Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold90G27693 Striga asiatica HOM05D006779 ORTHO05D008491 0.0e+00 1202.2 647 100.0
SGA_v2.0_scaffold90G27688 Striga asiatica HOM05D006779 ORTHO05D008491 1.3e-131 474.6 255 98.8
Migut.B00314 Erythranthe guttata HOM05D006779 ORTHO05D008491 1.0e-88 332.0 259 71.4
Lsat_1_v5_gn_5_113321 Lactuca sativa HOM05D006779 ORTHO05D008491 2.6e-84 317.4 589 40.4
Oeu064516.1 Olea europaea HOM05D006779 ORTHO05D008491 8.2e-83 312.4 255 66.7
SalBow6G0615 Salvia bowleyana HOM05D006779 ORTHO05D008491 3.1e-82 310.5 259 68.7
MSTRG.16763 Avicennia marina HOM05D006779 ORTHO05D008491 2.6e-81 307.4 263 68.8
Actinidia00459 Actinidia chinensis HOM05D006779 ORTHO05D008491 8.8e-77 292.4 259 63.7
CSS0011815 Camellia sinensis var. sinensis HOM05D000591 ORTHO05D000579 4.1e-74 283.5 275 60.4
Dinv23582 Davidia involucrata HOM05D006779 ORTHO05D008491 1.0e-72 278.9 260 63.5
Nitab4.5_0004334g0110 Nicotiana tabacum HOM05D006779 ORTHO05D008491 1.7e-72 278.1 267 60.3
Dinv42131 Davidia involucrata HOM05D006779 ORTHO05D008491 3.8e-72 276.9 262 61.5
unitig_60.g25783 Utricularia gibba HOM05D006779 ORTHO05D008491 8.0e-70 269.2 253 61.3
Cc02_g18560 Coffea canephora HOM05D006779 ORTHO05D008491 1.5e-68 265.0 264 58.3
vmacro02181 Vaccinium macrocarpon HOM05D006779 ORTHO05D008491 3.4e-68 263.8 298 54.7
Lj5C207T4 Lonicera japonica HOM05D006779 ORTHO05D008491 2.2e-67 261.2 253 61.3
Rhsim11G0168500 Rhododendron simsii HOM05D006779 ORTHO05D008491 6.3e-67 259.6 291 54.6
Haze_01903 Corylus avellana HOM05D006779 ORTHO05D008491 3.5e-65 253.8 262 58.0
PGSC0003DMG400025811 Solanum tuberosum HOM05D006779 ORTHO05D008491 2.9e-64 250.8 257 56.4
Sopen01g050660 Solanum pennellii HOM05D006779 ORTHO05D008491 3.8e-64 250.4 257 56.4
Solyc01g108430.3 Solanum lycopersicum HOM05D006779 ORTHO05D008491 5.0e-64 250.0 257 56.4
Eucgr.I01169 Eucalyptus grandis HOM05D006779 ORTHO05D008491 1.9e-63 248.1 260 58.1
GSVIVG01031784001 Vitis vinifera HOM05D006779 ORTHO05D008491 2.5e-63 247.7 261 57.5
PGR142G0644 Punica granatum HOM05D006779 ORTHO05D008491 4.2e-63 246.9 261 57.9
QL11p037315 Quercus lobata HOM05D006779 ORTHO05D008491 7.2e-63 246.1 262 57.6
Nitab4.5_0005583g0020 Nicotiana tabacum HOM05D006779 ORTHO05D008491 3.6e-62 243.8 261 55.2
FvH4_2g06680 Fragaria vesca HOM05D006779 ORTHO05D008491 1.8e-61 241.5 262 55.0
Sed0011670 Sechium edule HOM05D006779 ORTHO05D008491 2.3e-61 241.1 261 55.6
FAN24G0787 Fragaria x ananassa HOM05D006779 ORTHO05D008491 4.0e-61 240.4 262 54.6
