Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO111G0113 Selaginella moellendorffii HOM05D003161 ORTHO05D013615 8.8e-229 796.6 394 100.0
SMO111G0027 Selaginella moellendorffii HOM05D003161 ORTHO05D013615 1.0e-176 623.6 416 79.6
SMO111G0226 Selaginella moellendorffii HOM05D003161 ORTHO05D013615 3.0e-168 595.5 423 76.1
SMO083G0010 Selaginella moellendorffii HOM05D003161 ORTHO05D013615 9.5e-167 590.5 438 74.9
SMO111G0203 Selaginella moellendorffii HOM05D001088 ORTHO05D013615 3.6e-150 535.4 443 66.4
SMO111G0064 Selaginella moellendorffii HOM05D003161 ORTHO05D013615 5.8e-148 528.1 411 71.5
SMO111G0153 Selaginella moellendorffii HOM05D003161 ORTHO05D013615 3.9e-128 462.2 353 71.4
SMO083G0001 Selaginella moellendorffii HOM05D003161 ORTHO05D013615 2.8e-126 456.1 380 67.9
SMO160G0005 Selaginella moellendorffii HOM05D003161 ORTHO05D013615 6.3e-126 454.9 432 61.6
SMO140G0090 Selaginella moellendorffii HOM05D003161 ORTHO05D013615 1.1e-125 454.1 275 86.2
SMO215G0003 Selaginella moellendorffii HOM05D003161 ORTHO05D013615 2.2e-123 446.4 404 64.6
SMO137G0021 Selaginella moellendorffii HOM05D003161 ORTHO05D005173 1.1e-111 407.5 472 53.0
SMO200G0255 Selaginella moellendorffii HOM05D003161 ORTHO05D013615 1.9e-98 363.6 243 78.2
SMO111G0100 Selaginella moellendorffii HOM05D003161 ORTHO05D013615 2.0e-79 300.4 312 58.0
SMO140G0066 Selaginella moellendorffii HOM05D003161 ORTHO05D013615 1.8e-77 293.9 308 57.5
SMO140G0012 Selaginella moellendorffii HOM05D003161 ORTHO05D013615 6.8e-56 222.2 194 64.4
SMO140G0060 Selaginella moellendorffii HOM05D003161 ORTHO05D013615 3.0e-51 206.8 153 71.9
Mapoly0019s0051 Marchantia polymorpha HOM05D003161 ORTHO05D005173 6.0e-44 182.6 466 31.8
AagrBONN_evm.TU.Sc2ySwM_340.243 Anthoceros agrestis HOM05D003161 ORTHO05D005173 2.4e-40 170.6 427 29.3
GSVIVG01033430001 Vitis vinifera HOM05D003161 ORTHO05D005173 9.9e-39 165.2 444 30.6
HanXRQChr14g0457761 Helianthus annuus HOM05D003161 ORTHO05D005173 2.2e-38 164.1 425 29.9
Pp3c4_30330 Physcomitrium patens HOM05D003161 ORTHO05D005173 4.9e-38 162.9 462 29.0
Lalb_Chr21g0316111 Lupinus albus HOM05D003161 ORTHO05D005173 2.4e-37 160.6 483 27.5
Lsat_1_v5_gn_2_58000 Lactuca sativa HOM05D003161 ORTHO05D005173 1.2e-36 158.3 423 31.4
Rhsim04G0093500 Rhododendron simsii HOM05D003161 ORTHO05D005173 1.2e-36 158.3 460 28.0
Eucgr.A02507 Eucalyptus grandis HOM05D003161 ORTHO05D005173 2.1e-36 157.5 472 28.6
CANSAT64G2741 Cannabis sativa HOM05D003161 ORTHO05D005173 2.7e-36 157.1 462 29.7
AUR62041563 Chenopodium quinoa HOM05D003161 ORTHO05D005173 6.0e-36 156.0 445 27.2
Ciclev10013867m.g Citrus clementina HOM05D003161 ORTHO05D005173 1.7e-35 154.5 475 28.4
Ah.15g091410 Amaranthus hybridus HOM05D003161 ORTHO05D005173 3.0e-35 153.7 452 27.4
vmacro09128 Vaccinium macrocarpon HOM05D003161 ORTHO05D005173 3.0e-35 153.7 466 27.0
Hund19218 Selenicereus undatus HOM05D003161 ORTHO05D005173 5.1e-35 152.9 421 29.7
VMungo0720G1738 Vigna mungo HOM05D003161 ORTHO05D005173 1.1e-34 151.8 463 27.0
