Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO117G0275 Selaginella moellendorffii HOM05D006371 ORTHO05D008309 3.9e-285 984.2 518 100.0
Mapoly0111s0056 Marchantia polymorpha HOM05D006371 ORTHO05D008309 1.0e-152 544.3 552 55.8
Pp3c4_14910 Physcomitrium patens HOM05D006371 ORTHO05D008309 1.3e-144 517.3 549 53.2
AagrBONN_evm.TU.Sc2ySwM_368.983 Anthoceros agrestis HOM05D006371 ORTHO05D008309 3.7e-134 482.6 507 54.2
Sc07g0001260 Simmondsia chinensis HOM05D006371 ORTHO05D008309 1.7e-131 473.8 550 50.4
Cc07_g11500 Coffea canephora HOM05D006371 ORTHO05D008309 5.0e-131 472.2 569 48.5
Migut.D00896 Erythranthe guttata HOM05D006371 ORTHO05D008309 1.6e-129 467.2 549 48.3
FAN09G0519 Fragaria x ananassa HOM05D006371 ORTHO05D008309 2.1e-129 466.8 556 48.7
GSVIVG01030124001 Vitis vinifera HOM05D006371 ORTHO05D008309 6.1e-129 465.3 504 52.4
FvH4_6g40410 Fragaria vesca HOM05D006371 ORTHO05D008309 7.9e-129 464.9 555 48.6
FAN14G0004 Fragaria x ananassa HOM05D006371 ORTHO05D008309 7.9e-129 464.9 555 48.6
AUR62039632 Chenopodium quinoa HOM05D006371 ORTHO05D008309 1.0e-128 464.5 522 51.1
Ah.02g129050 Amaranthus hybridus HOM05D006371 ORTHO05D008309 1.4e-128 464.2 549 49.0
Duzib133G1082 Durio zibethinus HOM05D006371 ORTHO05D008309 2.3e-128 463.4 557 48.1
FAN05G5438 Fragaria x ananassa HOM05D006371 ORTHO05D008309 2.3e-128 463.4 557 48.7
Ciclev10014166m.g Citrus clementina HOM05D006371 ORTHO05D008309 3.0e-128 463.0 564 47.0
arahy.Tifrunner.gnm1.ann1.BM1T67 Arachis hypogaea HOM05D006371 ORTHO05D008309 3.9e-128 462.6 561 48.3
EL10Ac6g13348 Beta vulgaris HOM05D006371 ORTHO05D008309 3.9e-128 462.6 559 47.0
FAN02G4613 Fragaria x ananassa HOM05D006371 ORTHO05D008309 3.9e-128 462.6 555 48.6
AUR62040011 Chenopodium quinoa HOM05D006371 ORTHO05D008309 6.7e-128 461.8 556 48.7
RcHm_v2.0_Chr2g0155641 Rosa chinensis HOM05D006371 ORTHO05D008309 6.7e-128 461.8 555 48.8
Glyma.14G190200 Glycine max HOM05D006371 ORTHO05D008309 8.8e-128 461.5 558 48.7
arahy.Tifrunner.gnm1.ann1.YIC3VW Arachis hypogaea HOM05D006371 ORTHO05D008309 4.4e-127 459.1 561 48.0
MD09G1130200 Malus domestica HOM05D006371 ORTHO05D008309 4.4e-127 459.1 556 48.2
Glyma.02G223400 Glycine max HOM05D006371 ORTHO05D008309 5.7e-127 458.8 558 48.9
QL04p067039 Quercus lobata HOM05D006371 ORTHO05D008309 1.3e-126 457.6 567 47.1
SalBow7G3887 Salvia bowleyana HOM05D006371 ORTHO05D008309 1.3e-126 457.6 575 47.0
MELO3C024185.2 Cucumis melo HOM05D006371 ORTHO05D008309 1.7e-126 457.2 573 47.5
Prupe.3G194900 Prunus persica HOM05D006371 ORTHO05D008309 1.7e-126 457.2 560 48.4
PGR031G1410 Punica granatum HOM05D006371 ORTHO05D008309 2.2e-126 456.8 575 46.8
