Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold74G24562 Striga asiatica HOM05D005565 ORTHO05D401758 2.0e-167 592.4 313 100.0
SGA_v2.0_scaffold273G46430 Striga asiatica HOM05D005565 ORTHO05D402892 7.8e-71 271.6 190 80.5
SGA_v2.0_scaffold1G00240 Striga asiatica HOM05D005565 ORTHO05D006950 1.6e-15 87.8 51 88.2
Oeu041100.1 Olea europaea HOM05D005565 ORTHO05D006950 1.0e-14 85.1 82 61.0
SGA_v2.0_scaffold223G42860 Striga asiatica HOM05D005565 ORTHO05D006950 1.0e-14 85.1 82 62.2
Oeu015183.1 Olea europaea HOM05D005565 ORTHO05D006950 3.0e-14 83.6 82 59.8
unitig_21.g20207 Utricularia gibba HOM05D003481 ORTHO05D004001 5.1e-14 82.8 51 82.4
Migut.H01333 Erythranthe guttata HOM05D005565 ORTHO05D006950 8.8e-14 82.0 82 61.0
MSTRG.14795 Avicennia marina HOM05D005565 ORTHO05D006950 2.0e-13 80.9 82 58.5
VMungo0251G3128 Vigna mungo HOM05D005565 ORTHO05D006950 3.3e-13 80.1 117 46.2
Gohir.A10G003700 Gossypium hirsutum HOM05D005565 ORTHO05D006950 5.7e-13 79.3 119 47.9
Gohir.D10G003700 Gossypium hirsutum HOM05D005565 ORTHO05D006950 5.7e-13 79.3 119 47.9
Gorai.011G004100 Gossypium raimondii HOM05D005565 ORTHO05D006950 5.7e-13 79.3 119 47.9
Lj4g0020694 Lotus japonicus HOM05D005565 ORTHO05D006950 1.3e-12 78.2 84 56.0
Duzib192G0128 Durio zibethinus HOM05D005565 ORTHO05D006950 2.8e-12 77.0 118 47.5
Thecc.06G001100 Theobroma cacao HOM05D005565 ORTHO05D006950 3.7e-12 76.6 117 47.0
Manes.06G055100 Manihot esculenta HOM05D005565 ORTHO05D006950 4.8e-12 76.3 117 47.0
COL.COLO4_26828 Corchorus olitorius HOM05D005565 ORTHO05D006950 6.3e-12 75.9 118 46.6
Dinv06439 Davidia involucrata HOM05D005565 ORTHO05D006950 6.3e-12 75.9 119 48.7
Lj1A1162G46 Lonicera japonica HOM05D005565 ORTHO05D006950 8.2e-12 75.5 84 57.1
Sabra11G0084800 Salix brachista HOM05D005565 ORTHO05D006950 8.2e-12 75.5 82 59.8
Sabra11G0091000 Salix brachista HOM05D005565 ORTHO05D006950 8.2e-12 75.5 82 59.8
Sabra16G0245100 Salix brachista HOM05D005565 ORTHO05D006950 8.2e-12 75.5 147 45.6
DCAR_027864 Daucus carota HOM05D005565 ORTHO05D006950 1.1e-11 75.1 100 51.0
Phvul.002G100900 Phaseolus vulgaris HOM05D005565 ORTHO05D006950 1.4e-11 74.7 117 44.4
Glyma.07G224200 Glycine max HOM05D005565 ORTHO05D006950 1.8e-11 74.3 87 55.2
Aqoxy1G01543 Aquilegia oxysepala HOM05D005565 ORTHO05D006950 4.1e-11 73.2 84 52.4
Dinv23083 Davidia involucrata HOM05D005565 ORTHO05D006950 4.1e-11 73.2 84 57.1
ECA240G3173 Erigeron canadensis HOM05D005565 ORTHO05D006950 4.1e-11 73.2 55 72.7
