Gene: Solyc12g035890.3

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc12g035890.3
  • Transcript Identifier Solyc12g035890.3.1
  • Gene Type Coding gene
  • Location SL4.0ch12 : 43209910-43211214 : positive

Gene Family Information

  • ID HOM05D000964
  • #Genes/#Species 620/77
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc12g035890.3.1
  • uniprot A0A3Q7J8B1
  • gene_id Solyc12g035890

Descriptions

  • Description DNA-directed RNA polymerase subunit alpha (AHRD V3.3 *-* I6N988_DATST)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006351
IEA
GOA Databasetranscription, DNA-templated
GO:0006351
IEA
InterProtranscription, DNA-templated
GO:0006412
ISO
PLAZA Homology (enrichment)translation HOM05D000964

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0003677
IEA
InterProDNA binding
GO:0003899
IEA
GOA DatabaseDNA-directed 5'-3' RNA polymerase activity
GO:0003899
IEA
InterProDNA-directed 5'-3' RNA polymerase activity
GO:0046983
IEA
GOA Databaseprotein dimerization activity
GO:0003735
ISO
PLAZA Homology (enrichment)structural constituent of ribosome HOM05D000964

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016021
IEA
GOA Databaseintegral component of membrane
GO:0016020
IEA
GOA Databasemembrane
GO:0005737
IBA
GOA Databasecytoplasm
GO:0005840
ISO
PLAZA Homology (enrichment)ribosome HOM05D000964

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036643 DNA-directed RNA polymerase, insert domain superfamily
IPR011260 RNA polymerase, alpha subunit, C-terminal
IPR011773 DNA-directed RNA polymerase, alpha subunit
Mapman id Description
35.1 not assigned.annotated