Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold68G22808 Striga asiatica HOM05D006371 ORTHO05D008309 0.0e+00 2014.6 1048 100.0
Migut.D00896 Erythranthe guttata HOM05D006371 ORTHO05D008309 1.3e-292 1010.0 948 59.8
SalBow7G3887 Salvia bowleyana HOM05D006371 ORTHO05D008309 1.3e-276 956.8 968 56.9
MSTRG.10896 Avicennia marina HOM05D006371 ORTHO05D008309 5.0e-239 832.0 775 60.8
Dinv40160 Davidia involucrata HOM05D006371 ORTHO05D008309 9.1e-233 811.2 977 50.8
Cc07_g11500 Coffea canephora HOM05D006371 ORTHO05D008309 5.0e-231 805.4 998 49.4
Actinidia02362 Actinidia chinensis HOM05D006371 ORTHO05D008309 1.2e-229 800.8 985 50.2
CSS0032100 Camellia sinensis var. sinensis HOM05D006371 ORTHO05D008309 1.2e-221 774.2 834 54.3
Lj4C228G6 Lonicera japonica HOM05D006371 ORTHO05D008309 4.4e-219 765.8 1012 48.1
Dinv08538 Davidia involucrata HOM05D006371 ORTHO05D008309 4.9e-218 762.3 904 51.2
PGSC0003DMG400001545 Solanum tuberosum HOM05D006371 ORTHO05D008309 5.4e-217 758.8 993 49.0
Nn1g07560 Nelumbo nucifera HOM05D006371 ORTHO05D008309 2.0e-216 756.9 964 48.8
Solyc02g083140.3 Solanum lycopersicum HOM05D006371 ORTHO05D008309 4.6e-216 755.7 990 48.4
EL10Ac6g13348 Beta vulgaris HOM05D006371 ORTHO05D008309 6.6e-215 751.9 965 47.9
Cfa014202 Carpinus fangiana HOM05D006371 ORTHO05D008309 2.5e-214 750.0 957 47.8
GSVIVG01030124001 Vitis vinifera HOM05D006371 ORTHO05D008309 9.5e-214 748.0 948 49.7
Sopen02g027900 Solanum pennellii HOM05D006371 ORTHO05D008309 2.1e-213 746.9 972 48.8
Duzib211G0069 Durio zibethinus HOM05D006371 ORTHO05D008309 3.1e-212 743.0 957 47.9
FAN14G0004 Fragaria x ananassa HOM05D006371 ORTHO05D008309 5.2e-212 742.3 965 48.3
FvH4_6g40410 Fragaria vesca HOM05D006371 ORTHO05D008309 8.9e-212 741.5 965 48.3
CiPaw.03G283700 Carya illinoinensis HOM05D006371 ORTHO05D008309 1.2e-211 741.1 843 52.0
QL04p067039 Quercus lobata HOM05D006371 ORTHO05D008309 3.4e-211 739.6 957 48.7
RcHm_v2.0_Chr2g0155641 Rosa chinensis HOM05D006371 ORTHO05D008309 3.4e-211 739.6 960 48.4
Glyma.14G190200 Glycine max HOM05D006371 ORTHO05D008309 5.8e-211 738.8 947 48.3
Gohir.D11G154800 Gossypium hirsutum HOM05D006371 ORTHO05D008309 2.9e-210 736.5 783 54.9
Ciclev10014166m.g Citrus clementina HOM05D006371 ORTHO05D008309 3.7e-210 736.1 964 48.0
Gorai.007G165100 Gossypium raimondii HOM05D006371 ORTHO05D008309 6.4e-210 735.3 781 55.1
AUR62039632 Chenopodium quinoa HOM05D006371 ORTHO05D008309 2.4e-209 733.4 973 47.4
Gohir.A11G148000 Gossypium hirsutum HOM05D006371 ORTHO05D008309 4.1e-209 732.6 781 54.8
Glyma.02G223400 Glycine max HOM05D006371 ORTHO05D008309 7.1e-209 731.9 846 50.7
