Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold52G18936 Striga asiatica HOM05D002121 ORTHO05D008891 1.6e-230 802.4 406 100.0
Migut.C01114 Erythranthe guttata HOM05D002121 ORTHO05D008891 1.7e-174 616.3 403 76.9
MSTRG.25368 Avicennia marina HOM05D002121 ORTHO05D008891 1.2e-169 600.1 405 75.6
Cc10_g12290 Coffea canephora HOM05D002121 ORTHO05D008891 1.8e-144 516.5 366 71.3
Actinidia03419 Actinidia chinensis HOM05D002121 ORTHO05D008891 7.8e-140 501.1 401 65.8
Nitab4.5_0000111g0140 Nicotiana tabacum HOM05D002121 ORTHO05D008891 2.3e-139 499.6 385 68.8
PGSC0003DMG400009246 Solanum tuberosum HOM05D002121 ORTHO05D008891 3.3e-138 495.7 354 71.8
Sopen11g009470 Solanum pennellii HOM05D002121 ORTHO05D008891 1.6e-137 493.4 379 68.9
CSS0024419 Camellia sinensis var. sinensis HOM05D002121 ORTHO05D008891 8.1e-137 491.1 387 66.4
Dinv27282 Davidia involucrata HOM05D002121 ORTHO05D008891 2.4e-136 489.6 396 64.6
Ciclev10001657m.g Citrus clementina HOM05D002121 ORTHO05D008891 4.5e-135 485.3 355 67.6
Gorai.009G248000 Gossypium raimondii HOM05D002121 ORTHO05D008891 5.8e-135 485.0 366 65.6
Gohir.A05G237100 Gossypium hirsutum HOM05D002121 ORTHO05D008891 3.8e-134 482.3 374 64.4
RcHm_v2.0_Chr6g0296321 Rosa chinensis HOM05D002121 ORTHO05D008891 6.4e-134 481.5 379 65.7
Gohir.D05G239200 Gossypium hirsutum HOM05D002121 ORTHO05D008891 4.2e-133 478.8 374 63.9
CAN.G1391.3 Capsicum annuum HOM05D002121 ORTHO05D008891 5.4e-133 478.4 343 70.8
Duzib093G0305 Durio zibethinus HOM05D002121 ORTHO05D008891 1.2e-132 477.2 393 62.8
FAN15G1848 Fragaria x ananassa HOM05D002121 ORTHO05D008891 2.7e-132 476.1 379 63.9
Nn1g08892 Nelumbo nucifera HOM05D002121 ORTHO05D008891 1.3e-131 473.8 409 62.8
FvH4_2g27490 Fragaria vesca HOM05D002121 ORTHO05D008891 1.8e-131 473.4 379 63.6
TAR376G0507 Trochodendron aralioides HOM05D002121 ORTHO05D008891 2.3e-131 473.0 392 62.8
Prupe.1G492700 Prunus persica HOM05D002121 ORTHO05D008891 6.7e-131 471.5 373 64.6
CiPaw.15G034100 Carya illinoinensis HOM05D002121 ORTHO05D008891 8.7e-131 471.1 381 64.6
Rhsim11G0070100 Rhododendron simsii HOM05D002121 ORTHO05D008891 3.3e-130 469.2 344 70.1
Manes.02G166400 Manihot esculenta HOM05D002121 ORTHO05D008891 9.6e-130 467.6 393 61.8
HanXRQChr05g0148721 Helianthus annuus HOM05D002121 ORTHO05D008891 1.3e-129 467.2 370 66.8
QL09p033741 Quercus lobata HOM05D002121 ORTHO05D008891 1.3e-129 467.2 317 72.6
vmacro00852 Vaccinium macrocarpon HOM05D002121 ORTHO05D008891 2.8e-129 466.1 430 60.0
Thecc.08G129600 Theobroma cacao HOM05D002121 ORTHO05D008891 3.7e-129 465.7 304 73.4
