Gene: C05p20690
General Information
Structural Information
- Species Brassica napus
- Gene Identifier C05p20690
- Transcript Identifier C05p20690
- Gene Type Coding gene
- Location C05 : 12725634-12728959 : positive
Gene Family Information
- ID HOM05D002121
- #Genes/#Species 315/100
- Phylogenetic origin
- ID ORTHO05D004000
- #Genes/#Species 195/97
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid C05p20690.1_BnaDAR
- v5 BnaC05g17040D
- single_cell_id C05p20690.1-BnaDAR
- ensembl GSBRNA2T00119266001
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0051603 | IEA | InterPro | proteolysis involved in cellular protein catabolic process | |
| GO:0006284 | IEA | InterPro | base-excision repair | |
| GO:0043161 | IEA | InterPro | proteasome-mediated ubiquitin-dependent protein catabolic process | |
| GO:0006289 | IEA | InterPro | nucleotide-excision repair | |
| GO:0006281 | IEA | InterPro | DNA repair | |
| GO:0006511 | ISO | PLAZA Integrative Orthology | ubiquitin-dependent protein catabolic process | AT1G77440 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003684 | IEA | InterPro | damaged DNA binding | |
| GO:0008534 | IEA | InterPro | oxidized purine nucleobase lesion DNA N-glycosylase activity | |
| GO:0003824 | IEA | InterPro | catalytic activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005839 | IEA | InterPro | proteasome core complex | |
| GO:0019774 | IEA | InterPro | proteasome core complex, beta-subunit complex | |
| GO:0000502 | ISO | PLAZA Integrative Orthology | proteasome complex | AT1G77440 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR001353 | Proteasome, subunit alpha/beta |
| IPR003265 | HhH-GPD domain |
| IPR029055 | Nucleophile aminohydrolases, N-terminal |
| IPR033811 | Proteasome beta 3 subunit |
| IPR023170 | Helix-hairpin-helix, base-excision DNA repair, C-terminal |
| IPR012904 | 8-oxoguanine DNA glycosylase, N-terminal |
| IPR011257 | DNA glycosylase |
| Mapman id | Description |
|---|---|
| 14.5.2 | DNA damage response.base excision repair (BER).oxoguanine DNA glycosylase (OGG1) |
| 19.2.5.1.2.3 | Protein homeostasis.ubiquitin-proteasome system.26S proteasome.20S core particle.beta-type components.component beta type-3 |