FAN16G1178 Fragaria x ananassa HOM05D005565 ORTHO05D006950 4.1e-11 73.2 122 44.3
FAN21G3355 Fragaria x ananassa HOM05D005565 ORTHO05D006950 4.1e-11 73.2 122 44.3
Hma1.2p1_0333F.1_g128300 Hydrangea macrophylla HOM05D005565 ORTHO05D006950 4.1e-11 73.2 86 55.8
Haze_05807 Corylus avellana HOM05D005565 ORTHO05D006950 5.3e-11 72.8 119 48.7
QL05p061027 Quercus lobata HOM05D005565 ORTHO05D006950 5.3e-11 72.8 118 44.9
Atru.chr10.872 Acer truncatum HOM05D005565 ORTHO05D006950 6.9e-11 72.4 82 57.3
Glyma.20G024100 Glycine max HOM05D005565 ORTHO05D006950 6.9e-11 72.4 106 47.2
CiPaw.10G085900 Carya illinoinensis HOM05D005565 ORTHO05D006950 9.1e-11 72.0 119 48.7
Potri.011G098100 Populus trichocarpa HOM05D005565 ORTHO05D006950 9.1e-11 72.0 82 57.3
arahy.Tifrunner.gnm1.ann1.V3UUHR Arachis hypogaea HOM05D005565 ORTHO05D006950 1.2e-10 71.6 103 47.6
Cpa.g.sc17.91 Carica papaya HOM05D005565 ORTHO05D006950 1.2e-10 71.6 82 57.3
MELO3C007079.2 Cucumis melo HOM05D005565 ORTHO05D006950 1.2e-10 71.6 120 45.0
CsaV3_6G052300 Cucumis sativus L. HOM05D005565 ORTHO05D006950 1.2e-10 71.6 117 46.2
Nn3g20239 Nelumbo nucifera HOM05D005565 ORTHO05D006950 1.2e-10 71.6 84 56.0
TWI53G0754 Tripterygium wilfordii HOM05D005565 ORTHO05D006950 1.2e-10 71.6 117 45.3
GSVIVG01021628001 Vitis vinifera HOM05D005565 ORTHO05D006950 1.2e-10 71.6 53 71.7
Eucgr.D00186 Eucalyptus grandis HOM05D005565 ORTHO05D006950 1.5e-10 71.2 82 56.1
THA.LOC104812687 Tarenaya hassleriana HOM05D005565 ORTHO05D006950 1.5e-10 71.2 119 45.4
arahy.Tifrunner.gnm1.ann1.59WFQY Arachis hypogaea HOM05D005565 ORTHO05D006950 2.0e-10 70.9 103 47.6
Cfa000824 Carpinus fangiana HOM05D005565 ORTHO05D006950 2.0e-10 70.9 138 42.0
MD10G1253700 Malus domestica HOM05D005565 ORTHO05D006950 2.0e-10 70.9 133 45.1
Medtr4g083380 Medicago truncatula HOM05D005565 ORTHO05D006950 2.0e-10 70.9 53 69.8
Psat7g132960 Pisum sativum HOM05D005565 ORTHO05D006950 2.0e-10 70.9 86 53.5
ClCG01G025100 Citrullus lanatus HOM05D005565 ORTHO05D006950 2.6e-10 70.5 117 45.3
FvH4_3g10030 Fragaria vesca HOM05D005565 ORTHO05D006950 2.6e-10 70.5 122 43.4
FAN11G0475 Fragaria x ananassa HOM05D005565 ORTHO05D006950 2.6e-10 70.5 122 43.4
Lsat_1_v5_gn_1_117781 Lactuca sativa HOM05D005565 ORTHO05D006950 2.6e-10 70.5 105 44.8
Manes.14G122600 Manihot esculenta HOM05D005565 ORTHO05D006950 2.6e-10 70.5 119 43.7
CSS0026797 Camellia sinensis var. sinensis HOM05D005565 ORTHO05D006950 3.4e-10 70.1 117 44.4
CANSAT35G0106 Cannabis sativa HOM05D005565 ORTHO05D006950 3.4e-10 70.1 119 45.4