Lj5g0006535 Lotus japonicus HOM05D003161 ORTHO05D005173 1.9e-34 151.0 467 27.6
Glyma.09G104000 Glycine max HOM05D003161 ORTHO05D005173 2.5e-34 150.6 464 27.8
AUR62026957 Chenopodium quinoa HOM05D003161 ORTHO05D005173 4.3e-34 149.8 446 26.2
ECA238G1915 Erigeron canadensis HOM05D003161 ORTHO05D005173 4.3e-34 149.8 426 29.8
Gorai.006G145100 Gossypium raimondii HOM05D003161 ORTHO05D005173 4.3e-34 149.8 479 26.5
Gohir.A09G130300 Gossypium hirsutum HOM05D003161 ORTHO05D005173 5.6e-34 149.4 476 27.3
EL10Ac7g16694 Beta vulgaris HOM05D003161 ORTHO05D005173 1.6e-33 147.9 476 26.1
CiPaw.08G134900 Carya illinoinensis HOM05D003161 ORTHO05D005173 2.1e-33 147.5 446 28.0
Hund19220 Selenicereus undatus HOM05D003161 ORTHO05D005173 3.6e-33 146.7 450 29.3
Aqoxy2G02393 Aquilegia oxysepala HOM05D003161 ORTHO05D005173 4.8e-33 146.4 433 27.0
Dinv25021 Davidia involucrata HOM05D003161 ORTHO05D005173 4.8e-33 146.4 449 27.6
QL07p025530 Quercus lobata HOM05D003161 ORTHO05D005173 4.8e-33 146.4 455 27.7
Glyma.02G168900 Glycine max HOM05D003161 ORTHO05D005173 6.2e-33 146.0 464 27.8
Gohir.D09G126300 Gossypium hirsutum HOM05D003161 ORTHO05D005173 8.1e-33 145.6 468 26.3
Peaxi162Scf00045g00223 Petunia axillaris HOM05D003161 ORTHO05D005173 8.1e-33 145.6 449 27.2
SGA_v2.0_scaffold274G46506 Striga asiatica HOM05D003161 ORTHO05D005173 8.1e-33 145.6 444 26.8
Sc19g0006250 Simmondsia chinensis HOM05D003161 ORTHO05D005173 1.1e-32 145.2 477 28.3
Nitab4.5_0000571g0110 Nicotiana tabacum HOM05D003161 ORTHO05D005173 4.0e-32 143.3 480 26.9
TPR.G14502 Trifolium pratense HOM05D003161 ORTHO05D005173 5.3e-32 142.9 465 28.2
Psat6g109960 Pisum sativum HOM05D003161 ORTHO05D005173 6.9e-32 142.5 467 27.6
Actinidia38605 Actinidia chinensis HOM05D003161 ORTHO05D005173 1.2e-31 141.7 453 25.8
TAR633G1132 Trochodendron aralioides HOM05D003161 ORTHO05D005173 1.2e-31 141.7 462 26.0
CAN.G479.45 Capsicum annuum HOM05D003161 ORTHO05D005173 1.5e-31 141.4 457 27.4
Thecc.05G180200 Theobroma cacao HOM05D003161 ORTHO05D005173 2.0e-31 141.0 459 25.3
Ca_25942_v3 Cicer arietinum L. HOM05D003161 ORTHO05D005173 2.6e-31 140.6 516 27.7
Atru.chr8.1220 Acer truncatum HOM05D003161 ORTHO05D005173 4.5e-31 139.8 450 25.3
Sopen03g011350 Solanum pennellii HOM05D003161 ORTHO05D005173 4.5e-31 139.8 470 27.0
MSTRG.26730 Avicennia marina HOM05D003161 ORTHO05D005173 5.8e-31 139.4 445 25.6
Medtr1g054710 Medicago truncatula HOM05D003161 ORTHO05D005173 5.8e-31 139.4 463 27.6
Prupe.7G085700 Prunus persica HOM05D003161 ORTHO05D005173 5.8e-31 139.4 453 26.3
Sed0016761 Sechium edule HOM05D003161 ORTHO05D005173 5.8e-31 139.4 508 26.6
Zm00001eb302830 Zea mays HOM05D003161 ORTHO05D005173 5.8e-31 139.4 457 26.7
Lj2C361G9 Lonicera japonica HOM05D003161 ORTHO05D005173 7.6e-31 139.0 465 25.8
CAN.G317.9 Capsicum annuum HOM05D003161 ORTHO05D005173 9.9e-31 138.7 451 27.7
Solyc03g051900.4 Solanum lycopersicum HOM05D003161 ORTHO05D005173 9.9e-31 138.7 470 26.8
