinensis HOM05D005106 ORTHO05D006224 3.0e-13 79.7 41 85.4
Ciclev10016365m.g Citrus clementina HOM05D005106 ORTHO05D006224 3.0e-13 79.7 41 87.8
Sabra17G0011800 Salix brachista HOM05D005106 ORTHO05D006224 3.0e-13 79.7 41 87.8
Hund09671 Selenicereus undatus HOM05D005106 ORTHO05D006224 3.0e-13 79.7 41 85.4
TWI59G0090 Tripterygium wilfordii HOM05D005106 ORTHO05D006224 3.0e-13 79.7 41 85.4
Atru.chr6.2876 Acer truncatum HOM05D005106 ORTHO05D006224 4.0e-13 79.3 41 82.9
Ah.11g045690 Amaranthus hybridus HOM05D005106 ORTHO05D006224 4.0e-13 79.3 41 85.4
Cc10_g09490 Coffea canephora HOM05D005106 ORTHO05D006224 4.0e-13 79.3 41 82.9
Lalb_Chr22g0356721 Lupinus albus HOM05D005106 ORTHO05D006224 4.0e-13 79.3 41 87.8
Os02g0612300 Oryza sativa ssp. japonica HOM05D005106 ORTHO05D006224 4.0e-13 79.3 41 87.8
HPP92_007900 Vanilla planifolia HOM05D005106 ORTHO05D006224 4.0e-13 79.3 41 85.4
AUR62010400 Chenopodium quinoa HOM05D005106 ORTHO05D006224 5.2e-13 79.0 41 85.4
AUR62016818 Chenopodium quinoa HOM05D005106 ORTHO05D006224 5.2e-13 79.0 41 85.4
Glyma.13G294500 Glycine max HOM05D005106 ORTHO05D006224 5.2e-13 79.0 41 85.4
TAR627G0282 Trochodendron aralioides HOM05D005106 ORTHO05D006224 5.2e-13 79.0 41 85.4
Aa31LG5G3040 Aethionema arabicum HOM05D005106 ORTHO05D006224 6.7e-13 78.6 41 82.9
BcaC06g31640 Brassica carinata HOM05D005106 ORTHO05D006224 6.7e-13 78.6 41 82.9
BcaC06g34582 Brassica carinata HOM05D005106 ORTHO05D006224 6.7e-13 78.6 41 82.9
A06p47380 Brassica napus HOM05D005106 ORTHO05D006224 6.7e-13 78.6 41 82.9
C07p26890 Brassica napus HOM05D005106 ORTHO05D006224 6.7e-13 78.6 41 82.9
BolC7t43217H Brassica oleracea HOM05D005106 ORTHO05D006224 6.7e-13 78.6 41 82.9
BraA06t27608Z Brassica rapa HOM05D005106 ORTHO05D006224 6.7e-13 78.6 41 82.9
Thhalv10003260m.g Eutrema salsugineum HOM05D005106 ORTHO05D006224 6.7e-13 78.6 41 82.9
Lsat_1_v5_gn_2_108860 Lactuca sativa HOM05D005106 ORTHO05D006224 6.7e-13 78.6 41 82.9
Lsat_1_v5_gn_4_146681 Lactuca sativa HOM05D005106 ORTHO05D006224 6.7e-13 78.6 41 85.4
Nitab4.5_0002677g0020 Nicotiana tabacum HOM05D005106 ORTHO05D006224 6.7e-13 78.6 41 82.9
Sp2g09020 Schrenkiella parvula HOM05D005106 ORTHO05D006224 6.7e-13 78.6 41 82.9
Sc21g0003210 Simmondsia chinensis HOM05D005106 ORTHO05D006224 6.7e-13 78.6 40 87.5
THA.LOC104801162 Tarenaya hassleriana HOM05D005106 ORTHO05D006224 6.7e-13 78.6 41 85.4
DCAR_018109 Daucus carota HOM05D005106 ORTHO05D006224 8.8e-13 78.2 41 82.9
ECA238G0369 Erigeron canadensis HOM05D005106 ORTHO05D006224 8.8e-13 78.2 41 80.5
HanXRQChr07g0195561 Helianthus annuus HOM05D005106 ORTHO05D006224 8.8e-13 78.2 41 80.5
HanXRQChr14g0454171 Helianthus annuus HOM05D005106 ORTHO05D006224 8.8e-13 78.2 41 80.5
Nitab4.5_0000556g0280 Nicotiana tabacum HOM05D005106 ORTHO05D006224 8.8e-13 78.2 41 82.9
AL8G15820 Arabidopsis lyrata HOM05D005106 ORTHO05D006224 1.2e-12 77.8 41 82.9
AT5G44200 Arabidopsis thaliana HOM05D005106 ORTHO05D006224 1.2e-12 77.8 41 82.9
Carub.0008s0432 Capsella rubella HOM05D005106 ORTHO05D006224 1.2e-12 77.8 41 82.9
ATR0665G640 Amborella trichopoda HOM05D005106 ORTHO05D006224 2.0e-12 77.0 40 85.0
EL10Ac7g17400 Beta vulgaris HOM05D005106 ORTHO05D006224 2.0e-12 77.0 41 82.9
EL10As7g23802 Beta vulgaris HOM05D005106 ORTHO05D006224 2.0e-12 77.0 41 82.9
AUR62010422 Chenopodium quinoa HOM05D005106 ORTHO05D006224 2.6e-12 76.6 41 82.9
Pp3c17_11470 Physcomitrium patens HOM05D005106 ORTHO05D006224 2.6e-12 76.6 41 78.0
SEGI_07457 Sequoiadendron giganteum HOM05D005106 ORTHO05D006224 5.7e-12 75.5 41 75.6
AUR62010418 Chenopodium quinoa HOM05D005106 ORTHO05D006224 9.7e-12 74.7 41 80.5
Mapoly0001s0392 Marchantia polymorpha HOM05D005106 ORTHO05D006224 9.7e-12 74.7 40 77.5
SMO339G0037 Selaginella moellendorffii HOM05D005106 ORTHO05D006224 9.7e-12 74.7 41 75.6
TPR.G6465 Trifolium pratense HOM05D005106 ORTHO05D006224 9.7e-12 74.7 40 82.5
EL10Ac3g06463 Beta vulgaris HOM05D005106 ORTHO05D006224 1.3e-11 74.3 41 80.5
CBR_g4062 Chara braunii HOM05D005106 ORTHO05D006224 1.3e-11 74.3 41 73.2
Sc04g0004790 Simmondsia chinensis HOM05D005106 ORTHO05D006224 1.3e-11 74.3 41 82.9
AagrBONN_evm.TU.Sc2ySwM_362.2111 Anthoceros agrestis HOM05D005106 ORTHO05D006224 8.2e-11 71.6 41 70.7
Gohir.A11G293700 Gossypium hirsutum HOM05D005106 ORTHO05D006224 2.2e-08 63.5 41 68.3
PRCOL_00004370 Prasinoderma coloniale HOM05D005106 ORTHO05D006224 1.1e-07 61.2 41 53.7
MCO12G258 Micromonas commoda HOM05D005106 ORTHO05D006224 3.6e-06 56.2 40 52.5


User provided reference genes

Program Settings