Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO367G0139 Selaginella moellendorffii HOM05D006779 ORTHO05D008491 2.9e-122 442.2 271 100.0
Potri.009G105500 Populus trichocarpa HOM05D006779 ORTHO05D008491 1.7e-37 160.6 281 43.1
Sabra09G0080600 Salix brachista HOM05D006779 ORTHO05D008491 2.2e-37 160.2 281 41.3
CiPaw.05G054000 Carya illinoinensis HOM05D006779 ORTHO05D008491 3.5e-35 152.9 284 43.3
Solyc01g108430.3 Solanum lycopersicum HOM05D006779 ORTHO05D008491 3.9e-34 149.4 287 38.7
PGSC0003DMG400025811 Solanum tuberosum HOM05D006779 ORTHO05D008491 6.6e-34 148.7 287 38.3
Mapoly0157s0003 Marchantia polymorpha HOM05D006779 ORTHO05D008491 1.9e-33 147.1 301 41.9
Sopen01g050660 Solanum pennellii HOM05D006779 ORTHO05D008491 2.5e-33 146.7 287 38.0
Dinv23582 Davidia involucrata HOM05D006779 ORTHO05D008491 3.3e-33 146.4 279 40.9
Nitab4.5_0005583g0020 Nicotiana tabacum HOM05D006779 ORTHO05D008491 4.3e-33 146.0 284 40.1
Nitab4.5_0004334g0110 Nicotiana tabacum HOM05D006779 ORTHO05D008491 7.3e-33 145.2 284 39.8
arahy.Tifrunner.gnm1.ann1.T066AP Arachis hypogaea HOM05D006779 ORTHO05D008491 2.1e-32 143.7 280 38.2
SGA_v2.0_scaffold90G27693 Striga asiatica HOM05D006779 ORTHO05D008491 2.1e-32 143.7 279 34.8
HPP92_004257 Vanilla planifolia HOM05D006779 ORTHO05D008491 2.1e-32 143.7 275 42.5
Dinv42131 Davidia involucrata HOM05D006779 ORTHO05D008491 2.8e-32 143.3 277 41.2
Oeu064516.1 Olea europaea HOM05D006779 ORTHO05D008491 6.2e-32 142.1 278 36.7
Haze_01903 Corylus avellana HOM05D006779 ORTHO05D008491 8.1e-32 141.7 283 39.9
CsaV3_7G008730 Cucumis sativus L. HOM05D006779 ORTHO05D008491 8.1e-32 141.7 283 38.9
Manes.15G142500 Manihot esculenta HOM05D006779 ORTHO05D008491 1.1e-31 141.4 273 39.2
DCAR_029018 Daucus carota HOM05D000144 ORTHO05D003364 1.4e-31 141.0 276 43.1
MSTRG.16763 Avicennia marina HOM05D006779 ORTHO05D008491 2.3e-31 140.2 283 38.5
arahy.Tifrunner.gnm1.ann1.8ZG09Z Arachis hypogaea HOM05D006779 ORTHO05D008491 4.0e-31 139.4 280 38.6
Lj5C207T4 Lonicera japonica HOM05D006779 ORTHO05D008491 4.0e-31 139.4 262 42.0
QL11p037315 Quercus lobata HOM05D006779 ORTHO05D008491 4.0e-31 139.4 283 41.0
Aqoxy6G01411 Aquilegia oxysepala HOM05D006779 ORTHO05D008491 5.2e-31 139.0 287 38.7
SGA_v2.0_scaffold90G27688 Striga asiatica HOM05D006779 ORTHO05D008491 5.2e-31 139.0 280 34.3
FvH4_2g06680 Fragaria vesca HOM05D006779 ORTHO05D008491 2.0e-30 137.1 284 38.7
FAN24G0787 Fragaria x ananassa HOM05D006779 ORTHO05D008491 2.0e-30 137.1 284 38.7
GSVIVG01031784001 Vitis vinifera HOM05D006779 ORTHO05D008491 2.6e-30 136.7 282 38.7
FAN15G3147 Fragaria x ananassa HOM05D006779 ORTHO05D008491 3.4e-30 136.3 283 38.2
Migut.B00314 Erythranthe guttata HOM05D006779 ORTHO05D008491 5.8e-30 135.6 279 37.3
PGR142G0644 Punica granatum HOM05D006779 ORTHO05D008491 5.8e-30 135.6 283 39.2
unitig_60.g25783 Utricularia gibba HOM05D006779 ORTHO05D008491 5.8e-30 135.6 274 39.8
FAN20G2937 Fragaria x ananassa HOM05D006779 ORTHO05D008491 7.5e-30 135.2 283 37.8
PSO541G4058 Papaver somniferum HOM05D006779 ORTHO05D008491 7.5e-30 135.2 278 45.3
