Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold75G25007 Striga asiatica HOM05D005175 ORTHO05D006302 9.9e-71 270.0 137 100.0
SalBow4G1104 Salvia bowleyana HOM05D005175 ORTHO05D006302 2.7e-44 182.2 187 52.9
Migut.A00211 Erythranthe guttata HOM05D005175 ORTHO05D006302 3.3e-42 175.3 236 44.9
MSTRG.11700 Avicennia marina HOM05D005175 ORTHO05D006302 1.1e-40 170.2 236 44.1
Hund19520 Selenicereus undatus HOM05D005175 ORTHO05D006302 1.7e-33 146.4 185 45.4
Dinv27896 Davidia involucrata HOM05D005175 ORTHO05D006302 8.5e-30 134.0 106 66.0
CSS0003070 Camellia sinensis var. sinensis HOM05D005175 ORTHO05D006302 1.1e-29 133.7 118 61.0
Gohir.D13G193000 Gossypium hirsutum HOM05D005175 ORTHO05D006302 1.1e-29 133.7 237 36.3
CSS0010535 Camellia sinensis var. sinensis HOM05D005175 ORTHO05D006302 1.4e-29 133.3 118 61.0
AUR62009295 Chenopodium quinoa HOM05D005175 ORTHO05D006302 2.5e-29 132.5 201 40.8
Gohir.A13G186200 Gossypium hirsutum HOM05D005175 ORTHO05D006302 3.2e-29 132.1 237 36.3
Peaxi162Scf00227g00213 Petunia axillaris HOM05D005175 ORTHO05D006302 3.2e-29 132.1 111 61.3
Hma1.2p1_0049F.1_g028680 Hydrangea macrophylla HOM05D005175 ORTHO05D006302 4.2e-29 131.7 106 64.2
CAN.G1674.2 Capsicum annuum HOM05D005175 ORTHO05D006302 9.4e-29 130.6 234 36.8
Dinv14260 Davidia involucrata HOM05D005175 ORTHO05D006302 9.4e-29 130.6 114 60.5
Eucgr.C02924 Eucalyptus grandis HOM05D005175 ORTHO05D006302 9.4e-29 130.6 116 57.8
Solyc08g066700.3 Solanum lycopersicum HOM05D005175 ORTHO05D006302 1.6e-28 129.8 232 35.8
GSVIVG01035631001 Vitis vinifera HOM05D005175 ORTHO05D006302 1.6e-28 129.8 115 58.3
PGSC0003DMG400004310 Solanum tuberosum HOM05D005175 ORTHO05D006302 2.1e-28 129.4 234 35.9
MELO3C011145.2 Cucumis melo HOM05D005175 ORTHO05D006302 2.7e-28 129.0 116 57.8
CsaV3_2G030910 Cucumis sativus L. HOM05D005175 ORTHO05D006302 3.6e-28 128.6 114 58.8
Gorai.013G218900 Gossypium raimondii HOM05D005175 ORTHO05D006302 3.6e-28 128.6 238 35.7
ClCG08G012270 Citrullus lanatus HOM05D005175 ORTHO05D006302 4.7e-28 128.3 114 59.6
Potri.018G043600 Populus trichocarpa HOM05D005175 ORTHO05D006302 4.7e-28 128.3 114 57.9
Sabra18G0043700 Salix brachista HOM05D005175 ORTHO05D006302 4.7e-28 128.3 114 57.9
Atru.chr7.2095 Acer truncatum HOM05D005175 ORTHO05D006302 6.1e-28 127.9 116 56.9
Atru.chr7.2109 Acer truncatum HOM05D005175 ORTHO05D006302 6.1e-28 127.9 116 56.9
ECA248G2598 Erigeron canadensis HOM05D005175 ORTHO05D006302 6.1e-28 127.9 114 59.6
Sed0006550 Sechium edule HOM05D005175 ORTHO05D006302 6.1e-28 127.9 114 58.8
