Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO111G0027 Selaginella moellendorffii HOM05D003161 ORTHO05D013615 7.5e-250 866.7 430 100.0
SMO111G0226 Selaginella moellendorffii HOM05D003161 ORTHO05D013615 2.2e-193 679.1 447 81.0
SMO111G0113 Selaginella moellendorffii HOM05D003161 ORTHO05D013615 3.2e-176 622.1 416 79.6
SMO083G0010 Selaginella moellendorffii HOM05D003161 ORTHO05D013615 5.3e-171 604.7 444 74.8
SMO111G0064 Selaginella moellendorffii HOM05D003161 ORTHO05D013615 2.0e-157 559.7 410 74.9
SMO083G0001 Selaginella moellendorffii HOM05D003161 ORTHO05D013615 4.2e-152 542.0 405 73.8
SMO111G0153 Selaginella moellendorffii HOM05D003161 ORTHO05D013615 5.5e-152 541.6 341 82.7
SMO111G0203 Selaginella moellendorffii HOM05D001088 ORTHO05D013615 3.0e-150 535.8 459 64.7
SMO140G0090 Selaginella moellendorffii HOM05D003161 ORTHO05D013615 1.3e-145 520.4 405 70.6
SMO137G0021 Selaginella moellendorffii HOM05D003161 ORTHO05D005173 4.0e-134 482.3 544 53.5
SMO160G0005 Selaginella moellendorffii HOM05D003161 ORTHO05D013615 1.7e-132 476.9 431 63.8
SMO215G0003 Selaginella moellendorffii HOM05D003161 ORTHO05D013615 7.5e-125 451.4 411 64.7
SMO111G0100 Selaginella moellendorffii HOM05D003161 ORTHO05D013615 6.8e-118 428.3 343 69.7
SMO200G0255 Selaginella moellendorffii HOM05D003161 ORTHO05D013615 1.1e-104 384.4 259 78.4
SMO140G0066 Selaginella moellendorffii HOM05D003161 ORTHO05D013615 1.6e-98 364.0 319 65.2
SMO140G0060 Selaginella moellendorffii HOM05D003161 ORTHO05D013615 4.3e-72 276.2 181 81.2
SMO140G0012 Selaginella moellendorffii HOM05D003161 ORTHO05D013615 1.3e-63 248.1 210 65.7
Mapoly0019s0051 Marchantia polymorpha HOM05D003161 ORTHO05D005173 1.7e-52 211.1 594 29.1
AagrBONN_evm.TU.Sc2ySwM_340.243 Anthoceros agrestis HOM05D003161 ORTHO05D005173 1.2e-48 198.4 438 30.6
Pp3c4_30330 Physcomitrium patens HOM05D003161 ORTHO05D005173 2.6e-48 197.2 469 29.6
GSVIVG01033430001 Vitis vinifera HOM05D003161 ORTHO05D005173 1.3e-47 194.9 539 29.7
Lalb_Chr21g0316111 Lupinus albus HOM05D003161 ORTHO05D005173 1.7e-47 194.5 567 27.0
Glyma.09G104000 Glycine max HOM05D003161 ORTHO05D005173 2.2e-47 194.1 569 27.8
VMungo0720G1738 Vigna mungo HOM05D003161 ORTHO05D005173 5.4e-46 189.5 575 26.6
Ciclev10013867m.g Citrus clementina HOM05D003161 ORTHO05D005173 7.0e-46 189.1 575 28.3
HanXRQChr14g0457761 Helianthus annuus HOM05D003161 ORTHO05D005173 1.2e-45 188.3 544 28.9
Lsat_1_v5_gn_2_58000 Lactuca sativa HOM05D003161 ORTHO05D005173 1.2e-45 188.3 547 28.2
