Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold95G28822 Striga asiatica HOM05D000964 ORTHO05D004047 2.8e-70 268.5 134 100.0
Migut.D01434 Erythranthe guttata HOM05D000964 ORTHO05D004047 1.2e-31 140.2 176 50.0
CAN.G1478.7 Capsicum annuum HOM05D000964 ORTHO05D004047 8.3e-30 134.0 173 48.6
PGSC0003DMG400002472 Solanum tuberosum HOM05D000964 ORTHO05D004047 1.1e-29 133.7 173 48.0
PGSC0003DMG400014075 Solanum tuberosum HOM05D000964 ORTHO05D004047 1.1e-29 133.7 173 48.0
CAN.G1595.4 Capsicum annuum HOM05D000964 ORTHO05D004047 1.4e-29 133.3 173 48.6
PGSC0003DMG400003335 Solanum tuberosum HOM05D000964 ORTHO05D004047 1.9e-29 132.9 173 47.4
Oeu058362.1 Olea europaea HOM05D000964 ORTHO05D004047 2.7e-28 129.0 178 46.6
Lsat_1_v5_gn_5_50401 Lactuca sativa HOM05D000964 ORTHO05D004047 3.5e-28 128.6 169 45.0
HanXRQChr00c0394g0574561 Helianthus annuus HOM05D000964 ORTHO05D004047 4.6e-28 128.3 173 45.1
HanXRQChr01g0020241 Helianthus annuus HOM05D000964 ORTHO05D004047 4.6e-28 128.3 173 45.1
HanXRQChr04g0127511 Helianthus annuus HOM05D000964 ORTHO05D004047 4.6e-28 128.3 173 45.1
HanXRQChr10g0284361 Helianthus annuus HOM05D000964 ORTHO05D004047 4.6e-28 128.3 173 45.1
HanXRQChr10g0318081 Helianthus annuus HOM05D000964 ORTHO05D004047 4.6e-28 128.3 173 45.1
HanXRQChr11g0326941 Helianthus annuus HOM05D000964 ORTHO05D004047 4.6e-28 128.3 173 45.1
HanXRQCPg0580161 Helianthus annuus HOM05D000964 ORTHO05D004047 4.6e-28 128.3 173 45.1
Lsat_1_v5_gn_7_96560 Lactuca sativa HOM05D000964 ORTHO05D004047 4.6e-28 128.3 173 45.1
DCAR_032517 Daucus carota HOM05D000964 ORTHO05D004047 1.1e-26 123.6 168 45.8
PSO548G0113 Papaver somniferum HOM05D000964 ORTHO05D004047 1.1e-26 123.6 172 45.9
CAN.G327.18 Capsicum annuum HOM05D000964 ORTHO05D004047 2.5e-26 122.5 173 45.1
Lalb_Chr03g0039311 Lupinus albus HOM05D000964 ORTHO05D004047 1.1e-24 117.1 140 47.1
MSTRG.11748 Avicennia marina HOM05D000964 ORTHO05D004047 1.4e-24 116.7 165 45.5
PGR111G0002 Punica granatum HOM05D000964 ORTHO05D004047 9.8e-23 110.5 160 41.9
Sed0000903 Sechium edule HOM05D000964 ORTHO05D004047 6.4e-22 107.8 134 44.8
Hund08596 Selenicereus undatus HOM05D000964 ORTHO05D004047 6.4e-22 107.8 170 41.8
HanXRQChr00c0593g0576341 Helianthus annuus HOM05D000964 ORTHO05D004047 8.3e-22 107.5 152 43.4
Medtr4g051380 Medicago truncatula HOM05D000964 ORTHO05D004047 1.1e-21 107.1 169 42.0
Gohir.1Z050334 Gossypium hirsutum HOM05D000964 ORTHO05D004047 3.2e-21 105.5 159 42.8
Gohir.A12G025100 Gossypium hirsutum HOM05D000964 ORTHO05D004047 3.2e-21 105.5 159 42.8
TWI75G0222 Tripterygium wilfordii HOM05D000964 ORTHO05D004047 3.2e-21 105.5 168 42.3
Gohir.D01G102099 Gossypium hirsutum HOM05D000964 ORTHO05D004047 7.1e-21 104.4 159 42.8
Lalb_Chr25g0283351 Lupinus albus HOM05D000964 ORTHO05D004047 1.0e-19 100.5 110 49.1
RcHm_v2.0_CPg0501901 Rosa chinensis HOM05D000964 ORTHO05D004047 1.0e-19 100.5 165 42.4
CSS0021839 Camellia sinensis var. sinensis HOM05D000964 ORTHO05D004047 2.3e-19 99.4 129 46.5
arahy.Tifrunner.gnm1.ann1.918II3 Arachis hypogaea HOM05D000964 ORTHO05D004047 6.6e-19 97.8 160 39.4
Gohir.D08G194628 Gossypium hirsutum HOM05D000964 ORTHO05D004047 4.3e-18 95.1 119 47.1
HPP92_028393 Vanilla planifolia HOM05D000964 ORTHO05D004047 5.6e-18 94.7 169 38.5