LjContig00155g0006571 Lotus japonicus HOM05D006371 ORTHO05D008309 7.1e-209 731.9 926 49.7
arahy.Tifrunner.gnm1.ann1.YIC3VW Arachis hypogaea HOM05D006371 ORTHO05D008309 1.2e-208 731.1 854 50.9
Ah.02g129050 Amaranthus hybridus HOM05D006371 ORTHO05D008309 1.6e-208 730.7 854 52.5
Duzib133G1082 Durio zibethinus HOM05D006371 ORTHO05D008309 2.7e-208 729.9 942 48.6
FAN05G5438 Fragaria x ananassa HOM05D006371 ORTHO05D008309 3.5e-208 729.6 964 47.5
FAN09G0519 Fragaria x ananassa HOM05D006371 ORTHO05D008309 3.5e-208 729.6 967 47.8
FAN02G4613 Fragaria x ananassa HOM05D006371 ORTHO05D008309 6.0e-208 728.8 967 47.3
arahy.Tifrunner.gnm1.ann1.BM1T67 Arachis hypogaea HOM05D006371 ORTHO05D008309 7.8e-208 728.4 817 52.5
MD09G1130200 Malus domestica HOM05D006371 ORTHO05D008309 1.0e-207 728.0 969 47.7
AL3G41970 Arabidopsis lyrata HOM05D006371 ORTHO05D008309 2.3e-207 726.9 957 47.5
MELO3C024185.2 Cucumis melo HOM05D006371 ORTHO05D008309 3.0e-207 726.5 953 47.0
Nitab4.5_0005413g0050 Nicotiana tabacum HOM05D006371 ORTHO05D008309 8.6e-207 724.9 983 47.3
TWI36G0955 Tripterygium wilfordii HOM05D006371 ORTHO05D008309 2.5e-206 723.4 771 54.9
CANSAT64G2089 Cannabis sativa HOM05D006371 ORTHO05D008309 4.3e-206 722.6 798 53.3
Manes.12G064500 Manihot esculenta HOM05D006371 ORTHO05D008309 4.7e-205 719.2 959 47.3
CARHR102110 Cardamine hirsuta HOM05D006371 ORTHO05D008309 1.4e-204 717.6 940 47.4
Prupe.3G194900 Prunus persica HOM05D006371 ORTHO05D008309 3.1e-204 716.5 962 46.7
Lalb_Chr04g0252451 Lupinus albus HOM05D006371 ORTHO05D008309 1.2e-203 714.5 842 51.0
Carub.0003s2599 Capsella rubella HOM05D006371 ORTHO05D008309 1.5e-203 714.1 943 47.6
AUR62040011 Chenopodium quinoa HOM05D006371 ORTHO05D008309 1.5e-203 714.1 913 48.7
Oeu049652.2 Olea europaea HOM05D006371 ORTHO05D008309 2.6e-203 713.4 1084 44.3
Peaxi162Scf00300g00515 Petunia axillaris HOM05D006371 ORTHO05D008309 4.4e-203 712.6 996 46.8
PSO675G4792 Papaver somniferum HOM05D006371 ORTHO05D008309 7.6e-203 711.8 955 47.7
Sc07g0001260 Simmondsia chinensis HOM05D006371 ORTHO05D008309 9.9e-203 711.4 943 47.7
CAN.G890.8 Capsicum annuum HOM05D006371 ORTHO05D008309 1.7e-202 710.7 767 54.4
PSO541G0072 Papaver somniferum HOM05D006371 ORTHO05D008309 1.7e-202 710.7 958 47.2
Eucgr.A01367 Eucalyptus grandis HOM05D006371 ORTHO05D008309 4.9e-202 709.1 775 53.4
Thhalv10002385m.g Eutrema salsugineum HOM05D006371 ORTHO05D008309 4.9e-202 709.1 973 46.7
Sed0018275 Sechium edule HOM05D006371 ORTHO05D008309 8.4e-202 708.4 835 51.1
CsaV3_2G010080 Cucumis sativus L. HOM05D006371 ORTHO05D008309 1.4e-201 707.6 790 52.0