CANSAT35G0536 Cannabis sativa HOM05D005565 ORTHO05D006950 3.4e-10 70.1 119 45.4
SHI20681 Sapria himalayana HOM05D005565 ORTHO05D006950 4.5e-10 69.7 117 44.4
Cc09_g08070 Coffea canephora HOM05D005565 ORTHO05D006950 5.9e-10 69.3 58 65.5
Potri.001G372600 Populus trichocarpa HOM05D005565 ORTHO05D006950 5.9e-10 69.3 118 49.2
Prupe.4G089800 Prunus persica HOM05D005565 ORTHO05D006950 5.9e-10 69.3 84 54.8
Sc17g0004650 Simmondsia chinensis HOM05D005565 ORTHO05D006950 5.9e-10 69.3 93 51.6
Aa31LG6G11740 Aethionema arabicum HOM05D005565 ORTHO05D006950 7.7e-10 68.9 53 69.8
AL1G44510 Arabidopsis lyrata HOM05D005565 ORTHO05D006950 7.7e-10 68.9 56 66.1
Ca_18788_v3 Cicer arietinum L. HOM05D005565 ORTHO05D006950 7.7e-10 68.9 82 54.9
Actinidia13472 Actinidia chinensis HOM05D005565 ORTHO05D006950 1.0e-09 68.6 121 44.6
PSO541G0264 Papaver somniferum HOM05D005565 ORTHO05D006950 1.0e-09 68.6 84 50.0
PSO675G3222 Papaver somniferum HOM05D005565 ORTHO05D006950 1.0e-09 68.6 84 50.0
PGR083G1318 Punica granatum HOM05D005565 ORTHO05D006950 1.0e-09 68.6 84 53.6
ATR0165G027 Amborella trichopoda HOM05D005565 ORTHO05D006950 1.3e-09 68.2 85 52.9
MBI10_g00722_MAGBIO Magnolia biondii HOM05D005565 ORTHO05D006950 1.7e-09 67.8 84 50.0
MD05G1274000 Malus domestica HOM05D005565 ORTHO05D006950 1.7e-09 67.8 133 43.6
Os01g0526100 Oryza sativa ssp. japonica HOM05D005565 ORTHO05D006950 1.7e-09 67.8 82 54.9
RcHm_v2.0_Chr5g0015891 Rosa chinensis HOM05D005565 ORTHO05D006950 1.7e-09 67.8 122 42.6
Sp1g26320 Schrenkiella parvula HOM05D005565 ORTHO05D006950 2.2e-09 67.4 54 66.7
TAR626G1362 Trochodendron aralioides HOM05D005565 ORTHO05D006950 2.9e-09 67.0 84 48.8
CARHR029890 Cardamine hirsuta HOM05D005565 ORTHO05D006950 5.0e-09 66.2 119 42.0
HPP92_019891 Vanilla planifolia HOM05D005565 ORTHO05D006950 5.0e-09 66.2 82 53.7
BcaNung05265 Brassica carinata HOM05D005565 ORTHO05D006950 6.5e-09 65.9 51 64.7
A08p24410 Brassica napus HOM05D005565 ORTHO05D006950 6.5e-09 65.9 51 68.6
C03p76800 Brassica napus HOM05D005565 ORTHO05D006950 6.5e-09 65.9 51 68.6
BraA08t34396Z Brassica rapa HOM05D005565 ORTHO05D006950 6.5e-09 65.9 51 68.6
Thhalv10007861m.g Eutrema salsugineum HOM05D005565 ORTHO05D006950 6.5e-09 65.9 120 40.8
MBI18_g10581_MAGBIO Magnolia biondii HOM05D005565 ORTHO05D006950 6.5e-09 65.9 84 48.8
SEGI_17605 Sequoiadendron giganteum HOM05D005565 ORTHO05D006950 6.5e-09 65.9 85 51.8
AagrBONN_evm.TU.Sc2ySwM_228.4814 Anthoceros agrestis HOM05D005565 ORTHO05D006950 8.5e-09 65.5 54 64.8