FAN20G0023 Fragaria x ananassa HOM05D002121 ORTHO05D008891 4.8e-129 465.3 366 64.5
CsaV3_6G034200 Cucumis sativus L. HOM05D002121 ORTHO05D008891 6.2e-129 464.9 352 65.3
Atru.chr13.1527 Acer truncatum HOM05D002121 ORTHO05D008891 1.1e-128 464.2 341 66.6
Hund17311 Selenicereus undatus HOM05D002121 ORTHO05D008891 1.1e-128 464.2 383 63.2
TWI32G0996 Tripterygium wilfordii HOM05D002121 ORTHO05D008891 1.1e-128 464.2 380 62.9
MELO3C010637.2 Cucumis melo HOM05D002121 ORTHO05D008891 2.4e-128 463.0 354 65.0
Haze_17516 Corylus avellana HOM05D002121 ORTHO05D008891 6.9e-128 461.5 375 64.0
DCAR_014379 Daucus carota HOM05D001700 ORTHO05D002131 9.0e-128 461.1 368 64.7
arahy.Tifrunner.gnm1.ann1.VL2KU3 Arachis hypogaea HOM05D002121 ORTHO05D008891 2.0e-127 459.9 383 62.1
CANSAT25G1674 Cannabis sativa HOM05D002121 ORTHO05D008891 2.0e-127 459.9 396 61.6
FAN27G1590 Fragaria x ananassa HOM05D002121 ORTHO05D008891 4.5e-127 458.8 335 68.4
Lsat_1_v5_gn_6_97640 Lactuca sativa HOM05D002121 ORTHO05D008891 1.3e-126 457.2 399 62.4
AUR62002267 Chenopodium quinoa HOM05D002121 ORTHO05D008891 2.2e-126 456.4 367 63.2
arahy.Tifrunner.gnm1.ann1.IC0JL2 Arachis hypogaea HOM05D002121 ORTHO05D008891 6.4e-126 454.9 382 61.8
EL10Ac1g00004 Beta vulgaris HOM05D002121 ORTHO05D008891 1.1e-125 454.1 354 64.1
Lalb_Chr23g0271121 Lupinus albus HOM05D002121 ORTHO05D008891 3.2e-125 452.6 383 59.5
Phvul.009G127600 Phaseolus vulgaris HOM05D002121 ORTHO05D008891 7.1e-125 451.4 377 59.7
Ah.05g171490 Amaranthus hybridus HOM05D002121 ORTHO05D008891 2.1e-124 449.9 368 62.8
COL.COLO4_37918 Corchorus olitorius HOM05D002121 ORTHO05D008891 3.5e-124 449.1 390 59.0
PSO170G0582 Papaver somniferum HOM05D002121 ORTHO05D008891 3.5e-124 449.1 375 62.4
Eucgr.F03811 Eucalyptus grandis HOM05D002121 ORTHO05D008891 6.0e-124 448.4 367 63.5
Aqoxy6G00263 Aquilegia oxysepala HOM05D002121 ORTHO05D008891 7.9e-124 448.0 383 60.1
BcaC05g26090 Brassica carinata HOM05D002121 ORTHO05D008891 3.0e-123 446.0 366 63.4
Potri.005G180700 Populus trichocarpa HOM05D002121 ORTHO05D008891 6.7e-123 444.9 386 59.3
FAN24G0685 Fragaria x ananassa HOM05D002121 ORTHO05D008891 1.5e-122 443.7 379 61.2
Peaxi162Scf00310g00513 Petunia axillaris HOM05D002121 ORTHO05D008891 1.5e-122 443.7 385 63.6
Ca_16577_v3 Cicer arietinum L. HOM05D002121 ORTHO05D008891 1.9e-122 443.4 387 58.1
BolC5t30768H Brassica oleracea HOM05D002121 ORTHO05D004000 3.3e-122 442.6 354 64.7
THA.LOC104800213 Tarenaya hassleriana HOM05D002121 ORTHO05D008891 1.3e-121 440.7 307 72.0
Thhalv10008051m.g Eutrema salsugineum HOM05D002121 ORTHO05D008891 1.6e-121 440.3 307 70.0