AT2G04270 Arabidopsis thaliana HOM05D006371 ORTHO05D008309 3.2e-201 706.4 735 55.4
PGR031G1410 Punica granatum HOM05D006371 ORTHO05D008309 3.2e-201 706.4 790 52.8
Ca_05557_v3 Cicer arietinum L. HOM05D006371 ORTHO05D008309 5.4e-201 705.7 939 46.4
Potri.014G170300 Populus trichocarpa HOM05D006371 ORTHO05D008309 5.4e-201 705.7 777 52.9
Sp3g23150 Schrenkiella parvula HOM05D006371 ORTHO05D008309 1.2e-200 704.5 963 46.2
THA.LOC104808834 Tarenaya hassleriana HOM05D006371 ORTHO05D008309 1.2e-200 704.5 881 48.7
Aqoxy3G02224 Aquilegia oxysepala HOM05D006371 ORTHO05D008309 2.7e-200 703.4 839 49.7
BcaB06g26772 Brassica carinata HOM05D006371 ORTHO05D008309 3.5e-200 703.0 958 46.6
Sabra14G0129800 Salix brachista HOM05D006371 ORTHO05D008309 2.3e-199 700.3 779 53.4
Psat2g060760 Pisum sativum HOM05D006371 ORTHO05D008309 1.1e-198 698.0 780 52.4
COL.COLO4_19652 Corchorus olitorius HOM05D006371 ORTHO05D008309 1.9e-198 697.2 957 46.9
HanXRQChr09g0256951 Helianthus annuus HOM05D006371 ORTHO05D008309 3.3e-198 696.4 884 49.7
BcaC06g35860 Brassica carinata HOM05D006371 ORTHO05D008309 9.6e-198 694.9 810 52.0
BraA07t28469Z Brassica rapa HOM05D006371 ORTHO05D008309 2.8e-197 693.3 843 50.7
ECA232G0409 Erigeron canadensis HOM05D006371 ORTHO05D008309 1.1e-196 691.4 883 48.5
C07p10340 Brassica napus HOM05D006371 ORTHO05D008309 1.4e-196 691.0 811 51.9
BolC7t41483H Brassica oleracea HOM05D006371 ORTHO05D008309 2.4e-196 690.3 811 51.9
TPR.G13852 Trifolium pratense HOM05D006371 ORTHO05D008309 4.0e-196 689.5 832 49.6
A07p06760 Brassica napus HOM05D006371 ORTHO05D008309 5.2e-196 689.1 834 50.5
Aa31sc575G10 Aethionema arabicum HOM05D006371 ORTHO05D008309 2.0e-195 687.2 869 49.3
Lsat_1_v5_gn_4_142580 Lactuca sativa HOM05D006371 ORTHO05D008309 3.4e-195 686.4 898 48.2
ECA238G3451 Erigeron canadensis HOM05D006371 ORTHO05D008309 4.4e-195 686.0 870 48.6
ATR0751G221 Amborella trichopoda HOM05D006371 ORTHO05D008309 8.4e-194 681.8 994 44.8
TAR627G0565 Trochodendron aralioides HOM05D006371 ORTHO05D008309 7.1e-193 678.7 869 49.1
Thecc.01G199300 Theobroma cacao HOM05D006371 ORTHO05D008309 2.3e-191 673.7 937 47.4
HPP92_003032 Vanilla planifolia HOM05D006371 ORTHO05D008309 9.3e-185 651.7 834 47.6
Hund03659 Selenicereus undatus HOM05D006371 ORTHO05D008309 1.0e-183 648.3 965 44.4
Medtr5g069430 Medicago truncatula HOM05D006371 ORTHO05D008309 8.1e-181 638.6 833 47.9
Os08g0323600 Oryza sativa ssp. japonica HOM05D006371 ORTHO05D008309 1.4e-180 637.9 717 51.5
Zm00001eb038720 Zea mays HOM05D006371 ORTHO05D008309 3.8e-178 629.8 728 50.3
unitig_748.g7080 Utricularia gibba HOM05D006371 ORTHO05D005825 2.7e-176 623.6 709 52.9
