Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold73G24514 Striga asiatica HOM05D005707 ORTHO05D007276 0.0e+00 1843.6 949 100.0
MSTRG.14925 Avicennia marina HOM05D005707 ORTHO05D007276 0.0e+00 1580.5 963 81.9
Migut.M00030 Erythranthe guttata HOM05D005707 ORTHO05D007276 0.0e+00 1561.6 959 81.6
Oeu040469.1 Olea europaea HOM05D005707 ORTHO05D007276 0.0e+00 1503.8 945 78.9
Cfa007084 Carpinus fangiana HOM05D005707 ORTHO05D007276 0.0e+00 1487.2 940 78.6
Haze_03608 Corylus avellana HOM05D005707 ORTHO05D007276 0.0e+00 1483.0 958 77.1
Dinv07863 Davidia involucrata HOM05D005707 ORTHO05D007276 0.0e+00 1480.3 961 76.7
PGR142G3494 Punica granatum HOM05D005707 ORTHO05D007276 0.0e+00 1469.1 943 77.5
CiPaw.07G002400 Carya illinoinensis HOM05D005707 ORTHO05D007276 0.0e+00 1467.6 956 76.6
Prupe.3G200600 Prunus persica HOM05D005707 ORTHO05D007276 0.0e+00 1465.7 945 77.2
Manes.13G062700 Manihot esculenta HOM05D005707 ORTHO05D007276 0.0e+00 1464.5 959 75.9
Gohir.D11G156360 Gossypium hirsutum HOM05D005707 ORTHO05D007276 0.0e+00 1461.8 952 76.1
Gorai.007G166700 Gossypium raimondii HOM05D005707 ORTHO05D007276 0.0e+00 1461.8 952 76.1
MD17G1113900 Malus domestica HOM05D005707 ORTHO05D007276 0.0e+00 1461.4 953 76.6
Manes.12G065301 Manihot esculenta HOM05D005707 ORTHO05D007276 0.0e+00 1459.5 946 76.7
Hma1.2p1_1267F.1_g271460 Hydrangea macrophylla HOM05D005707 ORTHO05D007276 0.0e+00 1459.1 936 77.1
TAR626G1120 Trochodendron aralioides HOM05D005707 ORTHO05D007276 0.0e+00 1456.4 963 74.8
CSS0003308 Camellia sinensis var. sinensis HOM05D005707 ORTHO05D007276 0.0e+00 1455.3 943 77.3
CSS0049316 Camellia sinensis var. sinensis HOM05D005707 ORTHO05D007276 0.0e+00 1455.3 943 77.3
TWI75G1501 Tripterygium wilfordii HOM05D005707 ORTHO05D007276 0.0e+00 1453.7 945 76.9
Gohir.A11G149550 Gossypium hirsutum HOM05D005707 ORTHO05D007276 0.0e+00 1450.6 952 75.5
MD09G1123500 Malus domestica HOM05D005707 ORTHO05D007276 0.0e+00 1449.9 946 76.6
Potri.014G165400 Populus trichocarpa HOM05D005707 ORTHO05D007276 0.0e+00 1449.9 963 75.7
Eucgr.A01050 Eucalyptus grandis HOM05D005707 ORTHO05D007276 0.0e+00 1448.0 947 76.0
PGSC0003DMG400026068 Solanum tuberosum HOM05D005707 ORTHO05D007276 0.0e+00 1446.0 949 75.1
Sabra14G0126000 Salix brachista HOM05D005707 ORTHO05D007276 0.0e+00 1445.6 962 75.2
Actinidia09778 Actinidia chinensis HOM05D005707 ORTHO05D007276 0.0e+00 1444.9 963 75.7
CAN.G308.64 Capsicum annuum HOM05D005707 ORTHO05D007276 0.0e+00 1444.5 952 75.1
GSVIVG01030049001 Vitis vinifera HOM05D005707 ORTHO05D007276 0.0e+00 1444.1 934 77.7
Rhsim06G0174400 Rhododendron simsii HOM05D005707 ORTHO05D007276 0.0e+00 1443.7 949 76.2
Sopen06g023670 Solanum pennellii HOM05D005707 ORTHO05D007276 0.0e+00 1440.6 951 75.0
Nitab4.5_0001082g0050 Nicotiana tabacum HOM05D005707 ORTHO05D007276 0.0e+00 1439.5 952 74.9
CANSAT64G1567 Cannabis sativa HOM05D005707 ORTHO05D007276 0.0e+00 1438.7 959 75.2