Psat5g086080 Pisum sativum HOM05D002121 ORTHO05D008891 1.6e-121 440.3 316 67.4
Glyma.06G115500 Glycine max HOM05D002121 ORTHO05D008891 2.8e-121 439.5 315 65.4
C05p20690 Brassica napus HOM05D002121 ORTHO05D004000 3.7e-121 439.1 355 64.8
Sc15g0002960 Simmondsia chinensis HOM05D002121 ORTHO05D008891 3.7e-121 439.1 303 70.6
CDE08G1413 Ceratophyllum demersum HOM05D002121 ORTHO05D008891 6.2e-121 438.3 335 64.5
Lj1g0016880 Lotus japonicus HOM05D002121 ORTHO05D008891 1.4e-120 437.2 387 59.7
BcaB07g32168 Brassica carinata HOM05D002121 ORTHO05D008891 1.8e-120 436.8 316 68.4
A06p17800 Brassica napus HOM05D002121 ORTHO05D004000 1.8e-120 436.8 356 64.3
Cpa.g.sc64.123 Carica papaya HOM05D002121 ORTHO05D008891 1.8e-120 436.8 332 65.4
Sp1g19270 Schrenkiella parvula HOM05D002121 ORTHO05D008891 1.8e-120 436.8 306 69.3
BcaB03g12775 Brassica carinata HOM05D002121 ORTHO05D008891 2.4e-120 436.4 374 61.0
BraA06t24872Z Brassica rapa HOM05D002121 ORTHO05D008891 3.1e-120 436.0 367 62.7
CARHR022070 Cardamine hirsuta HOM05D002121 ORTHO05D008891 1.2e-119 434.1 367 61.6
VMungo1309G2347 Vigna mungo HOM05D002121 ORTHO05D008891 1.5e-119 433.7 315 65.4
Aa31LG7G5680 Aethionema arabicum HOM05D002121 ORTHO05D008891 5.8e-119 431.8 392 59.4
Medtr3g088510 Medicago truncatula HOM05D002121 ORTHO05D008891 5.8e-119 431.8 379 58.3
Carub.0001s2115 Capsella rubella HOM05D002121 ORTHO05D008891 4.9e-118 428.7 385 59.5
AT1G21710 Arabidopsis thaliana HOM05D002121 ORTHO05D008891 8.4e-118 427.9 309 67.6
MBI06_g04552_MAGBIO Magnolia biondii HOM05D002121 ORTHO05D008891 8.4e-118 427.9 316 67.7
AL1G34880 Arabidopsis lyrata HOM05D002121 ORTHO05D008891 5.5e-117 425.2 364 61.0
ClCG08G005910 Citrullus lanatus HOM05D002121 ORTHO05D008891 7.9e-116 421.4 383 58.2
Solyc11g018510.2 Solanum lycopersicum HOM05D002121 ORTHO05D008891 2.6e-111 406.4 320 67.5
ATR0709G083 Amborella trichopoda HOM05D002121 ORTHO05D008891 4.6e-108 395.6 405 53.1
Dinv14647 Davidia involucrata HOM05D002121 ORTHO05D008891 2.3e-107 393.3 282 70.2
HPP92_011391 Vanilla planifolia HOM05D002121 ORTHO05D008891 3.9e-107 392.5 369 56.1
SEGI_00220 Sequoiadendron giganteum HOM05D002121 ORTHO05D008891 3.3e-106 389.4 314 61.5
SEGI_39313 Sequoiadendron giganteum HOM05D002121 ORTHO05D008891 3.3e-106 389.4 314 61.5
Lj7A344T50 Lonicera japonica HOM05D002121 ORTHO05D008891 2.4e-104 383.3 308 64.6
Mapoly0066s0098 Marchantia polymorpha HOM05D002121 ORTHO05D008891 2.0e-103 380.2 319 58.6
DCAR_002302 Daucus carota HOM05D002121 ORTHO05D008891 1.4e-101 374.0 308 62.7
Hma1.2p1_0612F.1_g188790 Hydrangea macrophylla HOM05D002121 ORTHO05D008891 1.4e-99 367.5 249 69.1