Gorai.007G165100 Gossypium raimondii HOM05D006371 ORTHO05D008309 3.7e-126 456.1 561 48.3
Gohir.A11G148000 Gossypium hirsutum HOM05D006371 ORTHO05D008309 4.8e-126 455.7 562 48.6
CAN.G890.8 Capsicum annuum HOM05D006371 ORTHO05D008309 6.3e-126 455.3 527 49.9
Gohir.D11G154800 Gossypium hirsutum HOM05D006371 ORTHO05D008309 6.3e-126 455.3 561 48.0
Sed0018275 Sechium edule HOM05D006371 ORTHO05D008309 8.2e-126 454.9 571 46.9
ECA238G3451 Erigeron canadensis HOM05D006371 ORTHO05D008309 1.1e-125 454.5 528 49.8
Lalb_Chr04g0252451 Lupinus albus HOM05D006371 ORTHO05D008309 1.4e-125 454.1 556 47.7
Ca_05557_v3 Cicer arietinum L. HOM05D006371 ORTHO05D008309 4.1e-125 452.6 558 47.7
CsaV3_2G010080 Cucumis sativus L. HOM05D006371 ORTHO05D008309 4.1e-125 452.6 568 46.5
Duzib211G0069 Durio zibethinus HOM05D006371 ORTHO05D008309 4.1e-125 452.6 565 48.0
LjContig00155g0006571 Lotus japonicus HOM05D006371 ORTHO05D008309 4.1e-125 452.6 562 47.3
TAR627G0565 Trochodendron aralioides HOM05D006371 ORTHO05D008309 4.1e-125 452.6 575 46.6
Actinidia02362 Actinidia chinensis HOM05D006371 ORTHO05D008309 5.3e-125 452.2 549 47.0
Cfa014202 Carpinus fangiana HOM05D006371 ORTHO05D008309 9.1e-125 451.4 568 46.7
ECA232G0409 Erigeron canadensis HOM05D006371 ORTHO05D008309 1.6e-124 450.7 557 46.0
CiPaw.03G283700 Carya illinoinensis HOM05D006371 ORTHO05D008309 2.6e-124 449.9 572 46.0
PSO541G0072 Papaver somniferum HOM05D006371 ORTHO05D008309 3.5e-124 449.5 587 46.3
TWI36G0955 Tripterygium wilfordii HOM05D006371 ORTHO05D008309 3.5e-124 449.5 579 47.2
CARHR102110 Cardamine hirsuta HOM05D006371 ORTHO05D008309 4.5e-124 449.1 550 47.1
Lsat_1_v5_gn_4_142580 Lactuca sativa HOM05D006371 ORTHO05D008309 4.5e-124 449.1 543 47.7
Nn1g07560 Nelumbo nucifera HOM05D006371 ORTHO05D008309 4.5e-124 449.1 589 45.7
CANSAT64G2089 Cannabis sativa HOM05D006371 ORTHO05D008309 5.9e-124 448.7 603 45.1
HanXRQChr09g0256951 Helianthus annuus HOM05D006371 ORTHO05D008309 7.7e-124 448.4 561 46.3
CSS0032100 Camellia sinensis var. sinensis HOM05D006371 ORTHO05D008309 2.2e-123 446.8 574 46.3
BcaB06g26772 Brassica carinata HOM05D006371 ORTHO05D008309 2.9e-123 446.4 562 46.6
Dinv40160 Davidia involucrata HOM05D006371 ORTHO05D008309 2.9e-123 446.4 572 45.8
Manes.12G064500 Manihot esculenta HOM05D006371 ORTHO05D008309 2.9e-123 446.4 571 45.7
PSO675G4792 Papaver somniferum HOM05D006371 ORTHO05D008309 5.0e-123 445.7 583 45.6
MSTRG.10896 Avicennia marina HOM05D006371 ORTHO05D008309 8.5e-123 444.9 554 47.1
BcaC06g35860 Brassica carinata HOM05D006371 ORTHO05D008309 8.5e-123 444.9 561 46.2
Lj4C228G6 Lonicera japonica HOM05D006371 ORTHO05D008309 8.5e-123 444.9 569 47.3
