Gene: Sopen11g009470

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen11g009470
  • Transcript Identifier Sopen11g009470.1
  • Gene Type Coding gene
  • Location Spenn-ch11 : 9389266-9398302 : negative

Gene Family Information

  • ID HOM05D002121
  • #Genes/#Species 315/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen11g009470.1

Descriptions

  • Description Encodes 8-oxoguanine-DNA glycosylase. DNA repair enzyme. | 8-oxoguanine-DNA glycosylase 1 (OGG1) | FUNCTIONS IN: oxidized purine base lesion DNA N-glycosylase activity | INVOLVED IN: DNA repair, base-excision repair | LOCATED IN: chloroplast | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 14 growth stages | CONTAINS InterPro DOMAIN/s: DNA glycosylase , Helix-hairpin-helix DNA-binding motif, class 1 , Transcription factor TFIID, C-terminal/DNA glycosylase, N-terminal , 8-oxoguanine DNA glycosylase, N-terminal , HhH-GPD domain
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006289
IEA
InterPronucleotide-excision repair
GO:0006284
IEA
InterProbase-excision repair
GO:0006281
IEA
InterProDNA repair
GO:0043161
ISO
PLAZA Homology (enrichment)proteasome-mediated ubiquitin-dependent protein catabolic process HOM05D002121
GO:0051603
ISO
PLAZA Homology (enrichment)proteolysis involved in cellular protein catabolic process HOM05D002121

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003684
IEA
InterProdamaged DNA binding
GO:0008534
IEA
InterProoxidized purine nucleobase lesion DNA N-glycosylase activity
GO:0003824
IEA
InterProcatalytic activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005839
ISO
PLAZA Homology (enrichment)proteasome core complex HOM05D002121
GO:0019774
ISO
PLAZA Homology (enrichment)proteasome core complex, beta-subunit complex HOM05D002121

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR012904 8-oxoguanine DNA glycosylase, N-terminal
IPR023170 Helix-hairpin-helix, base-excision DNA repair, C-terminal
IPR003265 HhH-GPD domain
IPR011257 DNA glycosylase
Mapman id Description
14.5.2 DNA damage response.base excision repair (BER).oxoguanine DNA glycosylase (OGG1)