CiPaw.05G054000 Carya illinoinensis HOM05D006779 ORTHO05D008491 6.8e-61 239.6 262 55.7
FAN20G2937 Fragaria x ananassa HOM05D006779 ORTHO05D008491 6.8e-61 239.6 262 54.6
Peaxi162Scf00016g01637 Petunia axillaris HOM05D006779 ORTHO05D008491 1.2e-60 238.8 246 57.3
FAN15G3147 Fragaria x ananassa HOM05D006779 ORTHO05D008491 1.5e-60 238.4 262 54.2
CsaV3_7G008730 Cucumis sativus L. HOM05D006779 ORTHO05D008491 2.9e-59 234.2 261 55.2
Prupe.8G119200 Prunus persica HOM05D006779 ORTHO05D008491 2.9e-59 234.2 262 55.3
Manes.15G142500 Manihot esculenta HOM05D006779 ORTHO05D008491 6.3e-59 233.0 263 55.9
Thecc.02G097400 Theobroma cacao HOM05D006779 ORTHO05D008491 1.1e-58 232.3 260 54.2
Nn5g30192 Nelumbo nucifera HOM05D006779 ORTHO05D008491 1.4e-58 231.9 258 56.2
RcHm_v2.0_Chr6g0258731 Rosa chinensis HOM05D006779 ORTHO05D008491 9.2e-58 229.2 262 53.1
DCAR_029018 Daucus carota HOM05D000144 ORTHO05D003364 1.2e-57 228.8 266 53.4
Phvul.007G247000 Phaseolus vulgaris HOM05D006779 ORTHO05D008491 2.7e-57 227.6 262 54.6
Sabra09G0080600 Salix brachista HOM05D006779 ORTHO05D008491 2.7e-57 227.6 264 54.5
Ciclev10029963m.g Citrus clementina HOM05D006779 ORTHO05D008491 7.8e-57 226.1 264 54.9
HPP92_004257 Vanilla planifolia HOM05D006779 ORTHO05D008491 7.8e-57 226.1 251 55.4
Gorai.005G240600 Gossypium raimondii HOM05D006779 ORTHO05D008491 1.3e-56 225.3 261 54.0
Potri.009G105500 Populus trichocarpa HOM05D006779 ORTHO05D008491 1.7e-56 224.9 262 53.4
Gohir.A03G191700 Gossypium hirsutum HOM05D006779 ORTHO05D008491 2.3e-56 224.6 261 53.6
Gohir.D02G212600 Gossypium hirsutum HOM05D006779 ORTHO05D008491 3.9e-56 223.8 261 53.6
CAN.G322.16 Capsicum annuum HOM05D006779 ORTHO05D008491 1.5e-55 221.9 255 54.1
MD05G1075500 Malus domestica HOM05D006779 ORTHO05D008491 1.9e-55 221.5 261 51.7
MBI02_g21199_MAGBIO Magnolia biondii HOM05D006779 ORTHO05D008491 2.5e-55 221.1 273 52.4
Atru.chr5.2773 Acer truncatum HOM05D006779 ORTHO05D008491 6.1e-54 216.5 265 52.1
TWI79G0004 Tripterygium wilfordii HOM05D006779 ORTHO05D008491 6.1e-54 216.5 268 53.0
Sc18g0004890 Simmondsia chinensis HOM05D006779 ORTHO05D008491 1.0e-53 215.7 260 55.0
HanXRQChr10g0303251 Helianthus annuus HOM05D006779 ORTHO05D008491 2.3e-53 214.5 251 53.8
ECA234G4762 Erigeron canadensis HOM05D006779 ORTHO05D008491 3.1e-53 214.2 252 53.6
Aqoxy6G01411 Aquilegia oxysepala HOM05D006779 ORTHO05D008491 4.0e-53 213.8 258 50.8
Lalb_Chr09g0328181 Lupinus albus HOM05D006779 ORTHO05D008491 4.0e-53 213.8 262 52.7
COL.COLO4_32686 Corchorus olitorius HOM05D006779 ORTHO05D008491 2.0e-52 211.5 260 54.2