ATR0751G221 Amborella trichopoda HOM05D006371 ORTHO05D008309 1.1e-122 444.5 603 44.8
Aqoxy3G02224 Aquilegia oxysepala HOM05D006371 ORTHO05D008309 2.5e-122 443.4 582 46.4
Solyc02g083140.3 Solanum lycopersicum HOM05D006371 ORTHO05D008309 2.5e-122 443.4 554 47.8
PGSC0003DMG400001545 Solanum tuberosum HOM05D006371 ORTHO05D008309 3.2e-122 443.0 554 47.1
AT2G04270 Arabidopsis thaliana HOM05D006371 ORTHO05D008309 5.5e-122 442.2 554 46.6
A07p06760 Brassica napus HOM05D006371 ORTHO05D008309 7.2e-122 441.8 553 46.5
Dinv08538 Davidia involucrata HOM05D006371 ORTHO05D008309 7.2e-122 441.8 573 45.2
Aa31sc575G10 Aethionema arabicum HOM05D006371 ORTHO05D008309 9.4e-122 441.4 568 45.1
Psat2g060760 Pisum sativum HOM05D006371 ORTHO05D008309 9.4e-122 441.4 558 46.2
Sp3g23150 Schrenkiella parvula HOM05D006371 ORTHO05D008309 1.2e-121 441.0 565 46.4
Eucgr.A01367 Eucalyptus grandis HOM05D006371 ORTHO05D008309 1.6e-121 440.7 573 45.4
Sopen02g027900 Solanum pennellii HOM05D006371 ORTHO05D008309 1.6e-121 440.7 554 47.1
C07p10340 Brassica napus HOM05D006371 ORTHO05D008309 2.1e-121 440.3 562 46.1
BolC7t41483H Brassica oleracea HOM05D006371 ORTHO05D008309 2.1e-121 440.3 562 46.1
BraA07t28469Z Brassica rapa HOM05D006371 ORTHO05D008309 2.1e-121 440.3 562 46.1
AL3G41970 Arabidopsis lyrata HOM05D006371 ORTHO05D008309 2.7e-121 439.9 554 46.0
Carub.0003s2599 Capsella rubella HOM05D006371 ORTHO05D008309 4.7e-121 439.1 550 46.4
Thhalv10002385m.g Eutrema salsugineum HOM05D006371 ORTHO05D008309 8.0e-121 438.3 564 45.9
THA.LOC104808834 Tarenaya hassleriana HOM05D006371 ORTHO05D008309 8.0e-121 438.3 577 45.9
Zm00001eb038720 Zea mays HOM05D006371 ORTHO05D008309 1.0e-120 438.0 548 46.4
TPR.G13852 Trifolium pratense HOM05D006371 ORTHO05D008309 6.7e-120 435.3 564 46.8
Sabra14G0129800 Salix brachista HOM05D006371 ORTHO05D008309 1.2e-119 434.5 571 45.4
Potri.014G170300 Populus trichocarpa HOM05D006371 ORTHO05D008309 2.6e-119 433.3 571 44.7
Os08g0323600 Oryza sativa ssp. japonica HOM05D006371 ORTHO05D008309 9.7e-119 431.4 565 44.8
HPP92_003032 Vanilla planifolia HOM05D006371 ORTHO05D008309 9.1e-117 424.9 568 44.5
COL.COLO4_19652 Corchorus olitorius HOM05D006371 ORTHO05D008309 2.5e-114 416.8 559 44.9
unitig_748.g7080 Utricularia gibba HOM05D006371 ORTHO05D005825 4.2e-114 416.0 503 47.7
Peaxi162Scf00300g00515 Petunia axillaris HOM05D006371 ORTHO05D008309 4.7e-113 412.5 630 42.5
Thecc.01G199300 Theobroma cacao HOM05D006371 ORTHO05D008309 5.2e-112 409.1 522 47.7
Hund03659 Selenicereus undatus HOM05D006371 ORTHO05D008309 7.5e-111 405.2 569 43.9
SGA_v2.0_scaffold68G22808 Striga asiatica HOM05D006371 ORTHO05D008309 9.8e-111 404.8 581 43.0