TPR.G14502 Trifolium pratense HOM05D003161 ORTHO05D005173 1.2e-45 188.3 562 28.8
Gorai.006G145100 Gossypium raimondii HOM05D003161 ORTHO05D005173 4.5e-45 186.4 589 26.8
Ah.15g091410 Amaranthus hybridus HOM05D003161 ORTHO05D005173 7.7e-45 185.7 441 29.3
Ca_25942_v3 Cicer arietinum L. HOM05D003161 ORTHO05D005173 7.7e-45 185.7 569 27.9
Gohir.D09G126300 Gossypium hirsutum HOM05D003161 ORTHO05D005173 1.0e-44 185.3 584 27.1
Gohir.A09G130300 Gossypium hirsutum HOM05D003161 ORTHO05D005173 1.7e-44 184.5 592 27.4
Lj5g0006535 Lotus japonicus HOM05D003161 ORTHO05D005173 1.7e-44 184.5 579 26.9
Hund19218 Selenicereus undatus HOM05D003161 ORTHO05D005173 1.7e-44 184.5 575 28.3
Glyma.02G168900 Glycine max HOM05D003161 ORTHO05D005173 5.0e-44 183.0 569 26.9
Sc19g0006250 Simmondsia chinensis HOM05D003161 ORTHO05D005173 5.0e-44 183.0 572 28.0
Hund19220 Selenicereus undatus HOM05D003161 ORTHO05D005173 6.5e-44 182.6 581 27.4
Atru.chr8.1220 Acer truncatum HOM05D003161 ORTHO05D005173 1.1e-43 181.8 552 27.2
Eucgr.A02507 Eucalyptus grandis HOM05D003161 ORTHO05D005173 5.5e-43 179.5 586 26.8
Medtr1g054710 Medicago truncatula HOM05D003161 ORTHO05D005173 5.5e-43 179.5 575 27.8
AUR62041563 Chenopodium quinoa HOM05D003161 ORTHO05D005173 9.4e-43 178.7 558 26.3
Rhsim04G0093500 Rhododendron simsii HOM05D003161 ORTHO05D005173 1.2e-42 178.3 589 25.5
vmacro09128 Vaccinium macrocarpon HOM05D003161 ORTHO05D005173 1.6e-42 177.9 586 25.9
QL07p025530 Quercus lobata HOM05D003161 ORTHO05D005173 2.1e-42 177.6 585 25.8
Peaxi162Scf00045g00223 Petunia axillaris HOM05D003161 ORTHO05D005173 3.6e-42 176.8 581 26.7
TAR633G1132 Trochodendron aralioides HOM05D003161 ORTHO05D005173 8.0e-42 175.6 590 26.4
Psat6g109960 Pisum sativum HOM05D003161 ORTHO05D005173 1.0e-41 175.3 578 27.3
Thecc.05G180200 Theobroma cacao HOM05D003161 ORTHO05D005173 1.0e-41 175.3 583 25.4
CANSAT64G2741 Cannabis sativa HOM05D003161 ORTHO05D005173 1.4e-41 174.9 465 28.8
AUR62026957 Chenopodium quinoa HOM05D003161 ORTHO05D005173 1.4e-41 174.9 559 25.6
CiPaw.08G134900 Carya illinoinensis HOM05D003161 ORTHO05D005173 2.3e-41 174.1 585 26.5
Zm00001eb302830 Zea mays HOM05D003161 ORTHO05D005173 8.8e-41 172.2 557 27.6
EL10Ac7g16694 Beta vulgaris HOM05D003161 ORTHO05D005173 1.2e-40 171.8 564 25.9
Dinv25021 Davidia involucrata HOM05D003161 ORTHO05D005173 1.2e-40 171.8 588 26.4
ECA238G1915 Erigeron canadensis HOM05D003161 ORTHO05D005173 1.2e-40 171.8 559 29.2
SGA_v2.0_scaffold274G46506 Striga asiatica HOM05D003161 ORTHO05D005173 1.2e-40 171.8 557 26.6