Duzib128G1871 Durio zibethinus HOM05D003161 ORTHO05D005173 1.3e-30 138.3 463 24.8
Cpa.g.sc85.20 Carica papaya HOM05D003161 ORTHO05D005173 2.2e-30 137.5 482 27.2
arahy.Tifrunner.gnm1.ann1.PL5CUR Arachis hypogaea HOM05D003161 ORTHO05D005173 2.9e-30 137.1 448 26.8
CsaV3_4G031200 Cucumis sativus L. HOM05D003161 ORTHO05D005173 3.8e-30 136.7 446 27.8
CSS0043330 Camellia sinensis var. sinensis HOM05D003161 ORTHO05D005173 4.9e-30 136.3 436 25.2
Migut.K00013 Erythranthe guttata HOM05D003161 ORTHO05D005173 4.9e-30 136.3 469 25.8
MD12G1051100 Malus domestica HOM05D003161 ORTHO05D005173 4.9e-30 136.3 463 28.1
CSS0010787 Camellia sinensis var. sinensis HOM05D003161 ORTHO05D005173 6.4e-30 136.0 452 24.8
TWI53G1521 Tripterygium wilfordii HOM05D003161 ORTHO05D005173 6.4e-30 136.0 448 25.9
DCAR_016871 Daucus carota HOM05D003161 ORTHO05D005173 8.4e-30 135.6 485 24.7
Cfa020115 Carpinus fangiana HOM05D003161 ORTHO05D005173 1.4e-29 134.8 453 27.8
Nitab4.5_0001364g0070 Nicotiana tabacum HOM05D003161 ORTHO05D005173 1.9e-29 134.4 427 27.4
FAN09G2861 Fragaria x ananassa HOM05D003161 ORTHO05D005173 2.4e-29 134.0 469 27.1
Manes.09G040300 Manihot esculenta HOM05D003161 ORTHO05D005173 2.4e-29 134.0 467 26.1
RcHm_v2.0_Chr3g0478661 Rosa chinensis HOM05D003161 ORTHO05D005173 2.4e-29 134.0 462 26.2
FAN02G0008 Fragaria x ananassa HOM05D003161 ORTHO05D005173 4.2e-29 133.3 460 25.9
Oeu046733.1 Olea europaea HOM05D003161 ORTHO05D005173 4.2e-29 133.3 452 25.2
arahy.Tifrunner.gnm1.ann1.S31791 Arachis hypogaea HOM05D003161 ORTHO05D005173 7.1e-29 132.5 392 27.8
FvH4_6g21470 Fragaria vesca HOM05D003161 ORTHO05D005173 1.6e-28 131.3 460 25.9
FAN05G0820 Fragaria x ananassa HOM05D003161 ORTHO05D005173 2.1e-28 131.0 469 25.6
FAN14G4107 Fragaria x ananassa HOM05D003161 ORTHO05D005173 2.1e-28 131.0 460 25.7
CDE02G2929 Ceratophyllum demersum HOM05D003161 ORTHO05D005173 2.7e-28 130.6 454 26.0
FAN05G2723 Fragaria x ananassa HOM05D003161 ORTHO05D005173 2.7e-28 130.6 469 25.6
ATR0737G016 Amborella trichopoda HOM05D003161 ORTHO05D005173 4.6e-28 129.8 438 25.8
BcaC09g48184 Brassica carinata HOM05D003161 ORTHO05D005173 4.6e-28 129.8 472 25.0
CARHR086520 Cardamine hirsuta HOM05D003161 ORTHO05D005173 4.6e-28 129.8 494 24.3
Cc06_g23250 Coffea canephora HOM05D003161 ORTHO05D005173 4.6e-28 129.8 455 25.3
MELO3C008994.2 Cucumis melo HOM05D003161 ORTHO05D005173 4.6e-28 129.8 446 26.5
BolC1t05277H Brassica oleracea HOM05D003161 ORTHO05D005173 6.0e-28 129.4 477 24.9
Aa31sc238G10 Aethionema arabicum HOM05D003161 ORTHO05D005173 1.0e-27 128.6 490 25.9
Haze_20072 Corylus avellana HOM05D003161 ORTHO05D005173 1.0e-27 128.6 367 26.7
Potri.016G062600 Populus trichocarpa HOM05D003161 ORTHO05D005173 1.0e-27 128.6 463 27.4
SalBow1G2678 Salvia bowleyana HOM05D003161 ORTHO05D005173 1.8e-27 127.9 377 29.2
AT3G11964 Arabidopsis thaliana HOM05D003161 ORTHO05D005173 2.3e-27 127.5 498 26.5
THA.LOC104826779 Tarenaya hassleriana HOM05D003161 ORTHO05D005173 3.0e-27 127.1 463 25.3
