Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI27633 Sapria himalayana HOM05D003203 ORTHO05D003526 2.6e-89 332.0 169 100.0
Eucgr.B02467 Eucalyptus grandis HOM05D003203 ORTHO05D003526 3.6e-46 188.7 157 59.2
Thecc.09G260300 Theobroma cacao HOM05D003203 ORTHO05D003526 3.7e-43 178.7 135 63.7
Duzib168G0563 Durio zibethinus HOM05D003203 ORTHO05D003526 4.1e-42 175.3 128 64.8
Atru.chr3.3692 Acer truncatum HOM05D003203 ORTHO05D003526 7.0e-42 174.5 127 64.6
Manes.11G141000 Manihot esculenta HOM05D003203 ORTHO05D003526 1.6e-41 173.3 133 61.7
Prupe.6G094700 Prunus persica HOM05D003203 ORTHO05D003526 2.0e-41 172.9 133 62.4
Sabra16G0090500 Salix brachista HOM05D003203 ORTHO05D003526 2.7e-41 172.6 133 63.2
Cpa.g.sc139.68 Carica papaya HOM05D003203 ORTHO05D003526 5.9e-41 171.4 133 57.1
Cfa011365 Carpinus fangiana HOM05D003203 ORTHO05D003526 7.7e-41 171.0 133 59.4
Actinidia15612 Actinidia chinensis HOM05D003203 ORTHO05D003526 1.0e-40 170.6 173 52.0
Gorai.009G078900 Gossypium raimondii HOM05D003203 ORTHO05D003526 1.7e-40 169.9 133 60.2
PGR102G2647 Punica granatum HOM05D003203 ORTHO05D003526 2.3e-40 169.5 142 57.0
Gohir.D05G077500 Gossypium hirsutum HOM05D003203 ORTHO05D003526 2.9e-40 169.1 133 60.2
TWI31G0332 Tripterygium wilfordii HOM05D003203 ORTHO05D003526 2.9e-40 169.1 133 60.9
Ciclev10027702m.g Citrus clementina HOM05D003203 ORTHO05D003526 3.8e-40 168.7 165 52.7
COL.COLO4_25248 Corchorus olitorius HOM05D003203 ORTHO05D003526 3.8e-40 168.7 133 60.2
CDE07G0939 Ceratophyllum demersum HOM05D003203 ORTHO05D003526 6.6e-40 167.9 165 51.5
Gohir.A05G074700 Gossypium hirsutum HOM05D003203 ORTHO05D003526 1.1e-39 167.2 133 59.4
Potri.016G083100 Populus trichocarpa HOM05D003203 ORTHO05D003526 1.5e-39 166.8 133 60.2
Nn2g10680 Nelumbo nucifera HOM05D003203 ORTHO05D003526 2.5e-39 166.0 121 61.2
Haze_23916 Corylus avellana HOM05D003203 ORTHO05D003526 4.2e-39 165.2 131 58.0
Hma1.2p1_0559F.1_g178620 Hydrangea macrophylla HOM05D003203 ORTHO05D003526 5.5e-39 164.9 128 59.4
GSVIVG01025133001 Vitis vinifera HOM05D003203 ORTHO05D003526 7.2e-39 164.5 136 56.6
FvH4_3g33360 Fragaria vesca HOM05D003203 ORTHO05D003526 9.5e-39 164.1 121 63.6
FAN11G3892 Fragaria x ananassa HOM05D003203 ORTHO05D003526 9.5e-39 164.1 121 63.6
Lj2A1035T51 Lonicera japonica HOM05D003203 ORTHO05D003526 9.5e-39 164.1 138 58.0
CSS0047004 Camellia sinensis var. sinensis HOM05D003203 ORTHO05D003526 1.6e-38 163.3 133 57.9
CANSAT54G1869 Cannabis sativa HOM05D003203 ORTHO05D003526 1.6e-38 163.3 115 64.3
Carub.0011s0009 Capsella rubella HOM05D003203 ORTHO05D003526 1.6e-38 163.3 170 49.4
Peaxi162Scf00389g00932 Petunia axillaris HOM05D003203 ORTHO05D003526 1.6e-38 163.3 157 52.2
Aqoxy4G03208 Aquilegia oxysepala HOM05D003203 ORTHO05D003526 2.1e-38 162.9 127 57.5
Carub.0001s0725 Capsella rubella HOM05D003203 ORTHO05D003526 2.1e-38 162.9 170 48.8
AL1G18200 Arabidopsis lyrata HOM05D003203 ORTHO05D003526 2.8e-38 162.5 172 50.6
CiPaw.13G106900 Carya illinoinensis HOM05D003203 ORTHO05D003526 4.7e-38 161.8 135 54.8