Zm00001eb243580 Zea mays HOM05D002121 ORTHO05D008891 9.7e-98 361.3 384 50.3
unitig_699.g19768 Utricularia gibba HOM05D002121 ORTHO05D003088 1.7e-97 360.5 358 55.6
Pp3c15_7530 Physcomitrium patens HOM05D002121 ORTHO05D008891 3.7e-97 359.4 307 57.0
Sed0022381 Sechium edule HOM05D002121 ORTHO05D008891 8.2e-97 358.2 310 58.7
Os02g0552600 Oryza sativa ssp. japonica HOM05D002121 ORTHO05D008891 3.1e-96 356.3 314 57.0
SMO367G0241 Selaginella moellendorffii HOM05D002121 ORTHO05D008891 2.0e-95 353.6 302 57.0
CAN.G1347.2 Capsicum annuum HOM05D002121 ORTHO05D008891 5.0e-94 349.0 373 53.4
AUR62015427 Chenopodium quinoa HOM05D002121 ORTHO05D008891 1.4e-93 347.4 366 53.3
Sabra05G0136700 Salix brachista HOM05D002121 ORTHO05D008891 1.9e-93 347.1 220 75.5
AagrBONN_evm.TU.Sc2ySwM_228.2791 Anthoceros agrestis HOM05D002121 ORTHO05D008891 3.0e-91 339.7 335 53.4
Migut.C00404 Erythranthe guttata HOM05D002121 ORTHO05D008891 1.1e-90 337.8 268 65.3
SalBow7G2694 Salvia bowleyana HOM05D002121 ORTHO05D008891 1.0e-83 314.7 206 79.1
GSVIVG01008832001 Vitis vinifera HOM05D002121 ORTHO05D008891 1.0e-75 288.1 187 73.8
ECA246G4340 Erigeron canadensis HOM05D002121 ORTHO05D008891 3.5e-71 273.1 172 77.9
BcaB03g12777 Brassica carinata HOM05D002121 ORTHO05D008891 3.3e-69 266.5 184 72.3
Cre01.g063632 Chlamydomonas reinhardtii HOM05D002121 ORTHO05D008891 3.4e-66 256.5 433 37.2
MCO08G296 Micromonas commoda HOM05D002121 ORTHO05D008891 2.9e-62 243.4 368 40.2
Sc15g0002990 Simmondsia chinensis HOM05D002121 ORTHO05D008891 2.5e-61 240.4 167 69.5
Oeu032210.1 Olea europaea HOM05D002121 ORTHO05D008891 1.2e-58 231.5 142 81.0
MBI06_g44498_MAGBIO Magnolia biondii HOM05D002121 ORTHO05D008891 4.7e-52 209.5 230 49.1
Sc15g0002970 Simmondsia chinensis HOM05D002121 ORTHO05D008891 1.2e-36 158.3 133 61.7
RcHm_v2.0_Chr2g0118881 Rosa chinensis HOM05D002121 ORTHO05D008891 5.6e-29 132.9 97 67.0
PRCOL_00001975 Prasinoderma coloniale HOM05D002121 ORTHO05D008891 7.1e-24 115.9 312 29.2
Hma1.2p1_0612F.1_g188810 Hydrangea macrophylla HOM05D002121 ORTHO05D008891 2.6e-18 97.4 57 86.0
HanXRQChr15g0473481 Helianthus annuus HOM05D002121 ORTHO05D008891 1.3e-17 95.1 50 86.0
Cfa022494 Carpinus fangiana HOM05D002121 ORTHO05D008891 1.8e-14 84.7 254 29.1
CBR_g3761 Chara braunii HOM05D002121 ORTHO05D008891 1.1e-11 75.5 194 27.8
PRCOL_00004066 Prasinoderma coloniale HOM05D002121 ORTHO05D008891 1.3e-09 68.6 160 29.4
CsaV3_1G008250 Cucumis sativus L. HOM05D007129 ORTHO05D008680 3.2e-08 63.9 239 25.9
BcaNung06176 Brassica carinata HOM05D007129 ORTHO05D008680 3.0e-06 57.4 102 39.2


User provided reference genes

Program Settings