Gene: ATCG00740

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier ATCG00740
  • Transcript Identifier ATCG00740.1
  • Gene Type Coding gene
  • Location ChrC : 77901-78890 : negative

Gene Family Information

  • ID HOM05D000964
  • #Genes/#Species 620/77
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid ATCG00740.1
  • symbol RPOA
  • uniprot P56762

Descriptions

  • Description RNA polymerase subunit alpha
  • Computational description RNA polymerase subunit alpha (RPOA); FUNCTIONS IN: DNA-directed RNA polymerase activity; INVOLVED IN: RNA elongation; LOCATED IN: chloroplast, nucleoid; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA-directed RNA polymerase, insert domain (InterPro:IPR011262), DNA-directed RNA polymerase, alpha subunit (InterPro:IPR011773), RNA polymerase, alpha subunit, C-terminal (InterPro:IPR011260), DNA-directed RNA polymerase, dimerisation (InterPro:IPR011261), DNA-directed RNA polymerase, RpoA/D/Rpb3-type (InterPro:IPR011263), DNA-directed RNA polymerase, RBP11-like (InterPro:IPR009025).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006412
ISO
PLAZA Homology (enrichment)translation HOM05D000964
GO:0006351
IEA
GOA Databasetranscription, DNA-templated
GO:0006351
IEA
InterProtranscription, DNA-templated
GO:0006354
TAS
Gene OntologyDNA-templated transcription, elongation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003735
ISO
PLAZA Homology (enrichment)structural constituent of ribosome HOM05D000964
GO:0046983
IEA
Gene Ontologyprotein dimerization activity
GO:0046983
IEA
InterProprotein dimerization activity
GO:0003899
TAS, IEA
Gene OntologyDNA-directed 5'-3' RNA polymerase activity
GO:0003899
IEA
InterProDNA-directed 5'-3' RNA polymerase activity
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0003677
IEA
InterProDNA binding
GO:0016740
IEA
GOA Databasetransferase activity
GO:0016779
IEA
GOA Databasenucleotidyltransferase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
IDA
IEA
GOA Databasechloroplast
GO:0009507
HDA
ISM
TAS
Gene Ontologychloroplast1 2
GO:0005840
ISO
PLAZA Homology (enrichment)ribosome HOM05D000964
GO:0009536
IEA
GOA Databaseplastid
GO:0009536
HDA
Gene Ontologyplastid3
GO:0009534
IDA
GOA Databasechloroplast thylakoid
GO:0009534
HDA
Gene Ontologychloroplast thylakoid4
GO:0009570
IDA
GOA Databasechloroplast stroma
GO:0009570
HDA
Gene Ontologychloroplast stroma4
GO:0042644
IDA
GOA Databasechloroplast nucleoid
GO:0042644
HDA
Gene Ontologychloroplast nucleoid5
GO:0005737
IBA
Gene Ontologycytoplasm6

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR011260 RNA polymerase, alpha subunit, C-terminal
IPR036603 RNA polymerase, RBP11-like subunit
IPR011773 DNA-directed RNA polymerase, alpha subunit
IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type
IPR036643 DNA-directed RNA polymerase, insert domain superfamily
IPR011262 DNA-directed RNA polymerase, insert domain
Mapman id Description
15.6.1.2.1.1 RNA biosynthesis.organelle machinery.RNA polymerase activities.plastid-encoded RNA polymerase (PEP) complex.core components.core component RpoA