Gene: MSTRG.11748

General Information

Structural Information

  • Species Avicennia marina
  • Gene Identifier MSTRG.11748
  • Transcript Identifier MSTRG.11748.1
  • Gene Type Coding gene
  • Location ScioBoG_17730_HRSCAF_17811 : 1473058-1474116 : positive

Gene Family Information

  • ID HOM05D000964
  • #Genes/#Species 620/77
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

Descriptions

  • tid MSTRG.11748.1
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006351
IEA
InterProtranscription, DNA-templated
GO:0006354
ISO
PLAZA Integrative OrthologyDNA-templated transcription, elongation ATCG00740
GO:0006412
ISO
PLAZA Homology (enrichment)translation HOM05D000964

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
InterProDNA binding
GO:0003899
IEA
InterProDNA-directed 5'-3' RNA polymerase activity
GO:0046983
IEA
InterProprotein dimerization activity
GO:0003735
ISO
PLAZA Homology (enrichment)structural constituent of ribosome HOM05D000964

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009570
ISO
PLAZA Integrative Orthologychloroplast stroma ATCG00740
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast ATCG00740
GO:0009534
ISO
PLAZA Integrative Orthologychloroplast thylakoid ATCG00740
GO:0005840
ISO
PLAZA Homology (enrichment)ribosome HOM05D000964
GO:0042644
ISO
PLAZA Integrative Orthologychloroplast nucleoid ATCG00740

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR011260 RNA polymerase, alpha subunit, C-terminal
IPR011773 DNA-directed RNA polymerase, alpha subunit
IPR011262 DNA-directed RNA polymerase, insert domain
IPR036643 DNA-directed RNA polymerase, insert domain superfamily
IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type
IPR036603 RNA polymerase, RBP11-like subunit
Mapman id Description
15.6.1.2.1.1 RNA biosynthesis.organelle machinery.RNA polymerase activities.plastid-encoded RNA polymerase (PEP) complex.core components.core component RpoA