QL01p037166 Quercus lobata HOM05D003203 ORTHO05D003526 4.7e-38 161.8 132 54.5
RcHm_v2.0_Chr5g0060751 Rosa chinensis HOM05D003203 ORTHO05D003526 4.7e-38 161.8 127 57.5
THA.LOC104815752 Tarenaya hassleriana HOM05D003203 ORTHO05D003526 4.7e-38 161.8 133 57.9
COL.COLO4_32909 Corchorus olitorius HOM05D003203 ORTHO05D003526 6.1e-38 161.4 111 67.6
DCAR_006042 Daucus carota HOM05D003203 ORTHO05D003526 6.1e-38 161.4 160 52.5
Nitab4.5_0001802g0120 Nicotiana tabacum HOM05D003203 ORTHO05D003526 6.1e-38 161.4 156 51.3
vmacro14071 Vaccinium macrocarpon HOM05D003203 ORTHO05D003526 6.1e-38 161.4 133 57.1
HPP92_010123 Vanilla planifolia HOM05D002295 ORTHO05D002789 6.1e-38 161.4 160 53.1
Aqoxy3G02870 Aquilegia oxysepala HOM05D003203 ORTHO05D003526 8.0e-38 161.0 127 55.9
AL6G53580 Arabidopsis lyrata HOM05D003203 ORTHO05D003526 8.0e-38 161.0 172 50.0
AT1G07910 Arabidopsis thaliana HOM05D003203 ORTHO05D003526 8.0e-38 161.0 176 50.6
FAN16G3448 Fragaria x ananassa HOM05D003203 ORTHO05D003526 8.0e-38 161.0 121 62.8
HanXRQChr13g0401461 Helianthus annuus HOM05D003203 ORTHO05D003526 8.0e-38 161.0 147 55.8
AL7G46960 Arabidopsis lyrata HOM05D003203 ORTHO05D003526 1.0e-37 160.6 134 58.2
AL7G46970 Arabidopsis lyrata HOM05D003203 ORTHO05D003526 1.0e-37 160.6 134 58.2
Thhalv10006605m.g Eutrema salsugineum HOM05D003203 ORTHO05D003526 1.0e-37 160.6 170 50.0
MD11G1129800 Malus domestica HOM05D003203 ORTHO05D003526 1.0e-37 160.6 133 57.9
BcaB02g06702 Brassica carinata HOM05D003203 ORTHO05D003526 1.4e-37 160.2 150 53.3
AUR62006513 Chenopodium quinoa HOM05D003203 ORTHO05D003526 1.4e-37 160.2 139 56.8
AUR62025015 Chenopodium quinoa HOM05D003203 ORTHO05D003526 1.4e-37 160.2 127 59.8
FAN12G0401 Fragaria x ananassa HOM05D003203 ORTHO05D003526 1.4e-37 160.2 133 54.9
FAN17G1794 Fragaria x ananassa HOM05D003203 ORTHO05D003526 1.8e-37 159.8 133 54.9
Nitab4.5_0002129g0110 Nicotiana tabacum HOM05D003203 ORTHO05D003526 1.8e-37 159.8 157 50.3
CsaV3_1G013020 Cucumis sativus L. HOM05D003203 ORTHO05D003526 2.3e-37 159.5 131 59.5
Nitab4.5_0000848g0100 Nicotiana tabacum HOM05D003203 ORTHO05D003526 2.3e-37 159.5 157 50.3
Sopen11g030070 Solanum pennellii HOM05D003203 ORTHO05D003526 2.3e-37 159.5 157 51.0
A06p05020 Brassica napus HOM05D003203 ORTHO05D003526 3.0e-37 159.1 134 56.0
CAN.G553.12 Capsicum annuum HOM05D003203 ORTHO05D003526 3.0e-37 159.1 157 49.7
FvH4_4g02320 Fragaria vesca HOM05D003203 ORTHO05D003526 3.0e-37 159.1 133 54.1
FAN21G1129 Fragaria x ananassa HOM05D003203 ORTHO05D003526 3.0e-37 159.1 121 61.2
RcHm_v2.0_Chr4g0389641 Rosa chinensis HOM05D003203 ORTHO05D003526 4.0e-37 158.7 133 54.9
BraA06t23708Z Brassica rapa HOM05D003203 ORTHO05D003526 5.2e-37 158.3 134 56.0
PSO765G0203 Papaver somniferum HOM05D003203 ORTHO05D003526 5.2e-37 158.3 133 55.6
SGA_v2.0_scaffold97G29171 Striga asiatica HOM05D003203 ORTHO05D003526 5.2e-37 158.3 121 58.7
Cc01_g11550 Coffea canephora HOM05D003203 ORTHO05D003526 6.8e-37 157.9 121 57.9
Nitab4.5_0010520g0020 Nicotiana tabacum HOM05D003203 ORTHO05D003526 6.8e-37 157.9 133 55.6