Duzib128G1871 Durio zibethinus HOM05D003161 ORTHO05D005173 2.0e-40 171.0 586 26.3
Lj2C361G9 Lonicera japonica HOM05D003161 ORTHO05D005173 1.3e-39 168.3 505 25.1
Prupe.7G085700 Prunus persica HOM05D003161 ORTHO05D005173 2.8e-39 167.2 589 25.5
arahy.Tifrunner.gnm1.ann1.S31791 Arachis hypogaea HOM05D003161 ORTHO05D005173 8.3e-39 165.6 607 25.5
Phvul.007G270000 Phaseolus vulgaris HOM05D003161 ORTHO05D005173 1.1e-38 165.2 571 25.2
Sopen03g011350 Solanum pennellii HOM05D003161 ORTHO05D005173 1.1e-38 165.2 584 25.0
arahy.Tifrunner.gnm1.ann1.PL5CUR Arachis hypogaea HOM05D003161 ORTHO05D005173 1.8e-38 164.5 597 25.3
Nitab4.5_0000571g0110 Nicotiana tabacum HOM05D003161 ORTHO05D005173 2.4e-38 164.1 432 27.1
CsaV3_4G031200 Cucumis sativus L. HOM05D003161 ORTHO05D005173 4.1e-38 163.3 587 25.4
Solyc03g051900.4 Solanum lycopersicum HOM05D003161 ORTHO05D005173 5.4e-38 162.9 585 24.4
CAN.G479.45 Capsicum annuum HOM05D003161 ORTHO05D005173 7.0e-38 162.5 440 27.0
Cfa020115 Carpinus fangiana HOM05D003161 ORTHO05D005173 7.0e-38 162.5 582 26.6
Actinidia38605 Actinidia chinensis HOM05D003161 ORTHO05D005173 9.1e-38 162.2 585 24.6
Aqoxy2G02393 Aquilegia oxysepala HOM05D003161 ORTHO05D005173 1.6e-37 161.4 589 24.8
Migut.K00013 Erythranthe guttata HOM05D003161 ORTHO05D005173 2.0e-37 161.0 477 26.8
FAN05G0820 Fragaria x ananassa HOM05D003161 ORTHO05D005173 2.0e-37 161.0 586 26.3
FAN05G2723 Fragaria x ananassa HOM05D003161 ORTHO05D005173 2.0e-37 161.0 586 26.3
TWI53G1521 Tripterygium wilfordii HOM05D003161 ORTHO05D005173 2.7e-37 160.6 453 27.2
MSTRG.26730 Avicennia marina HOM05D003161 ORTHO05D005173 3.5e-37 160.2 450 26.2
CSS0010787 Camellia sinensis var. sinensis HOM05D003161 ORTHO05D005173 3.5e-37 160.2 460 25.9
CAN.G317.9 Capsicum annuum HOM05D003161 ORTHO05D005173 3.5e-37 160.2 434 27.6
Cpa.g.sc85.20 Carica papaya HOM05D003161 ORTHO05D005173 3.5e-37 160.2 619 25.8
CSS0043330 Camellia sinensis var. sinensis HOM05D003161 ORTHO05D005173 5.9e-37 159.5 550 25.8
MELO3C008994.2 Cucumis melo HOM05D003161 ORTHO05D005173 5.9e-37 159.5 587 25.2
Oeu046733.1 Olea europaea HOM05D003161 ORTHO05D005173 7.7e-37 159.1 566 25.6
Potri.016G062600 Populus trichocarpa HOM05D003161 ORTHO05D005173 1.0e-36 158.7 467 27.6
FAN09G2861 Fragaria x ananassa HOM05D003161 ORTHO05D005173 1.3e-36 158.3 586 26.5
MD12G1051100 Malus domestica HOM05D003161 ORTHO05D005173 1.3e-36 158.3 519 27.0
FAN02G0008 Fragaria x ananassa HOM05D003161 ORTHO05D005173 2.3e-36 157.5 586 26.3