HPP92_028402 Vanilla planifolia HOM05D000964 ORTHO05D004047 5.6e-18 94.7 169 38.5
HPP92_028410 Vanilla planifolia HOM05D000964 ORTHO05D004047 5.6e-18 94.7 169 38.5
Lsat_1_v5_gn_0_41600 Lactuca sativa HOM05D000964 ORTHO05D004047 7.3e-18 94.4 140 42.9
CARHR282230 Cardamine hirsuta HOM05D000964 ORTHO05D004047 2.8e-17 92.4 166 38.0
Medtr0002s0760 Medicago truncatula HOM05D000964 ORTHO05D004047 2.8e-17 92.4 107 47.7
C02p60150 Brassica napus HOM05D000964 ORTHO05D004047 3.6e-17 92.0 166 37.3
BolSC46t61018H Brassica oleracea HOM05D000964 ORTHO05D004047 3.6e-17 92.0 166 37.3
BraSC143t45635Z Brassica rapa HOM05D000964 ORTHO05D004047 4.7e-17 91.7 166 37.3
AL2G20580 Arabidopsis lyrata HOM05D000964 ORTHO05D004047 1.1e-16 90.5 166 37.3
AL2G21700 Arabidopsis lyrata HOM05D000964 ORTHO05D004047 1.1e-16 90.5 166 37.3
HanXRQChr10g0303881 Helianthus annuus HOM05D000964 ORTHO05D004047 1.8e-16 89.7 72 63.9
LjContig00318g0022290 Lotus japonicus HOM05D000964 ORTHO05D004047 2.3e-16 89.4 167 36.5
LjContig00319g0012184 Lotus japonicus HOM05D000964 ORTHO05D004047 2.3e-16 89.4 167 36.5
LjContig00319g0026138 Lotus japonicus HOM05D000964 ORTHO05D004047 2.3e-16 89.4 167 36.5
ATCG00740 Arabidopsis thaliana HOM05D000964 ORTHO05D004047 3.1e-16 89.0 168 38.1
arahy.Tifrunner.gnm1.ann1.93R6SD Arachis hypogaea HOM05D000964 ORTHO05D004047 2.6e-15 85.9 96 47.9
Gohir.A12G228525 Gossypium hirsutum HOM05D000964 ORTHO05D004047 3.4e-15 85.5 72 62.5
EL10Ac5g11667 Beta vulgaris HOM05D000964 ORTHO05D004047 9.9e-15 84.0 133 39.8
Gohir.D08G145550 Gossypium hirsutum HOM05D000964 ORTHO05D003870 9.9e-15 84.0 72 59.7
Gorai.004G150700 Gossypium raimondii HOM05D000964 ORTHO05D003870 2.2e-14 82.8 72 61.1
Gohir.A01G137773 Gossypium hirsutum HOM05D000964 ORTHO05D004047 1.9e-13 79.7 126 42.9
HanXRQChr11g0321071 Helianthus annuus HOM05D000964 ORTHO05D004047 7.1e-13 77.8 60 65.0
Nitab4.5_0002882g0040 Nicotiana tabacum HOM05D000964 ORTHO05D004047 3.0e-11 72.4 61 59.0
CARHR287430 Cardamine hirsuta HOM05D000964 ORTHO05D004047 3.9e-11 72.0 64 54.7
BraA06t25382Z Brassica rapa HOM05D000964 ORTHO05D004047 6.6e-11 71.2 145 35.9
Lalb_Chr20g0115421 Lupinus albus HOM05D000964 ORTHO05D004047 1.1e-10 70.5 53 69.8
CiPaw.07G080400 Carya illinoinensis HOM05D000964 ORTHO05D004047 1.2e-09 67.0 66 53.0
Nitab4.5_0000350g0310 Nicotiana tabacum HOM05D000964 ORTHO05D004047 1.6e-09 66.6 53 60.4
Duzib165G0005 Durio zibethinus HOM05D000964 ORTHO05D004047 2.8e-09 65.9 115 39.1
Oeu012810.1 Olea europaea HOM05D000964 ORTHO05D004047 2.8e-09 65.9 131 38.9
Pp3c11_16940 Physcomitrium patens HOM05D000964 ORTHO05D004047 1.8e-08 63.2 71 45.1
TPR.G26366 Trifolium pratense HOM05D000565 ORTHO05D005648 1.8e-08 63.2 59 50.8
Pp3c5_15590 Physcomitrium patens HOM05D000964 ORTHO05D004047 3.1e-08 62.4 164 28.0
Solyc12g035890.3 Solanum lycopersicum HOM05D000964 ORTHO05D004047 1.5e-07 60.1 54 53.7
ClCG11G017180 Citrullus lanatus HOM05D000964 ORTHO05D004047 1.3e-06 57.0 125 34.4
Mapoly0026s0099 Marchantia polymorpha HOM05D000964 ORTHO05D004047 1.3e-06 57.0 105 37.1
Hund22493 Selenicereus undatus HOM05D002432 ORTHO05D000695 6.4e-06 54.7 84 40.5


User provided reference genes

Program Settings