Nitab4.5_0005413g0050 Nicotiana tabacum HOM05D006371 ORTHO05D008309 2.8e-110 403.3 559 43.8
Cpa.g.sc136.51 Carica papaya HOM05D006371 ORTHO05D008309 1.8e-109 400.6 395 56.2
Medtr5g069430 Medicago truncatula HOM05D006371 ORTHO05D008309 5.4e-109 399.1 524 45.2
Phvul.008G190000 Phaseolus vulgaris HOM05D006371 ORTHO05D008309 3.1e-101 373.2 469 46.7
ClCG02G003000 Citrullus lanatus HOM05D006371 ORTHO05D008309 9.2e-101 371.7 491 46.4
Oeu049652.2 Olea europaea HOM05D006371 ORTHO05D008309 3.6e-97 359.8 643 39.0
Hund03661 Selenicereus undatus HOM05D006371 ORTHO05D008309 3.0e-96 356.7 591 39.9
MBI15_g38530_MAGBIO Magnolia biondii HOM05D006371 ORTHO05D008309 2.6e-95 353.6 500 44.4
vmacro20507 Vaccinium macrocarpon HOM05D006371 ORTHO05D008309 2.2e-94 350.5 486 45.5
Hma1.2p1_0315F.1_g122770 Hydrangea macrophylla HOM05D006371 ORTHO05D008309 5.6e-90 335.9 445 46.5
DCAR_023137 Daucus carota HOM05D006371 ORTHO05D008309 2.6e-87 327.0 467 44.5
Nitab4.5_0023804g0010 Nicotiana tabacum HOM05D006371 ORTHO05D008309 9.8e-87 325.1 462 43.3
CDE02G2282 Ceratophyllum demersum HOM05D006371 ORTHO05D008309 1.9e-85 320.9 481 41.6
Rhsim10G0203500 Rhododendron simsii HOM05D006371 ORTHO05D008309 1.7e-75 287.7 617 35.0
Atru.chr6.3429 Acer truncatum HOM05D006371 ORTHO05D008309 4.6e-68 263.1 414 40.8
Ca_28887_v3 Cicer arietinum L. HOM05D006371 ORTHO05D008309 6.9e-56 222.6 449 33.0
Haze_12588 Corylus avellana HOM05D006371 ORTHO05D008309 9.0e-56 222.2 380 38.2
SEGI_21719 Sequoiadendron giganteum HOM05D006371 ORTHO05D008309 2.9e-54 217.2 218 54.1
MCO12G287 Micromonas commoda HOM05D006371 ORTHO05D008309 1.1e-42 178.7 316 36.1
Haze_12589 Corylus avellana HOM05D006371 ORTHO05D008309 1.9e-37 161.4 209 46.4
AUR62026198 Chenopodium quinoa HOM05D006371 ORTHO05D008309 2.1e-28 131.3 222 40.5
MD17G1105600 Malus domestica HOM05D006371 ORTHO05D008309 1.4e-27 128.6 197 42.1
CBR_g28919 Chara braunii HOM05D006371 ORTHO05D000048 2.4e-24 117.9 123 51.2
SMO117G0073 Selaginella moellendorffii HOM05D049927 ORTHO05D376019 4.4e-18 97.1 347 31.4
CBR_g28910 Chara braunii HOM05D000019 ORTHO05D000048 1.2e-15 89.0 114 43.9
SMO114G0038 Selaginella moellendorffii HOM05D049927 ORTHO05D375387 3.8e-14 84.0 86 58.1
CBR_g28922 Chara braunii HOM05D000019 ORTHO05D000048 8.5e-14 82.8 241 29.0
SEGI_30134 Sequoiadendron giganteum HOM05D006371 ORTHO05D008309 1.4e-13 82.0 112 42.9
SEGI_19700 Sequoiadendron giganteum HOM05D006371 ORTHO05D008309 5.5e-13 80.1 78 47.4
AUR62026199 Chenopodium quinoa HOM05D000691 ORTHO05D000378 1.1e-08 65.9 60 55.0


User provided reference genes

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