Atru.BG.42.p Acer truncatum HOM05D005707 ORTHO05D007276 0.0e+00 1438.3 932 77.1
Solyc06g065170.4 Solanum lycopersicum HOM05D005707 ORTHO05D007276 0.0e+00 1437.6 951 74.6
Ciclev10018207m.g Citrus clementina HOM05D005707 ORTHO05D007276 0.0e+00 1436.4 948 75.6
FvH4_6g40910 Fragaria vesca HOM05D005707 ORTHO05D007276 0.0e+00 1434.5 940 76.0
ClCG02G009340 Citrullus lanatus HOM05D005707 ORTHO05D007276 0.0e+00 1433.7 963 74.6
FAN14G2372 Fragaria x ananassa HOM05D005707 ORTHO05D007276 0.0e+00 1433.3 940 75.9
MELO3C025972.2 Cucumis melo HOM05D005707 ORTHO05D007276 0.0e+00 1432.9 963 74.5
Nn1g03422 Nelumbo nucifera HOM05D005707 ORTHO05D007276 0.0e+00 1432.9 949 74.4
Aqoxy2G03044 Aquilegia oxysepala HOM05D005707 ORTHO05D007276 0.0e+00 1431.4 948 74.8
RcHm_v2.0_Chr2g0156491 Rosa chinensis HOM05D005707 ORTHO05D007276 0.0e+00 1431.0 944 75.6
TWI18G1214 Tripterygium wilfordii HOM05D005707 ORTHO05D007276 0.0e+00 1430.6 960 74.9
CsaV3_6G009510 Cucumis sativus L. HOM05D005707 ORTHO05D007276 0.0e+00 1429.5 963 74.4
FAN02G0692 Fragaria x ananassa HOM05D005707 ORTHO05D007276 0.0e+00 1427.9 940 75.5
FAN05G2777 Fragaria x ananassa HOM05D005707 ORTHO05D007276 0.0e+00 1427.5 940 75.6
FAN09G4573 Fragaria x ananassa HOM05D005707 ORTHO05D007276 0.0e+00 1424.8 940 75.3
HanXRQChr03g0075251 Helianthus annuus HOM05D005707 ORTHO05D007276 0.0e+00 1424.5 945 75.9
Lj8A134G73 Lonicera japonica HOM05D005707 ORTHO05D007276 0.0e+00 1424.5 940 76.0
Nitab4.5_0000303g0290 Nicotiana tabacum HOM05D005707 ORTHO05D007276 0.0e+00 1424.1 951 74.7
Glyma.07G119500 Glycine max HOM05D005707 ORTHO05D007276 0.0e+00 1423.3 966 74.1
Peaxi162Scf00268g00614 Petunia axillaris HOM05D005707 ORTHO05D007276 0.0e+00 1423.3 951 74.7
Cc07_g12010 Coffea canephora HOM05D005707 ORTHO05D007276 0.0e+00 1422.9 946 75.3
Phvul.010G042100 Phaseolus vulgaris HOM05D005707 ORTHO05D007276 0.0e+00 1421.8 962 74.2
Sed0013138 Sechium edule HOM05D005707 ORTHO05D007276 0.0e+00 1421.8 956 74.9
arahy.Tifrunner.gnm1.ann1.T3MKLR Arachis hypogaea HOM05D005707 ORTHO05D007276 0.0e+00 1420.2 947 75.5
Duzib138G1526 Durio zibethinus HOM05D005707 ORTHO05D007276 0.0e+00 1419.1 950 74.0
Ca_27368_v3 Cicer arietinum L. HOM05D005707 ORTHO05D007276 0.0e+00 1418.7 969 74.0
ECA240G2058 Erigeron canadensis HOM05D005707 ORTHO05D007276 0.0e+00 1417.9 936 75.9
Glyma.03G104400 Glycine max HOM05D005707 ORTHO05D007276 0.0e+00 1416.0 965 73.8
VMungo0331G1616 Vigna mungo HOM05D005707 ORTHO05D007276 0.0e+00 1415.2 962 74.0
Lj6g0020016 Lotus japonicus HOM05D005707 ORTHO05D007276 0.0e+00 1414.8 983 73.4
PSO732G0538 Papaver somniferum HOM05D005707 ORTHO05D007276 0.0e+00 1414.8 960 72.3
Nn1g03246 Nelumbo nucifera HOM05D005707 ORTHO05D007276 0.0e+00 1413.7 951 73.1
MBI16_g36319_MAGBIO Magnolia biondii HOM05D005707 ORTHO05D007276 0.0e+00 1413.3 940 74.5
Lj1C792T2 Lonicera japonica HOM05D005707 ORTHO05D007276 0.0e+00 1412.5 933 74.8
QL06p053011 Quercus lobata HOM05D005707 ORTHO05D007276 0.0e+00 1412.5 968 74.0