PSO339G0479 Papaver somniferum HOM05D003161 ORTHO05D005173 3.9e-27 126.7 422 26.3
AL3G23570 Arabidopsis lyrata HOM05D003161 ORTHO05D005173 6.7e-27 125.9 487 24.4
BraA05t22538Z Brassica rapa HOM05D003161 ORTHO05D005173 2.5e-26 124.0 496 25.0
PGR004G2129 Punica granatum HOM05D003161 ORTHO05D005173 2.5e-26 124.0 462 24.2
BcaB04g21101 Brassica carinata HOM05D003161 ORTHO05D005173 3.3e-26 123.6 477 25.2
Phvul.007G270000 Phaseolus vulgaris HOM05D003161 ORTHO05D005173 3.3e-26 123.6 441 25.4
C05p55950 Brassica napus HOM05D003161 ORTHO05D005173 4.3e-26 123.2 487 24.4
BolC5t34262H Brassica oleracea HOM05D003161 ORTHO05D005173 4.3e-26 123.2 487 24.4
ClCG04G001230 Citrullus lanatus HOM05D003161 ORTHO05D005173 4.3e-26 123.2 503 24.1
SEGI_01045 Sequoiadendron giganteum HOM05D003161 ORTHO05D005173 4.3e-26 123.2 416 25.5
PGSC0003DMG400008644 Solanum tuberosum HOM05D003161 ORTHO05D005173 4.3e-26 123.2 367 27.2
BraA01t04149Z Brassica rapa HOM05D003161 ORTHO05D005173 5.6e-26 122.9 497 23.9
Sp3g10190 Schrenkiella parvula HOM05D003161 ORTHO05D005173 9.6e-26 122.1 474 24.7
PSO384G1659 Papaver somniferum HOM05D003161 ORTHO05D005173 6.2e-25 119.4 453 25.4
Thhalv10019877m.g Eutrema salsugineum HOM05D003161 ORTHO05D005173 8.1e-25 119.0 194 36.1
Carub.0003s1130 Capsella rubella HOM05D003161 ORTHO05D005173 1.1e-24 118.6 492 24.4
CAN.G1433.27 Capsicum annuum HOM05D003161 ORTHO05D005173 1.4e-24 118.2 138 42.8
A05p37390 Brassica napus HOM05D003161 ORTHO05D005173 2.4e-24 117.5 494 23.7
Os07g0203300 Oryza sativa ssp. japonica HOM05D003161 ORTHO05D005173 1.5e-23 114.8 190 36.8
BcaC05g29306 Brassica carinata HOM05D003161 ORTHO05D005173 2.0e-23 114.4 474 24.7
HanXRQChr13g0419181 Helianthus annuus HOM05D003161 ORTHO05D009435 7.6e-23 112.5 129 46.5
SHI30029 Sapria himalayana HOM05D003161 ORTHO05D005173 4.9e-22 109.8 444 25.0
COL.COLO4_29434 Corchorus olitorius HOM05D003161 ORTHO05D005173 1.4e-21 108.2 344 25.3
Sabra16G0064600 Salix brachista HOM05D003161 ORTHO05D005173 1.4e-21 108.2 181 35.9
unitig_744.g24086 Utricularia gibba HOM05D003161 ORTHO05D005173 1.4e-21 108.2 390 29.2
MD14G1049800 Malus domestica HOM05D003161 ORTHO05D005173 2.3e-19 100.9 220 30.5
Hund18982 Selenicereus undatus HOM05D003161 ORTHO05D005173 1.1e-18 98.6 302 27.5
Aa31LG3G5540 Aethionema arabicum HOM05D003161 ORTHO05D005173 1.6e-17 94.7 390 25.1
Cfa023914 Carpinus fangiana HOM05D003161 ORTHO05D005173 2.0e-15 87.8 341 26.1
Cre10.g428750 Chlamydomonas reinhardtii HOM05D003161 ORTHO05D005173 4.9e-14 83.2 161 32.9
HPP92_027318 Vanilla planifolia HOM05D003161 ORTHO05D005173 4.9e-14 83.2 152 35.5
CAN.G2759.1 Capsicum annuum HOM05D003161 ORTHO05D005173 1.2e-12 78.6 71 45.1
PRCOL_00005658 Prasinoderma coloniale HOM05D003161 ORTHO05D005173 7.4e-10 69.3 72 44.4
Lsat_1_v5_gn_5_134021 Lactuca sativa HOM05D003161 ORTHO05D005173 2.2e-06 57.8 47 51.1
HPP92_027317 Vanilla planifolia HOM05D003161 ORTHO05D005173 2.2e-06 57.8 247 23.5


User provided reference genes

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