Aqoxy4G02391 Aquilegia oxysepala HOM05D005175 ORTHO05D006302 1.4e-27 126.7 139 49.6
Rhsim02G0179100 Rhododendron simsii HOM05D005175 ORTHO05D006302 2.3e-27 125.9 115 58.3
Lj8C586G3 Lonicera japonica HOM05D005175 ORTHO05D006302 3.0e-27 125.6 117 56.4
Nn7g37002 Nelumbo nucifera HOM05D005175 ORTHO05D006302 3.0e-27 125.6 114 56.1
RcHm_v2.0_Chr6g0306141 Rosa chinensis HOM05D005175 ORTHO05D006302 3.0e-27 125.6 112 59.8
CiPaw.11G052500 Carya illinoinensis HOM05D005175 ORTHO05D006302 5.2e-27 124.8 236 36.0
Ciclev10009310m.g Citrus clementina HOM05D005175 ORTHO05D006302 6.7e-27 124.4 114 57.9
Lj8C577G3 Lonicera japonica HOM05D005175 ORTHO05D006302 1.5e-26 123.2 117 55.6
FvH4_2g35660 Fragaria vesca HOM05D005175 ORTHO05D006302 2.0e-26 122.9 112 58.0
AUR62041709 Chenopodium quinoa HOM05D005175 ORTHO05D006302 2.6e-26 122.5 217 38.2
THA.LOC104814772 Tarenaya hassleriana HOM05D005175 ORTHO05D006302 2.6e-26 122.5 232 35.8
AT3G46210 Arabidopsis thaliana HOM05D005175 ORTHO05D006302 3.3e-26 122.1 117 53.0
Thecc.09G044300 Theobroma cacao HOM05D005175 ORTHO05D006302 3.3e-26 122.1 107 54.2
TWI32G0813 Tripterygium wilfordii HOM05D005175 ORTHO05D006302 4.4e-26 121.7 114 56.1
AUR62043392 Chenopodium quinoa HOM05D005175 ORTHO05D006302 7.4e-26 120.9 221 37.6
Manes.01G107300 Manihot esculenta HOM05D005175 ORTHO05D006302 7.4e-26 120.9 114 54.4
QL12p029089 Quercus lobata HOM05D005175 ORTHO05D006302 7.4e-26 120.9 114 55.3
TAR626G1708 Trochodendron aralioides HOM05D005175 ORTHO05D006302 7.4e-26 120.9 114 56.1
TAR636G0460 Trochodendron aralioides HOM05D005175 ORTHO05D006302 7.4e-26 120.9 114 56.1
Nitab4.5_0007810g0010 Nicotiana tabacum HOM05D005175 ORTHO05D006302 9.7e-26 120.6 227 37.0
MD01G1039900 Malus domestica HOM05D005175 ORTHO05D006302 1.3e-25 120.2 116 56.0
Thhalv10002814m.g Eutrema salsugineum HOM05D005175 ORTHO05D006302 1.7e-25 119.8 110 54.5
AL5G25000 Arabidopsis lyrata HOM05D005175 ORTHO05D006302 2.2e-25 119.4 117 52.1
Lalb_Chr08g0233831 Lupinus albus HOM05D005175 ORTHO05D006302 2.8e-25 119.0 116 52.6
COL.COLO4_20965 Corchorus olitorius HOM05D005175 ORTHO05D006302 3.7e-25 118.6 104 56.7
HanXRQChr01g0029811 Helianthus annuus HOM05D005175 ORTHO05D006302 3.7e-25 118.6 115 53.9
Lsat_1_v5_gn_1_47181 Lactuca sativa HOM05D005175 ORTHO05D006302 3.7e-25 118.6 112 53.6
CANSAT11G2394 Cannabis sativa HOM05D005175 ORTHO05D006302 4.8e-25 118.2 114 57.0
BcaC01g01925 Brassica carinata HOM05D005175 ORTHO05D006302 8.2e-25 117.5 108 54.6
A06p20990 Brassica napus HOM05D005175 ORTHO05D006302 8.2e-25 117.5 108 55.6
Carub.0005s1205 Capsella rubella HOM05D005175 ORTHO05D006302 8.2e-25 117.5 112 53.6