CAN.G322.16 Capsicum annuum HOM05D006779 ORTHO05D008491 9.9e-30 134.8 286 39.5
Sed0011670 Sechium edule HOM05D006779 ORTHO05D008491 9.9e-30 134.8 283 37.8
TWI79G0004 Tripterygium wilfordii HOM05D006779 ORTHO05D008491 9.9e-30 134.8 281 39.1
Glyma.02G159500 Glycine max HOM05D006779 ORTHO05D008491 1.3e-29 134.4 280 40.0
Atru.chr5.2773 Acer truncatum HOM05D006779 ORTHO05D008491 1.7e-29 134.0 280 40.4
Cc02_g18560 Coffea canephora HOM05D006779 ORTHO05D008491 1.7e-29 134.0 284 37.3
Sc18g0004890 Simmondsia chinensis HOM05D006779 ORTHO05D008491 1.7e-29 134.0 286 40.2
Ciclev10029963m.g Citrus clementina HOM05D006779 ORTHO05D008491 2.2e-29 133.7 283 39.2
Glyma.01G146900 Glycine max HOM05D006779 ORTHO05D008491 3.7e-29 132.9 280 38.9
Glyma.10G112900 Glycine max HOM05D006779 ORTHO05D008491 3.7e-29 132.9 280 38.9
AagrBONN_evm.TU.Sc2ySwM_344.4302 Anthoceros agrestis HOM05D006779 ORTHO05D008491 4.9e-29 132.5 292 37.3
Eucgr.I01169 Eucalyptus grandis HOM05D006779 ORTHO05D008491 4.9e-29 132.5 281 35.2
MBI02_g21199_MAGBIO Magnolia biondii HOM05D006779 ORTHO05D008491 6.4e-29 132.1 285 38.2
Lsat_1_v5_gn_5_113321 Lactuca sativa HOM05D006779 ORTHO05D008491 8.3e-29 131.7 262 36.6
Phvul.007G247000 Phaseolus vulgaris HOM05D006779 ORTHO05D008491 8.3e-29 131.7 273 35.2
CSS0011815 Camellia sinensis var. sinensis HOM05D000591 ORTHO05D000579 1.1e-28 131.3 282 33.3
Thecc.02G097400 Theobroma cacao HOM05D006779 ORTHO05D008491 1.1e-28 131.3 282 37.9
Actinidia00459 Actinidia chinensis HOM05D006779 ORTHO05D008491 1.4e-28 131.0 277 33.9
SalBow6G0615 Salvia bowleyana HOM05D006779 ORTHO05D008491 1.4e-28 131.0 282 38.7
arahy.Tifrunner.gnm1.ann1.QJKD6Y Arachis hypogaea HOM05D006779 ORTHO05D008491 1.9e-28 130.6 280 38.2
RcHm_v2.0_Chr6g0258731 Rosa chinensis HOM05D006779 ORTHO05D008491 2.4e-28 130.2 284 36.6
PSO675G5018 Papaver somniferum HOM05D006779 ORTHO05D008491 3.2e-28 129.8 279 45.2
vmacro02181 Vaccinium macrocarpon HOM05D006779 ORTHO05D008491 4.1e-28 129.4 302 33.8
Nn5g30192 Nelumbo nucifera HOM05D006779 ORTHO05D008491 5.4e-28 129.0 282 38.7
Thhalv10011741m.g Eutrema salsugineum HOM05D006779 ORTHO05D008491 7.1e-28 128.6 272 37.9
Rhsim11G0168500 Rhododendron simsii HOM05D006779 ORTHO05D008491 7.1e-28 128.6 297 33.0
Aa31LG10G4420 Aethionema arabicum HOM05D006779 ORTHO05D008491 9.2e-28 128.3 279 35.8
EL10Ac3g06870 Beta vulgaris HOM05D006779 ORTHO05D008491 9.2e-28 128.3 286 38.1
Sp1g36470 Schrenkiella parvula HOM05D006779 ORTHO05D008491 1.2e-27 127.9 272 37.1
Psat7g121840 Pisum sativum HOM05D006779 ORTHO05D008491 2.1e-27 127.1 282 39.0
AUR62034187 Chenopodium quinoa HOM05D006779 ORTHO05D008491 4.6e-27 125.9 276 39.9
BolC6t35591H Brassica oleracea HOM05D006779 ORTHO05D008491 6.0e-27 125.6 271 36.9
Lalb_Chr09g0328181 Lupinus albus HOM05D006779 ORTHO05D008491 6.0e-27 125.6 273 38.1
A06p03540 Brassica napus HOM05D006779 ORTHO05D008491 7.8e-27 125.2 272 36.8
Prupe.8G119200 Prunus persica HOM05D006779 ORTHO05D008491 7.8e-27 125.2 283 36.4
BraA06t23562Z Brassica rapa HOM05D006779 ORTHO05D008491 1.7e-26 124.0 271 36.9