CDE02G2929 Ceratophyllum demersum HOM05D003161 ORTHO05D005173 2.9e-36 157.1 427 27.2
Manes.09G040300 Manihot esculenta HOM05D003161 ORTHO05D005173 3.8e-36 156.8 584 24.7
ATR0737G016 Amborella trichopoda HOM05D003161 ORTHO05D005173 8.6e-36 155.6 448 26.1
FAN14G4107 Fragaria x ananassa HOM05D003161 ORTHO05D005173 8.6e-36 155.6 586 26.1
RcHm_v2.0_Chr3g0478661 Rosa chinensis HOM05D003161 ORTHO05D005173 8.6e-36 155.6 588 24.0
DCAR_016871 Daucus carota HOM05D003161 ORTHO05D005173 1.1e-35 155.2 572 24.0
FvH4_6g21470 Fragaria vesca HOM05D003161 ORTHO05D005173 1.1e-35 155.2 586 26.5
Nitab4.5_0001364g0070 Nicotiana tabacum HOM05D003161 ORTHO05D005173 2.5e-35 154.1 432 26.9
Sed0016761 Sechium edule HOM05D003161 ORTHO05D005173 4.2e-35 153.3 577 25.8
SalBow1G2678 Salvia bowleyana HOM05D003161 ORTHO05D005173 1.2e-34 151.8 382 30.1
SEGI_01045 Sequoiadendron giganteum HOM05D003161 ORTHO05D005173 2.8e-34 150.6 600 24.3
COL.COLO4_29434 Corchorus olitorius HOM05D003161 ORTHO05D005173 3.6e-34 150.2 520 25.8
PGR004G2129 Punica granatum HOM05D003161 ORTHO05D005173 8.0e-34 149.1 574 25.8
Cc06_g23250 Coffea canephora HOM05D003161 ORTHO05D005173 1.0e-33 148.7 581 23.9
Aa31sc238G10 Aethionema arabicum HOM05D003161 ORTHO05D005173 1.4e-33 148.3 598 25.1
PSO339G0479 Papaver somniferum HOM05D003161 ORTHO05D005173 1.8e-33 147.9 577 24.1
THA.LOC104826779 Tarenaya hassleriana HOM05D003161 ORTHO05D005173 5.2e-33 146.4 584 24.8
Sp3g10190 Schrenkiella parvula HOM05D003161 ORTHO05D005173 8.9e-33 145.6 606 23.8
Carub.0003s1130 Capsella rubella HOM05D003161 ORTHO05D005173 1.2e-32 145.2 606 24.4
Haze_20072 Corylus avellana HOM05D003161 ORTHO05D005173 2.0e-32 144.4 521 25.3
PSO384G1659 Papaver somniferum HOM05D003161 ORTHO05D005173 2.6e-32 144.1 580 24.0
ClCG04G001230 Citrullus lanatus HOM05D003161 ORTHO05D005173 2.9e-31 140.6 634 23.2
PGSC0003DMG400008644 Solanum tuberosum HOM05D003161 ORTHO05D005173 2.9e-31 140.6 521 24.6
Os07g0203300 Oryza sativa ssp. japonica HOM05D003161 ORTHO05D005173 3.2e-30 137.1 382 28.5
CARHR086520 Cardamine hirsuta HOM05D003161 ORTHO05D005173 1.0e-28 132.1 407 28.7
AT3G11964 Arabidopsis thaliana HOM05D003161 ORTHO05D005173 1.3e-28 131.7 399 28.1
BraA05t22538Z Brassica rapa HOM05D003161 ORTHO05D005173 1.5e-27 128.3 394 27.9
unitig_744.g24086 Utricularia gibba HOM05D003161 ORTHO05D005173 1.5e-27 128.3 481 26.4
BcaC09g48184 Brassica carinata HOM05D003161 ORTHO05D005173 3.3e-27 127.1 242 33.9