THA.LOC104808851 Tarenaya hassleriana HOM05D005707 ORTHO05D007276 0.0e+00 1412.5 961 73.4
PSO675G5925 Papaver somniferum HOM05D005707 ORTHO05D007276 0.0e+00 1409.4 960 72.2
Lsat_1_v5_gn_0_5460 Lactuca sativa HOM05D005707 ORTHO05D007276 0.0e+00 1407.9 954 74.6
Lj1g0027558 Lotus japonicus HOM05D005707 ORTHO05D007276 0.0e+00 1407.9 967 73.2
Ah.15g094340 Amaranthus hybridus HOM05D005707 ORTHO05D007276 0.0e+00 1404.8 961 73.9
AUR62025658 Chenopodium quinoa HOM05D005707 ORTHO05D007276 0.0e+00 1404.8 957 73.1
AUR62001346 Chenopodium quinoa HOM05D005707 ORTHO05D007276 0.0e+00 1404.4 957 72.9
Sed0020801 Sechium edule HOM05D005707 ORTHO05D007276 0.0e+00 1399.4 953 73.5
Lsat_1_v5_gn_9_90020 Lactuca sativa HOM05D005707 ORTHO05D007276 0.0e+00 1398.3 953 74.3
arahy.Tifrunner.gnm1.ann1.DQM4AF Arachis hypogaea HOM05D005707 ORTHO05D007276 0.0e+00 1397.9 981 72.7
Sp3g23690 Schrenkiella parvula HOM05D005707 ORTHO05D007276 0.0e+00 1395.9 940 73.8
SpUn0142_0010 Schrenkiella parvula HOM05D005707 ORTHO05D007276 0.0e+00 1395.9 940 73.8
Thhalv10002393m.g Eutrema salsugineum HOM05D005707 ORTHO05D007276 0.0e+00 1392.9 940 73.9
DCAR_012906 Daucus carota HOM05D005707 ORTHO05D007276 0.0e+00 1390.6 939 73.7
EL10Ac7g18165 Beta vulgaris HOM05D005707 ORTHO05D007276 0.0e+00 1385.9 943 73.1
A07p06540 Brassica napus HOM05D005707 ORTHO05D007276 0.0e+00 1384.8 940 73.2
Medtr1g019500 Medicago truncatula HOM05D005707 ORTHO05D007276 0.0e+00 1384.8 953 73.6
Hund18608 Selenicereus undatus HOM05D005707 ORTHO05D007276 0.0e+00 1384.0 972 70.8
Lalb_Chr19g0124221 Lupinus albus HOM05D005707 ORTHO05D007276 0.0e+00 1382.9 953 73.1
unitig_37.g12597 Utricularia gibba HOM05D005707 ORTHO05D007276 0.0e+00 1382.1 932 73.8
BraA07t28449Z Brassica rapa HOM05D005707 ORTHO05D007276 0.0e+00 1380.2 940 73.0
Carub.0003s2668 Capsella rubella HOM05D005707 ORTHO05D007276 0.0e+00 1380.2 943 72.7
TPR.G3804 Trifolium pratense HOM05D005707 ORTHO05D007276 0.0e+00 1379.8 966 72.2
BcaC06g35905 Brassica carinata HOM05D005707 ORTHO05D007276 0.0e+00 1379.4 940 73.0
BolC7t41423H Brassica oleracea HOM05D005707 ORTHO05D007276 0.0e+00 1379.4 940 73.0
BcaB06g26833 Brassica carinata HOM05D005707 ORTHO05D007276 0.0e+00 1377.1 936 73.7
C07p09820 Brassica napus HOM05D005707 ORTHO05D007276 0.0e+00 1375.1 940 72.8
AL3G42770 Arabidopsis lyrata HOM05D005707 ORTHO05D007276 0.0e+00 1374.8 943 72.5
vmacro12103 Vaccinium macrocarpon HOM05D005707 ORTHO05D007276 0.0e+00 1372.5 945 73.5
AT2G05170 Arabidopsis thaliana HOM05D005707 ORTHO05D007276 0.0e+00 1369.8 943 72.7
CARHR103040 Cardamine hirsuta HOM05D005707 ORTHO05D007276 0.0e+00 1368.2 943 72.6
Oeu012343.5 Olea europaea HOM05D005707 ORTHO05D007276 0.0e+00 1350.5 948 72.9
Aa31LG9G17700 Aethionema arabicum HOM05D005707 ORTHO05D007276 0.0e+00 1349.3 958 70.9
ATR0626G192 Amborella trichopoda HOM05D005707 ORTHO05D007276 0.0e+00 1349.3 938 71.7
COL.COLO4_09234 Corchorus olitorius HOM05D005707 ORTHO05D007276 0.0e+00 1319.7 951 70.9