Cpa.g.sc136.51 Carica papaya HOM05D006371 ORTHO05D008309 9.6e-174 615.1 568 58.8
Hma1.2p1_0315F.1_g122770 Hydrangea macrophylla HOM05D006371 ORTHO05D008309 6.1e-160 569.3 728 50.3
Hund03661 Selenicereus undatus HOM05D006371 ORTHO05D008309 1.0e-159 568.5 906 42.8
MBI15_g38530_MAGBIO Magnolia biondii HOM05D006371 ORTHO05D008309 6.9e-156 555.8 749 47.8
Phvul.008G190000 Phaseolus vulgaris HOM05D006371 ORTHO05D008309 1.0e-154 552.0 734 47.3
Nitab4.5_0023804g0010 Nicotiana tabacum HOM05D006371 ORTHO05D008309 2.9e-154 550.4 761 48.2
ClCG02G003000 Citrullus lanatus HOM05D006371 ORTHO05D008309 7.4e-150 535.8 761 45.5
vmacro20507 Vaccinium macrocarpon HOM05D006371 ORTHO05D008309 4.8e-149 533.1 1056 38.0
DCAR_023137 Daucus carota HOM05D006371 ORTHO05D008309 2.5e-145 520.8 642 49.8
Mapoly0111s0056 Marchantia polymorpha HOM05D006371 ORTHO05D008309 1.1e-142 511.9 728 43.8
CDE02G2282 Ceratophyllum demersum HOM05D006371 ORTHO05D008309 1.2e-131 475.3 727 42.8
Pp3c4_14910 Physcomitrium patens HOM05D006371 ORTHO05D008309 1.8e-127 461.5 746 38.2
Atru.chr6.3429 Acer truncatum HOM05D006371 ORTHO05D008309 4.7e-120 436.8 671 42.6
Rhsim10G0203500 Rhododendron simsii HOM05D006371 ORTHO05D008309 3.5e-115 420.6 1015 35.7
SMO117G0275 Selaginella moellendorffii HOM05D006371 ORTHO05D008309 4.7e-112 410.2 581 43.0
AagrBONN_evm.TU.Sc2ySwM_368.983 Anthoceros agrestis HOM05D006371 ORTHO05D008309 1.8e-111 408.3 707 38.9
Haze_12588 Corylus avellana HOM05D006371 ORTHO05D008309 1.9e-105 388.3 633 41.2
Haze_12589 Corylus avellana HOM05D006371 ORTHO05D008309 4.3e-65 254.2 285 53.7
SEGI_21719 Sequoiadendron giganteum HOM05D006371 ORTHO05D008309 2.1e-64 251.9 208 62.0
AUR62026198 Chenopodium quinoa HOM05D006371 ORTHO05D008309 4.9e-53 214.2 157 68.2
MD17G1105600 Malus domestica HOM05D006371 ORTHO05D008309 8.7e-42 176.8 197 52.3
Ca_28887_v3 Cicer arietinum L. HOM05D006371 ORTHO05D008309 2.5e-36 158.7 370 29.2
MCO12G287 Micromonas commoda HOM05D006371 ORTHO05D008309 8.2e-32 143.7 324 30.9
CBR_g28919 Chara braunii HOM05D006371 ORTHO05D000048 1.6e-22 112.8 114 50.0
SEGI_30134 Sequoiadendron giganteum HOM05D006371 ORTHO05D008309 8.5e-21 107.1 277 33.6
CBR_g28922 Chara braunii HOM05D000019 ORTHO05D000048 6.5e-13 80.9 258 31.0
AUR62026199 Chenopodium quinoa HOM05D000691 ORTHO05D000378 2.7e-11 75.5 70 60.0
SEGI_19700 Sequoiadendron giganteum HOM05D006371 ORTHO05D008309 6.1e-11 74.3 73 53.4
MD17G1105400 Malus domestica HOM05D006371 ORTHO05D008309 2.3e-10 72.4 89 46.1


User provided reference genes

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