AL3G23570 Arabidopsis lyrata HOM05D003161 ORTHO05D005173 5.6e-27 126.3 407 27.3
BolC1t05277H Brassica oleracea HOM05D003161 ORTHO05D005173 5.6e-27 126.3 184 38.6
C05p55950 Brassica napus HOM05D003161 ORTHO05D005173 1.6e-26 124.8 401 26.9
BolC5t34262H Brassica oleracea HOM05D003161 ORTHO05D005173 1.6e-26 124.8 401 26.9
SHI30029 Sapria himalayana HOM05D003161 ORTHO05D005173 1.6e-26 124.8 558 23.5
BraA01t04149Z Brassica rapa HOM05D003161 ORTHO05D005173 2.8e-26 124.0 184 38.0
MD14G1049800 Malus domestica HOM05D003161 ORTHO05D005173 1.4e-25 121.7 260 29.6
BcaB04g21101 Brassica carinata HOM05D003161 ORTHO05D005173 3.1e-25 120.6 399 26.6
Sabra16G0064600 Salix brachista HOM05D003161 ORTHO05D005173 3.1e-25 120.6 463 23.1
Hund18982 Selenicereus undatus HOM05D003161 ORTHO05D005173 5.2e-25 119.8 340 27.9
A05p37390 Brassica napus HOM05D003161 ORTHO05D005173 6.8e-25 119.4 401 26.2
Thhalv10019877m.g Eutrema salsugineum HOM05D003161 ORTHO05D005173 1.2e-24 118.6 309 29.8
CAN.G1433.27 Capsicum annuum HOM05D003161 ORTHO05D005173 4.4e-24 116.7 143 40.6
HanXRQChr13g0419181 Helianthus annuus HOM05D003161 ORTHO05D009435 8.3e-23 112.5 129 46.5
BcaC05g29306 Brassica carinata HOM05D003161 ORTHO05D005173 1.4e-22 111.7 400 26.8
Aa31LG3G5540 Aethionema arabicum HOM05D003161 ORTHO05D005173 9.2e-22 109.0 394 25.1
Cfa023914 Carpinus fangiana HOM05D003161 ORTHO05D005173 8.6e-20 102.4 329 27.7
HPP92_027318 Vanilla planifolia HOM05D003161 ORTHO05D005173 2.5e-19 100.9 283 29.0
Cre10.g428750 Chlamydomonas reinhardtii HOM05D003161 ORTHO05D005173 2.8e-18 97.4 447 23.3
CAN.G2759.1 Capsicum annuum HOM05D003161 ORTHO05D005173 2.0e-16 91.3 319 25.1
CBR_g22381 Chara braunii HOM05D003161 ORTHO05D005173 3.7e-15 87.0 486 22.0
HPP92_027317 Vanilla planifolia HOM05D003161 ORTHO05D005173 1.9e-14 84.7 241 26.6
PRCOL_00005658 Prasinoderma coloniale HOM05D003161 ORTHO05D005173 1.1e-11 75.5 176 29.0
CSS0040264 Camellia sinensis var. sinensis HOM05D003161 ORTHO05D005173 9.5e-11 72.4 189 24.9
HPP92_015877 Vanilla planifolia HOM05D003161 ORTHO05D005173 4.4e-08 63.5 222 25.2
Medtr3g069250 Medicago truncatula HOM05D003161 ORTHO05D013615 1.7e-07 61.6 174 26.4
Lsat_1_v5_gn_5_134021 Lactuca sativa HOM05D003161 ORTHO05D005173 4.9e-07 60.1 140 32.1
TPR.G34916 Trifolium pratense HOM05D004115 ORTHO05D005004 5.4e-06 56.6 89 32.6
Zm00001eb110810 Zea mays HOM05D004115 ORTHO05D005004 7.1e-06 56.2 104 30.8


User provided reference genes

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