TWI31G0027 Tripterygium wilfordii HOM05D006779 ORTHO05D008491 1.7e-26 124.0 281 38.4
AT1G49590 Arabidopsis thaliana HOM05D006779 ORTHO05D008491 2.3e-26 123.6 270 39.3
ClCG02G005780 Citrullus lanatus HOM05D006779 ORTHO05D008491 2.3e-26 123.6 309 36.9
HanXRQChr10g0303251 Helianthus annuus HOM05D006779 ORTHO05D008491 2.3e-26 123.6 273 38.5
Lj4g0006122 Lotus japonicus HOM05D006779 ORTHO05D008491 2.3e-26 123.6 277 39.4
Peaxi162Scf00016g01637 Petunia axillaris HOM05D006779 ORTHO05D008491 3.9e-26 122.9 271 37.6
MD05G1075500 Malus domestica HOM05D006779 ORTHO05D008491 8.6e-26 121.7 283 37.8
CANSAT25G0176 Cannabis sativa HOM05D006779 ORTHO05D008491 1.1e-25 121.3 283 36.4
Ah.04g152710 Amaranthus hybridus HOM05D006779 ORTHO05D008491 1.5e-25 120.9 281 33.8
ECA234G4762 Erigeron canadensis HOM05D006779 ORTHO05D008491 1.5e-25 120.9 269 36.1
Gohir.A03G191700 Gossypium hirsutum HOM05D006779 ORTHO05D008491 1.5e-25 120.9 283 38.5
Gorai.005G240600 Gossypium raimondii HOM05D006779 ORTHO05D008491 2.5e-25 120.2 283 36.4
COL.COLO4_32686 Corchorus olitorius HOM05D006779 ORTHO05D008491 4.3e-25 119.4 282 37.9
BcaNung06359 Brassica carinata HOM05D006779 ORTHO05D008491 7.3e-25 118.6 261 36.8
Gohir.D02G212600 Gossypium hirsutum HOM05D006779 ORTHO05D008491 7.3e-25 118.6 283 36.0
Carub.0001s3879 Capsella rubella HOM05D006779 ORTHO05D008491 9.5e-25 118.2 273 38.8
SHI05379 Sapria himalayana HOM05D006779 ORTHO05D008491 9.5e-25 118.2 276 42.0
AL1G56960 Arabidopsis lyrata HOM05D006779 ORTHO05D008491 1.6e-24 117.5 270 39.3
Pp3c14_26080 Physcomitrium patens HOM05D006779 ORTHO05D008491 3.6e-24 116.3 301 35.5
Ca_18655_v3 Cicer arietinum L. HOM05D006779 ORTHO05D008491 4.7e-24 115.9 280 36.1
Hund00325 Selenicereus undatus HOM05D006779 ORTHO05D008491 1.1e-23 114.8 280 38.6
CDE06G1966 Ceratophyllum demersum HOM05D006779 ORTHO05D008491 1.2e-22 111.3 265 32.8
CBR_g17671 Chara braunii HOM05D006779 ORTHO05D008491 3.4e-22 109.8 185 43.2
AUR62022456 Chenopodium quinoa HOM05D006779 ORTHO05D008491 1.7e-21 107.5 283 31.8
TAR628G0388 Trochodendron aralioides HOM05D006779 ORTHO05D008491 1.4e-20 104.4 79 58.2
Medtr4g086640 Medicago truncatula HOM05D006779 ORTHO05D008491 6.0e-19 99.0 276 35.5
ATR0097G032 Amborella trichopoda HOM05D006779 ORTHO05D008491 1.3e-18 97.8 254 31.9
Cpa.g.sc62.36 Carica papaya HOM05D006779 ORTHO05D008491 1.3e-18 97.8 79 55.7
Os06g0215200 Oryza sativa ssp. japonica HOM05D006779 ORTHO05D008491 2.8e-16 90.1 68 55.9
Zm00001eb373090 Zea mays HOM05D006779 ORTHO05D008491 3.6e-16 89.7 277 32.9
TPR.G23511 Trifolium pratense HOM05D006779 ORTHO05D008491 2.6e-14 83.6 68 52.9
MELO3C018438.2 Cucumis melo HOM05D006779 ORTHO05D008491 3.3e-09 66.6 239 32.6
C06p04620 Brassica napus HOM05D006779 ORTHO05D008491 3.6e-08 63.2 228 32.0
HPP92_004235 Vanilla planifolia HOM05D006779 ORTHO05D008491 3.1e-07 60.1 231 35.9
FAN20G1913 Fragaria x ananassa HOM05D006779 ORTHO05D008491 9.0e-07 58.5 165 36.4
CARHR039640 Cardamine hirsuta HOM05D006779 ORTHO05D008491 4.5e-06 56.2 152 39.5


User provided reference genes

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