Os07g0191700 Oryza sativa ssp. japonica HOM05D003203 ORTHO05D003526 6.8e-37 157.9 137 52.6
PSO765G0134 Papaver somniferum HOM05D003203 ORTHO05D003526 6.8e-37 157.9 128 54.7
PGSC0003DMG400027376 Solanum tuberosum HOM05D003203 ORTHO05D003526 8.9e-37 157.5 157 51.0
C05p05960 Brassica napus HOM05D003203 ORTHO05D003526 1.2e-36 157.1 134 55.2
HanXRQChr09g0243461 Helianthus annuus HOM05D003203 ORTHO05D003526 1.2e-36 157.1 136 55.9
EL10Ac9g22449 Beta vulgaris HOM05D003203 ORTHO05D003526 1.5e-36 156.8 140 54.3
FAN22G0069 Fragaria x ananassa HOM05D003203 ORTHO05D003526 1.5e-36 156.8 133 53.4
A09p66110 Brassica napus HOM05D003203 ORTHO05D003526 2.0e-36 156.4 167 49.7
BraA09t41949Z Brassica rapa HOM05D003203 ORTHO05D003526 2.0e-36 156.4 167 49.7
Lalb_Chr03g0027111 Lupinus albus HOM05D003203 ORTHO05D003526 2.0e-36 156.4 157 50.3
Sp3g30710 Schrenkiella parvula HOM05D003203 ORTHO05D003526 2.0e-36 156.4 118 61.9
SpUn0840_0010 Schrenkiella parvula HOM05D003203 ORTHO05D003526 2.0e-36 156.4 151 51.0
BcaC07g41968 Brassica carinata HOM05D003203 ORTHO05D003526 2.6e-36 156.0 167 49.7
C08p50260 Brassica napus HOM05D003203 ORTHO05D003526 2.6e-36 156.0 167 49.7
BolC8t52555H Brassica oleracea HOM05D003203 ORTHO05D003526 2.6e-36 156.0 167 49.7
MELO3C005030.2 Cucumis melo HOM05D003203 ORTHO05D003526 2.6e-36 156.0 128 58.6
Sp1g06590 Schrenkiella parvula HOM05D003203 ORTHO05D003526 2.6e-36 156.0 142 54.2
VMungo1127G1096 Vigna mungo HOM05D003203 ORTHO05D003526 2.6e-36 156.0 133 54.1
BcaC05g24708 Brassica carinata HOM05D003203 ORTHO05D003526 3.4e-36 155.6 134 54.5
CAN.G352.39 Capsicum annuum HOM05D003203 ORTHO05D003526 3.4e-36 155.6 133 54.1
Rhsim01G0220300 Rhododendron simsii HOM05D003203 ORTHO05D003526 3.4e-36 155.6 133 56.4
ECA233G2891 Erigeron canadensis HOM05D003203 ORTHO05D003526 4.4e-36 155.2 125 59.2
TAR636G0568 Trochodendron aralioides HOM05D003203 ORTHO05D003526 4.4e-36 155.2 133 54.1
Glyma.11G152960 Glycine max HOM05D003203 ORTHO05D003526 5.7e-36 154.8 135 53.3
Sed0015984 Sechium edule HOM05D003203 ORTHO05D003526 5.7e-36 154.8 127 59.1
PSO339G3960 Papaver somniferum HOM05D003203 ORTHO05D003526 9.8e-36 154.1 133 51.9
SalBow3G4618 Salvia bowleyana HOM05D003203 ORTHO05D003526 9.8e-36 154.1 121 57.9
Dinv32789 Davidia involucrata HOM05D003203 ORTHO05D003526 1.3e-35 153.7 133 53.4
DCAR_024905 Daucus carota HOM05D003203 ORTHO05D003526 2.2e-35 152.9 131 54.2
unitig_736.g22420 Utricularia gibba HOM05D003203 ORTHO05D003526 2.2e-35 152.9 133 53.4
Migut.N02091 Erythranthe guttata HOM05D003203 ORTHO05D003526 2.8e-35 152.5 121 57.0
arahy.Tifrunner.gnm1.ann1.GJ7521 Arachis hypogaea HOM05D003203 ORTHO05D003526 4.9e-35 151.8 135 52.6
Lsat_1_v5_gn_6_26241 Lactuca sativa HOM05D003203 ORTHO05D003526 4.9e-35 151.8 119 58.8
arahy.Tifrunner.gnm1.ann1.DWB64P Arachis hypogaea HOM05D003203 ORTHO05D003526 6.3e-35 151.4 135 52.6
Phvul.011G072500 Phaseolus vulgaris HOM05D003203 ORTHO05D003526 6.3e-35 151.4 133 53.4
PSO063G5461 Papaver somniferum HOM05D003203 ORTHO05D003526 8.3e-35 151.0 133 51.1
