Gene: Solyc11g018510.2
General Information
Structural Information
- Species Solanum lycopersicum
- Gene Identifier Solyc11g018510.2
- Transcript Identifier Solyc11g018510.2.1
- Gene Type Coding gene
- Location SL4.0ch11 : 8722390-8731308 : negative
Gene Family Information
- ID HOM05D002121
- #Genes/#Species 315/100
- Phylogenetic origin
- ID ORTHO05D008891
- #Genes/#Species 113/93
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Solyc11g018510.2.1
- uniprot A0A3Q7JKD2
- gene_id Solyc11g018510
Descriptions
- Description N-glycosylase/DNA lyase OGG1 (AHRD V3.3 *** A0A2G3AYU0_CAPCH)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0051603 | ISO | PLAZA Homology (enrichment) | proteolysis involved in cellular protein catabolic process | HOM05D002121 |
| GO:0043161 | ISO | PLAZA Homology (enrichment) | proteasome-mediated ubiquitin-dependent protein catabolic process | HOM05D002121 |
| GO:0006285 | IBA | GOA Database | base-excision repair, AP site formation | |
| GO:0006289 | IEA | GOA Database | nucleotide-excision repair | |
| GO:0006289 | IEA | InterPro | nucleotide-excision repair | |
| GO:0006284 | IEA | GOA Database | base-excision repair | |
| GO:0006284 | IEA | InterPro | base-excision repair | |
| GO:0006974 | IEA | GOA Database | cellular response to DNA damage stimulus | |
| GO:0006281 | IEA | GOA Database | DNA repair | |
| GO:0006281 | IEA | InterPro | DNA repair |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003684 | IEA | GOA Database | damaged DNA binding | |
| GO:0003684 | IEA | InterPro | damaged DNA binding | |
| GO:0034039 | IBA | GOA Database | 8-oxo-7,8-dihydroguanine DNA N-glycosylase activity | |
| GO:0008534 | IEA | GOA Database | oxidized purine nucleobase lesion DNA N-glycosylase activity | |
| GO:0008534 | IEA | InterPro | oxidized purine nucleobase lesion DNA N-glycosylase activity | |
| GO:0003824 | IEA | GOA Database | catalytic activity | |
| GO:0003824 | IEA | InterPro | catalytic activity | |
| GO:0016787 | IEA | GOA Database | hydrolase activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0019774 | ISO | PLAZA Homology (enrichment) | proteasome core complex, beta-subunit complex | HOM05D002121 |
| GO:0005839 | ISO | PLAZA Homology (enrichment) | proteasome core complex | HOM05D002121 |
| GO:0005634 | IBA | GOA Database | nucleus |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 14.5.2 | DNA damage response.base excision repair (BER).oxoguanine DNA glycosylase (OGG1) |