Zm00001eb420950 Zea mays HOM05D005707 ORTHO05D007276 0.0e+00 1318.1 952 67.2
Os04g0382700 Oryza sativa ssp. japonica HOM05D005707 ORTHO05D007276 0.0e+00 1312.4 944 68.2
SEGI_38374 Sequoiadendron giganteum HOM05D005707 ORTHO05D007276 0.0e+00 1270.4 955 66.2
Thecc.01G191800 Theobroma cacao HOM05D005707 ORTHO05D007276 0.0e+00 1258.8 833 75.8
DCAR_028089 Daucus carota HOM05D005707 ORTHO05D007276 0.0e+00 1222.6 847 72.5
Psat6g013160 Pisum sativum HOM05D005707 ORTHO05D007276 0.0e+00 1200.7 846 72.5
AagrBONN_evm.TU.Sc2ySwM_344.1573 Anthoceros agrestis HOM05D005707 ORTHO05D007276 0.0e+00 1134.4 957 58.5
Lalb_Chr01g0023301 Lupinus albus HOM05D005707 ORTHO05D007276 0.0e+00 1130.5 702 79.2
Sc15g0001000 Simmondsia chinensis HOM05D005707 ORTHO05D007276 0.0e+00 1130.5 701 80.0
Mapoly0022s0120 Marchantia polymorpha HOM05D005707 ORTHO05D007276 0.0e+00 1129.8 985 57.5
Cpa.g.sc211.13 Carica papaya HOM05D005707 ORTHO05D007276 6.5e-312 1074.7 958 59.7
Pp3c25_5560 Physcomitrium patens HOM05D005707 ORTHO05D007276 3.5e-308 1061.6 1005 53.8
SMO329G0026 Selaginella moellendorffii HOM05D005707 ORTHO05D007276 2.2e-302 1042.3 934 57.6
Hma1.2p1_2056F.1_g312820 Hydrangea macrophylla HOM05D005707 ORTHO05D007276 4.6e-284 981.5 663 73.8
Hma1.2p1_1267F.1_g271470 Hydrangea macrophylla HOM05D005707 ORTHO05D007276 4.8e-281 971.5 631 75.9
CDE12G0215 Ceratophyllum demersum HOM05D005707 ORTHO05D007276 6.1e-268 927.9 705 65.5
CBR_g20017 Chara braunii HOM05D005707 ORTHO05D007276 1.1e-221 774.2 750 52.0
Lsat_1_v5_gn_9_104540 Lactuca sativa HOM05D005707 ORTHO05D007276 1.1e-187 661.4 465 71.0
HPP92_028369 Vanilla planifolia HOM05D005707 ORTHO05D007276 9.6e-173 611.7 441 68.7
Cre02.g095074 Chlamydomonas reinhardtii HOM05D005707 ORTHO05D007276 8.0e-111 406.0 1302 25.1
HPP92_028368 Vanilla planifolia HOM05D005707 ORTHO05D007276 1.4e-110 405.2 304 65.1
PRCOL_00006472 Prasinoderma coloniale HOM05D005707 ORTHO05D007276 8.9e-110 402.5 629 39.3
Lalb_Chr01g0023291 Lupinus albus HOM05D005707 ORTHO05D007276 4.8e-71 273.9 200 67.5
Nn6g32392 Nelumbo nucifera HOM05D005707 ORTHO05D007276 5.4e-67 260.4 164 78.7
HPP92_014038 Vanilla planifolia HOM05D005707 ORTHO05D007276 4.9e-60 237.3 181 68.0
Nn6g32391 Nelumbo nucifera HOM05D005707 ORTHO05D007276 3.7e-47 194.5 112 81.2
SEGI_06176 Sequoiadendron giganteum HOM05D005707 ORTHO05D007276 4.1e-46 191.0 301 40.5
Peaxi162Scf00585g00082 Petunia axillaris HOM05D000636 ORTHO05D002338 3.2e-43 181.4 132 65.9
HPP92_014037 Vanilla planifolia HOM05D005707 ORTHO05D048631 5.5e-35 154.1 154 52.6
Nn2g13354 Nelumbo nucifera HOM05D005707 ORTHO05D007276 5.0e-28 131.0 64 92.2
HPP92_014036 Vanilla planifolia HOM05D005707 ORTHO05D007276 2.8e-23 115.2 202 35.1
VMungo0331G0660 Vigna mungo HOM05D000100 ORTHO05D000052 3.7e-15 88.2 79 62.0
MD09G1123100 Malus domestica HOM05D005707 ORTHO05D048631 2.4e-06 58.9 45 64.4


User provided reference genes

Program Settings