Lj1C185T11 Lonicera japonica HOM05D003203 ORTHO05D003526 1.1e-34 150.6 133 51.1
Ca_19241_v3 Cicer arietinum L. HOM05D003203 ORTHO05D003526 1.8e-34 149.8 135 51.9
BolC5t29358H Brassica oleracea HOM05D003203 ORTHO05D003526 2.4e-34 149.4 128 54.7
Psat7g223280 Pisum sativum HOM05D003203 ORTHO05D003526 2.4e-34 149.4 135 51.9
Migut.D02182 Erythranthe guttata HOM05D003203 ORTHO05D003526 3.1e-34 149.1 121 53.7
TPR.G14912 Trifolium pratense HOM05D003203 ORTHO05D003526 1.6e-33 146.7 135 49.6
Oeu005910.3 Olea europaea HOM05D003203 ORTHO05D003526 2.0e-33 146.4 121 57.0
MSTRG.21144 Avicennia marina HOM05D003203 ORTHO05D003526 2.7e-33 146.0 137 51.8
Zm00001eb302520 Zea mays HOM05D003203 ORTHO05D003526 7.8e-33 144.4 128 51.6
Lj3g0012673 Lotus japonicus HOM05D003203 ORTHO05D003526 1.0e-32 144.1 135 51.1
Lj3g0020808 Lotus japonicus HOM05D003203 ORTHO05D003526 1.0e-32 144.1 135 51.1
Nitab4.5_0004347g0030 Nicotiana tabacum HOM05D003203 ORTHO05D003526 1.7e-32 143.3 132 51.5
ATR1159G092 Amborella trichopoda HOM05D003203 ORTHO05D003526 2.3e-32 142.9 119 51.3
Aa31sc36G120 Aethionema arabicum HOM05D003203 ORTHO05D003526 1.1e-31 140.6 128 52.3
Lj1A185G36 Lonicera japonica HOM05D003203 ORTHO05D003526 1.9e-31 139.8 133 47.4
Medtr4g060795 Medicago truncatula HOM05D003203 ORTHO05D003526 4.3e-31 138.7 135 48.9
TWI75G1314 Tripterygium wilfordii HOM05D003203 ORTHO05D003526 5.6e-31 138.3 136 55.1
Thhalv10023078m.g Eutrema salsugineum HOM05D003203 ORTHO05D003526 1.6e-30 136.7 159 47.2
AagrBONN_evm.TU.Sc2ySwM_362.2654 Anthoceros agrestis HOM05D003203 ORTHO05D003526 4.7e-30 135.2 164 42.7
SalBow6G0781 Salvia bowleyana HOM05D003203 ORTHO05D003526 5.2e-29 131.7 121 51.2
AagrBONN_evm.TU.Sc2ySwM_342.1 Anthoceros agrestis HOM05D003203 ORTHO05D003526 1.1e-26 124.0 155 41.9
CARHR204760 Cardamine hirsuta HOM05D003203 ORTHO05D003526 1.6e-25 120.2 95 60.0
AagrBONN_evm.TU.Sc2ySwM_244.3 Anthoceros agrestis HOM05D003203 ORTHO05D003526 1.3e-24 117.1 143 42.7
BcaC07g41967 Brassica carinata HOM05D003203 ORTHO05D003526 1.5e-23 113.6 78 64.1
Mapoly0005s0012 Marchantia polymorpha HOM05D003203 ORTHO05D003526 1.2e-22 110.5 165 36.4
Pp3c27_2850 Physcomitrium patens HOM05D003203 ORTHO05D003526 1.1e-21 107.5 133 43.6
SMO223G0015 Selaginella moellendorffii HOM05D003203 ORTHO05D003526 1.8e-21 106.7 119 42.9
SEGI_33151 Sequoiadendron giganteum HOM05D003203 ORTHO05D003526 3.4e-20 102.4 117 46.2
CBR_g39406 Chara braunii HOM05D003203 ORTHO05D003526 1.2e-17 94.0 133 37.6
AagrBONN_evm.TU.Sc2ySwM_117.4033 Anthoceros agrestis HOM05D003203 ORTHO05D003526 2.1e-17 93.2 150 36.7
AagrBONN_evm.TU.Sc2ySwM_341.1 Anthoceros agrestis HOM05D003203 ORTHO05D003526 2.1e-17 93.2 150 36.7
BcaC07g42504 Brassica carinata HOM05D003203 ORTHO05D003526 8.3e-11 71.2 82 47.6
CARHR007720 Cardamine hirsuta HOM05D003203 ORTHO05D003526 2.7e-09 66.2 167 31.7
Dinv24671 Davidia involucrata HOM05D003203 ORTHO05D003526 1.2e-06 57.4 48 52.1


User provided reference genes

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