Gene: Solyc11g018510.2

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc11g018510.2
  • Transcript Identifier Solyc11g018510.2.1
  • Gene Type Coding gene
  • Location SL4.0ch11 : 8722390-8731308 : negative

Gene Family Information

  • ID HOM05D002121
  • #Genes/#Species 315/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc11g018510.2.1
  • uniprot A0A3Q7JKD2
  • gene_id Solyc11g018510

Descriptions

  • Description N-glycosylase/DNA lyase OGG1 (AHRD V3.3 *** A0A2G3AYU0_CAPCH)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0051603
ISO
PLAZA Homology (enrichment)proteolysis involved in cellular protein catabolic process HOM05D002121
GO:0043161
ISO
PLAZA Homology (enrichment)proteasome-mediated ubiquitin-dependent protein catabolic process HOM05D002121
GO:0006285
IBA
GOA Databasebase-excision repair, AP site formation
GO:0006289
IEA
GOA Databasenucleotide-excision repair
GO:0006289
IEA
InterPronucleotide-excision repair
GO:0006284
IEA
GOA Databasebase-excision repair
GO:0006284
IEA
InterProbase-excision repair
GO:0006974
IEA
GOA Databasecellular response to DNA damage stimulus
GO:0006281
IEA
GOA DatabaseDNA repair
GO:0006281
IEA
InterProDNA repair

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003684
IEA
GOA Databasedamaged DNA binding
GO:0003684
IEA
InterProdamaged DNA binding
GO:0034039
IBA
GOA Database8-oxo-7,8-dihydroguanine DNA N-glycosylase activity
GO:0008534
IEA
GOA Databaseoxidized purine nucleobase lesion DNA N-glycosylase activity
GO:0008534
IEA
InterProoxidized purine nucleobase lesion DNA N-glycosylase activity
GO:0003824
IEA
GOA Databasecatalytic activity
GO:0003824
IEA
InterProcatalytic activity
GO:0016787
IEA
GOA Databasehydrolase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0019774
ISO
PLAZA Homology (enrichment)proteasome core complex, beta-subunit complex HOM05D002121
GO:0005839
ISO
PLAZA Homology (enrichment)proteasome core complex HOM05D002121
GO:0005634
IBA
GOA Databasenucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR011257 DNA glycosylase
IPR003265 HhH-GPD domain
IPR012904 8-oxoguanine DNA glycosylase, N-terminal
Mapman id Description
14.5.2 DNA damage response.base excision repair (BER).oxoguanine DNA glycosylase (OGG1)