Glyma.01G146900 Glycine max HOM05D006779 ORTHO05D008491 2.0e-52 211.5 262 52.7
Glyma.10G112900 Glycine max HOM05D006779 ORTHO05D008491 2.0e-52 211.5 262 52.7
CANSAT25G0176 Cannabis sativa HOM05D006779 ORTHO05D008491 2.6e-52 211.1 264 52.3
TWI31G0027 Tripterygium wilfordii HOM05D006779 ORTHO05D008491 7.5e-52 209.5 266 53.0
PSO541G4058 Papaver somniferum HOM05D006779 ORTHO05D008491 9.8e-52 209.1 256 50.8
Sp1g36470 Schrenkiella parvula HOM05D006779 ORTHO05D008491 3.7e-51 207.2 257 49.8
arahy.Tifrunner.gnm1.ann1.8ZG09Z Arachis hypogaea HOM05D006779 ORTHO05D008491 4.9e-51 206.8 263 51.0
Aa31LG10G4420 Aethionema arabicum HOM05D006779 ORTHO05D008491 2.4e-50 204.5 260 50.4
Psat7g121840 Pisum sativum HOM05D006779 ORTHO05D008491 3.2e-50 204.1 265 49.8
Glyma.02G159500 Glycine max HOM05D006779 ORTHO05D008491 4.1e-50 203.8 261 51.3
Thhalv10011741m.g Eutrema salsugineum HOM05D006779 ORTHO05D008491 9.2e-50 202.6 257 49.8
arahy.Tifrunner.gnm1.ann1.QJKD6Y Arachis hypogaea HOM05D006779 ORTHO05D008491 1.6e-49 201.8 263 51.0
arahy.Tifrunner.gnm1.ann1.T066AP Arachis hypogaea HOM05D006779 ORTHO05D008491 2.7e-49 201.1 261 50.6
ClCG02G005780 Citrullus lanatus HOM05D006779 ORTHO05D008491 3.5e-49 200.7 303 46.2
PSO675G5018 Papaver somniferum HOM05D006779 ORTHO05D008491 3.5e-49 200.7 256 49.6
AT1G49590 Arabidopsis thaliana HOM05D006779 ORTHO05D008491 1.0e-48 199.1 256 48.8
AUR62034187 Chenopodium quinoa HOM05D006779 ORTHO05D008491 1.3e-48 198.7 255 51.4
Ca_18655_v3 Cicer arietinum L. HOM05D006779 ORTHO05D008491 3.9e-48 197.2 261 49.0
Ah.04g152710 Amaranthus hybridus HOM05D006779 ORTHO05D008491 3.3e-47 194.1 257 51.4
EL10Ac3g06870 Beta vulgaris HOM05D006779 ORTHO05D008491 7.3e-47 193.0 272 48.9
BolC6t35591H Brassica oleracea HOM05D006779 ORTHO05D008491 1.6e-46 191.8 255 48.2
A06p03540 Brassica napus HOM05D006779 ORTHO05D008491 2.1e-46 191.4 258 47.3
BraA06t23562Z Brassica rapa HOM05D006779 ORTHO05D008491 1.4e-45 188.7 256 47.7
AUR62022456 Chenopodium quinoa HOM05D006779 ORTHO05D008491 1.2e-44 185.7 295 45.4
Lj4g0006122 Lotus japonicus HOM05D006779 ORTHO05D008491 7.5e-44 183.0 251 49.4
Carub.0001s3879 Capsella rubella HOM05D006779 ORTHO05D008491 4.9e-43 180.3 257 47.5
AL1G56960 Arabidopsis lyrata HOM05D006779 ORTHO05D008491 2.4e-42 177.9 264 45.1
CDE06G1966 Ceratophyllum demersum HOM05D006779 ORTHO05D008491 3.2e-42 177.6 250 48.8
BcaNung06359 Brassica carinata HOM05D006779 ORTHO05D008491 7.1e-42 176.4 256 44.5
Medtr4g086640 Medicago truncatula HOM05D006779 ORTHO05D008491 4.6e-41 173.7 258 47.3