Duzib150G1530 Durio zibethinus HOM05D005175 ORTHO05D006302 8.2e-25 117.5 238 34.5
C03p70530 Brassica napus HOM05D005175 ORTHO05D006302 1.1e-24 117.1 108 53.7
BraA06t25187Z Brassica rapa HOM05D005175 ORTHO05D006302 1.1e-24 117.1 108 54.6
CARHR154650 Cardamine hirsuta HOM05D005175 ORTHO05D006302 1.1e-24 117.1 232 33.6
Potri.006G239100 Populus trichocarpa HOM05D005175 ORTHO05D006302 1.1e-24 117.1 116 55.2
BolC3t19335H Brassica oleracea HOM05D005175 ORTHO05D006302 1.4e-24 116.7 108 53.7
Haze_21802 Corylus avellana HOM05D005175 ORTHO05D006302 1.8e-24 116.3 124 50.0
PSO566G0264 Papaver somniferum HOM05D005175 ORTHO05D006302 1.8e-24 116.3 115 52.2
Cc08_g09460 Coffea canephora HOM05D005175 ORTHO05D006302 2.4e-24 115.9 104 56.7
Nitab4.5_0007838g0040 Nicotiana tabacum HOM05D005175 ORTHO05D006302 3.1e-24 115.5 227 35.7
Ah.15g099330 Amaranthus hybridus HOM05D005175 ORTHO05D006302 4.1e-24 115.2 112 53.6
Medtr7g076910 Medicago truncatula HOM05D005175 ORTHO05D006302 4.1e-24 115.2 116 52.6
TPR.G26940 Trifolium pratense HOM05D005175 ORTHO05D006302 4.1e-24 115.2 116 52.6
arahy.Tifrunner.gnm1.ann1.WUZH4U Arachis hypogaea HOM05D005175 ORTHO05D006302 5.3e-24 114.8 116 52.6
Cfa013314 Carpinus fangiana HOM05D005175 ORTHO05D006302 5.3e-24 114.8 114 52.6
Ca_07899_v3 Cicer arietinum L. HOM05D005175 ORTHO05D006302 5.3e-24 114.8 116 53.4
PGR044G2490 Punica granatum HOM05D005175 ORTHO05D006302 5.3e-24 114.8 114 50.0
Sp5g15420 Schrenkiella parvula HOM05D005175 ORTHO05D006302 5.3e-24 114.8 112 53.6
Glyma.18G230900 Glycine max HOM05D005175 ORTHO05D006302 9.1e-24 114.0 116 50.9
MD15G1311800 Malus domestica HOM05D005175 ORTHO05D006302 9.1e-24 114.0 116 55.2
EL10Ac2g04031 Beta vulgaris HOM05D005175 ORTHO05D006302 1.2e-23 113.6 113 53.1
Lj2g0027256 Lotus japonicus HOM05D005175 ORTHO05D006302 2.0e-23 112.8 116 51.7
Glyma.09G261100 Glycine max HOM05D005175 ORTHO05D006302 2.6e-23 112.5 111 52.3
Phvul.008G066200 Phaseolus vulgaris HOM05D005175 ORTHO05D006302 2.6e-23 112.5 111 52.3
Psat3g109920 Pisum sativum HOM05D005175 ORTHO05D006302 2.6e-23 112.5 115 52.2
Psat3g124840 Pisum sativum HOM05D005175 ORTHO05D006302 2.6e-23 112.5 115 51.3
TAR383G0707 Trochodendron aralioides HOM05D005175 ORTHO05D006302 2.6e-23 112.5 112 51.8
CDE02G3559 Ceratophyllum demersum HOM05D005175 ORTHO05D006302 4.5e-23 111.7 131 48.1
DCAR_004475 Daucus carota HOM05D005175 ORTHO05D006302 5.9e-23 111.3 120 51.7
PSO782G3154 Papaver somniferum HOM05D005175 ORTHO05D006302 5.9e-23 111.3 115 51.3
Prupe.1G449000 Prunus persica HOM05D005175 ORTHO05D006302 1.0e-22 110.5 114 53.5