A09p35980 Brassica napus HOM05D005565 ORTHO05D006950 8.5e-09 65.5 51 68.6
BraA09t39122Z Brassica rapa HOM05D005565 ORTHO05D006950 8.5e-09 65.5 51 68.6
AT1G30480 Arabidopsis thaliana HOM05D005565 ORTHO05D006950 1.1e-08 65.1 57 63.2
Carub.0001s2870 Capsella rubella HOM05D005565 ORTHO05D006950 1.1e-08 65.1 124 43.5
EL10Ac8g19576 Beta vulgaris HOM05D005565 ORTHO05D006950 1.4e-08 64.7 90 50.0
BcaB07g32657 Brassica carinata HOM05D005565 ORTHO05D006950 1.4e-08 64.7 51 68.6
BcaB07g32683 Brassica carinata HOM05D005565 ORTHO05D006950 1.4e-08 64.7 51 68.6
C05p29480 Brassica napus HOM05D005565 ORTHO05D006950 1.4e-08 64.7 51 68.6
BolC5t31678H Brassica oleracea HOM05D005565 ORTHO05D006950 1.4e-08 64.7 51 68.6
CAN.G954.26 Capsicum annuum HOM05D005565 ORTHO05D006950 1.9e-08 64.3 86 52.3
FAN25G2018 Fragaria x ananassa HOM05D005565 ORTHO05D006950 1.9e-08 64.3 52 65.4
Sed0002078 Sechium edule HOM05D005565 ORTHO05D006950 1.9e-08 64.3 117 43.6
BcaNung05264 Brassica carinata HOM05D005565 ORTHO05D006950 3.2e-08 63.5 51 66.7
BolC3t19934H Brassica oleracea HOM05D005565 ORTHO05D006950 3.2e-08 63.5 51 66.7
Zm00001eb315350 Zea mays HOM05D005565 ORTHO05D006950 3.2e-08 63.5 83 51.8
Zm00001eb376390 Zea mays HOM05D005565 ORTHO05D006950 3.2e-08 63.5 83 51.8
CDE10G1222 Ceratophyllum demersum HOM05D005565 ORTHO05D006950 9.4e-08 62.0 51 64.7
Pp3c2_18610 Physcomitrium patens HOM05D005565 ORTHO05D006950 2.1e-07 60.8 60 56.7
Rhsim13G0120300 Rhododendron simsii HOM05D005565 ORTHO05D006950 2.7e-07 60.5 82 54.9
SMO351G0200 Selaginella moellendorffii HOM05D005565 ORTHO05D006950 3.6e-07 60.1 53 66.0
vmacro03395 Vaccinium macrocarpon HOM05D005565 ORTHO05D006950 1.0e-06 58.5 85 51.8
vmacro03441 Vaccinium macrocarpon HOM05D005565 ORTHO05D006950 1.0e-06 58.5 85 51.8
PGSC0003DMG400021191 Solanum tuberosum HOM05D005565 ORTHO05D006950 1.4e-06 58.2 93 46.2
Nitab4.5_0004596g0030 Nicotiana tabacum HOM05D005565 ORTHO05D006950 1.8e-06 57.8 91 46.2
HanXRQChr01g0003371 Helianthus annuus HOM05D005565 ORTHO05D006950 2.3e-06 57.4 62 53.2
Mapoly0023s0048 Marchantia polymorpha HOM05D005565 ORTHO05D006950 2.3e-06 57.4 103 42.7
Sopen02g018950 Solanum pennellii HOM05D005565 ORTHO05D006950 3.0e-06 57.0 96 44.8
BcaC01g00198 Brassica carinata HOM05D005565 ORTHO05D006950 5.1e-06 56.2 46 65.2
Solyc02g069790.3 Solanum lycopersicum HOM05D005565 ORTHO05D006950 5.1e-06 56.2 98 43.9


User provided reference genes

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