Hund00325 Selenicereus undatus HOM05D006779 ORTHO05D008491 1.0e-40 172.6 262 46.9
MELO3C018438.2 Cucumis melo HOM05D006779 ORTHO05D008491 4.4e-36 157.1 215 50.2
Zm00001eb373090 Zea mays HOM05D006779 ORTHO05D008491 7.6e-36 156.4 261 44.8
SHI05379 Sapria himalayana HOM05D006779 ORTHO05D008491 9.9e-36 156.0 263 43.0
Mapoly0157s0003 Marchantia polymorpha HOM05D006779 ORTHO05D008491 5.4e-34 150.2 297 37.4
CSS0024784 Camellia sinensis var. sinensis HOM05D006779 ORTHO05D008491 1.0e-32 146.0 183 51.9
ATR0097G032 Amborella trichopoda HOM05D006779 ORTHO05D008491 3.0e-32 144.4 241 42.3
HPP92_004235 Vanilla planifolia HOM05D006779 ORTHO05D008491 8.6e-32 142.9 205 50.7
CSS0021002 Camellia sinensis var. sinensis HOM05D006779 ORTHO05D008491 2.8e-30 137.9 183 50.3
TAR628G0388 Trochodendron aralioides HOM05D006779 ORTHO05D008491 2.4e-29 134.8 115 60.9
C06p04620 Brassica napus HOM05D006779 ORTHO05D008491 5.8e-28 130.2 212 45.3
SMO367G0139 Selaginella moellendorffii HOM05D006779 ORTHO05D008491 2.9e-27 127.9 279 34.8
Cpa.g.sc62.36 Carica papaya HOM05D006779 ORTHO05D008491 8.4e-27 126.3 102 60.8
Pp3c14_26080 Physcomitrium patens HOM05D006779 ORTHO05D008491 4.2e-26 124.0 291 35.7
FAN20G1913 Fragaria x ananassa HOM05D006779 ORTHO05D008491 3.9e-24 117.5 150 50.0
AagrBONN_evm.TU.Sc2ySwM_344.4302 Anthoceros agrestis HOM05D006779 ORTHO05D008491 1.9e-23 115.2 246 35.8
CSS0022737 Camellia sinensis var. sinensis HOM05D006779 ORTHO05D008491 6.9e-21 106.7 178 45.5
TPR.G23511 Trifolium pratense HOM05D006779 ORTHO05D008491 7.6e-20 103.2 70 70.0
CARHR039640 Cardamine hirsuta HOM05D006779 ORTHO05D008491 4.9e-19 100.5 146 48.6
Os06g0215200 Oryza sativa ssp. japonica HOM05D006779 ORTHO05D008491 1.9e-18 98.6 70 67.1
CSS0034996 Camellia sinensis var. sinensis HOM05D006779 ORTHO05D008491 3.2e-18 97.8 183 42.1
CBR_g17671 Chara braunii HOM05D006779 ORTHO05D008491 3.2e-18 97.8 213 33.8
CDE03G0027 Ceratophyllum demersum HOM05D006779 ORTHO05D008491 1.2e-17 95.9 250 38.0
TPR.G23531 Trifolium pratense HOM05D006779 ORTHO05D008491 1.3e-16 92.4 145 44.8
CSS0005405 Camellia sinensis var. sinensis HOM05D006779 ORTHO05D008491 3.9e-16 90.9 141 46.8
CSS0011003 Camellia sinensis var. sinensis HOM05D006779 ORTHO05D008491 3.9e-16 90.9 141 46.8
AUR62042088 Chenopodium quinoa HOM05D006779 ORTHO05D008491 2.8e-14 84.7 200 37.0
EL10Ac9g20940 Beta vulgaris HOM05D002686 ORTHO05D003222 2.5e-07 61.6 85 49.4
TAR628G1516 Trochodendron aralioides HOM05D006779 ORTHO05D008491 1.6e-06 58.9 120 45.0


User provided reference genes

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