Aqoxy7G01494 Aquilegia oxysepala HOM05D005175 ORTHO05D006302 5.0e-22 108.2 110 49.1
ATR0705G208 Amborella trichopoda HOM05D005175 ORTHO05D006302 6.5e-22 107.8 115 53.9
Actinidia30274 Actinidia chinensis HOM05D005175 ORTHO05D006302 3.2e-21 105.5 114 54.4
MBI04_g27064_MAGBIO Magnolia biondii HOM05D005175 ORTHO05D006302 9.4e-21 104.0 105 56.2
Os03g0854200 Oryza sativa ssp. japonica HOM05D005175 ORTHO05D006302 4.7e-20 101.7 105 48.6
Psat0s4355g0080 Pisum sativum HOM05D005175 ORTHO05D006302 8.0e-20 100.9 177 36.7
FAN20G1449 Fragaria x ananassa HOM05D005175 ORTHO05D006302 1.0e-19 100.5 270 30.4
Zm00001eb210560 Zea mays HOM05D005175 ORTHO05D006302 1.0e-19 100.5 115 47.0
Mapoly0050s0095 Marchantia polymorpha HOM05D005175 ORTHO05D006302 1.4e-19 100.1 112 44.6
HPP92_018407 Vanilla planifolia HOM05D005175 ORTHO05D006302 1.4e-19 100.1 116 49.1
Aa31LG4G15310 Aethionema arabicum HOM05D005175 ORTHO05D006302 2.3e-19 99.4 93 52.7
SEGI_05611 Sequoiadendron giganteum HOM05D005175 ORTHO05D006302 7.5e-18 94.4 104 43.3
vmacro11061 Vaccinium macrocarpon HOM05D005175 ORTHO05D006302 2.2e-17 92.8 85 58.8
AagrBONN_evm.TU.Sc2ySwM_228.4701 Anthoceros agrestis HOM05D005175 ORTHO05D006302 2.8e-17 92.4 118 44.1
Pp3c4_10290 Physcomitrium patens HOM05D005175 ORTHO05D006302 2.8e-17 92.4 127 40.9
Duzib168G0626 Durio zibethinus HOM05D005175 ORTHO05D006302 3.7e-17 92.0 224 30.8
Sc09g0009230 Simmondsia chinensis HOM05D005175 ORTHO05D006302 3.7e-17 92.0 84 58.3
Gorai.010G107600 Gossypium raimondii HOM05D005175 ORTHO05D006302 4.7e-12 75.1 103 41.7
Glyma.17G169500 Glycine max HOM05D005175 ORTHO05D006302 1.2e-10 70.5 61 59.0
Psat0s4355g0120 Pisum sativum HOM05D005175 ORTHO05D006302 2.6e-10 69.3 85 49.4
CBR_g16978 Chara braunii HOM05D005175 ORTHO05D006302 5.7e-10 68.2 106 36.8
AagrBONN_evm.TU.Sc2ySwM_369.362 Anthoceros agrestis HOM05D005175 ORTHO05D006302 2.2e-09 66.2 91 42.9
Thhalv10002689m.g Eutrema salsugineum HOM05D005175 ORTHO05D006302 4.1e-08 62.0 44 61.4
Hma1.2p1_0049F.1_g028690 Hydrangea macrophylla HOM05D005175 ORTHO05D006302 4.1e-08 62.0 42 69.0
Hma1.2p1_0774F.1_g216360 Hydrangea macrophylla HOM05D005175 ORTHO05D006302 7.0e-08 61.2 42 69.0
Hma1.2p1_0049F.1_g028670 Hydrangea macrophylla HOM05D005175 ORTHO05D006302 1.0e-06 57.4 33 75.8
SalBow3G2467 Salvia bowleyana HOM05D000552 ORTHO05D006302 2.9e-06 55.8 49 59.2
SalBow4G2242 Salvia bowleyana HOM05D000552 ORTHO05D006302 2.9e-06 55.8 49 59.2
Gohir.D06G093150 Gossypium hirsutum HOM05D005175 ORTHO05D006302 8.6e-06 54.3 43 55.8


User provided reference genes

Program Settings