Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
SGA_v2.0_scaffold24G10436 scaffold24 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG7G5680 LG-7 + View
Acer truncatum Atru.chr13.1516 chr13 - View
Actinidia chinensis Actinidia21304 Lachesis_group28 + View
Actinidia chinensis Actinidia15230 Lachesis_group26 + View
Actinidia chinensis Actinidia03419 Lachesis_group27 + View
Arabidopsis lyrata AL2G37640 scaffold_2 + View
Arabidopsis lyrata AL1G34880 scaffold_1 + View
Avicennia marina MSTRG.1425 ScioBoG_102833_HRSCAF_103052 + View
Avicennia marina MSTRG.25368 ScioBoG_4119_HRSCAF_4138 + View
Aquilegia oxysepala Aqoxy6G00260 CHR06 - View
Arabidopsis thaliana AT1G21710 8-oxoguanine-DNA glycosylase 1 Encodes 8-oxoguanine-DNA glycosylase. DNA repair enzyme. 8-oxoguanine-DNA glycosylase 1 (OGG1)%3B FUNCTIONS IN: oxidized purine base lesion DNA N-glycosylase activity%3B INVOLVED IN: DNA repair%2C base-excision repair%3B LOCATED IN: chloroplast%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 14 growth stages%3B CONTAINS InterPro DOMAIN/s: DNA glycosylase (InterPro:IPR011257)%2C Helix-hairpin-helix DNA-binding motif%2C class 1 (InterPro:IPR003583)%2C Transcription factor TFIID%2C C-terminal/DNA glycosylase%2C N-terminal (InterPro:IPR012294)%2C 8-oxoguanine DNA glycosylase%2C N-terminal (InterPro:IPR012904)%2C HhH-GPD domain (InterPro:IPR003265)%3B Has 951 Blast hits to 936 proteins in 417 species: Archae - 106%3B Bacteria - 332%3B Metazoa - 176%3B Fungi - 163%3B Plants - 46%3B Viruses - 0%3B Other Eukaryotes - 128 (source: NCBI BLink). Chr1 + View
Brassica carinata BcaC05g26090 ChrC05 + View
Brassica carinata BcaB07g32168 ChrB07 + View
Brassica carinata BcaC07g39113 ChrC07 + View
Brassica napus A06p17800 A06 + View
Brassica napus A07p14950 A07 - View
Brassica napus C05p20690 C05 + View
Brassica napus A02p21280 A02 + View
Brassica oleracea BolC8t49739H C8 + View
Brassica oleracea BolC2t09484H C2 + View
Brassica oleracea BolC5t30768H C5 + View
Brassica rapa BraA06t24872Z A06 + View
Brassica rapa BraA02t07146Z A02 + View
Brassica rapa BraA08t34814Z A08 - View
Camellia sinensis var. sinensis CSS0005687 PREDICTED: proteasome subunit beta type-3-A [Sesamum indicum] Chr9 - View
Camellia sinensis var. sinensis CSS0020897 PREDICTED: proteasome subunit beta type-3-A [Sesamum indicum] Chr4 - View
Cicer arietinum L. Ca_16577_v3 Ca_LG5_v3 - View
Coffea canephora Cc10_g12240 Proteasome subunit beta type-3-A chr10 - View
Citrus clementina Ciclev10002515m.g scaffold_5 - View
Cardamine hirsuta CARHR022070 8-oxoguanine DNA glycosylase Chr1 + View
Cardamine hirsuta CARHR070960 Proteasome subunit beta type Chr2 + View
Carya illinoinensis CiPaw.15G034100 K03660 - N-glycosylase/DNA lyase (OGG1) Chr15 + View
Citrullus lanatus ClCG08G005890 Proteasome subunit beta type CG_Chr08 - View
Cucumis melo MELO3C010637.2 N-glycosylase/DNA lyase OGG1 chr03 + View
Carica papaya Cpa.g.sc64.119 supercontig_64 - View
Capsella rubella Carub.0001s2115 K03660 - N-glycosylase/DNA lyase (OGG1) scaffold_1 + View
Cucumis sativus L. CsaV3_6G034200 N-glycosylase/DNA lyase chr6 + View
Daucus carota DCAR_003564 hypothetical protein DCARv2_Chr1 - View
Davidia involucrata Dinv27284 GWHABJS00000002 - View
Davidia involucrata Dinv14644 GWHABJS00000011 - View
Durio zibethinus Duzib116G0378 NW_019167949.1 - View
Durio zibethinus Duzib041G0810 NW_019167826.1 - View
Durio zibethinus Duzib093G0305 NW_019167937.1 + View
Erigeron canadensis ECA246G4340 Conyza_canadensis_scaffold:8 - View
Eucalyptus grandis Eucgr.F03811 Chr06 - View
Eucalyptus grandis Eucgr.F04339 Chr06 + View
Eutrema salsugineum Thhalv10008793m.g K02735 - 20S proteasome subunit beta 3 (PSMB3) scaffold_5 - View
Fragaria x ananassa FAN15G3634 K02735 - 20S proteasome subunit beta 3 (PSMB3) Fvb2-4 - View
Fragaria x ananassa FAN24G0685 PTHR10242:SF2 - N-GLYCOSYLASE/DNA LYASE Fvb2-2 + View
Fragaria vesca FvH4_2g27460 K02735 - 20S proteasome subunit beta 3 (PSMB3) Fvb2 - View
Gossypium hirsutum Gohir.A05G237100 K03660 - N-glycosylase/DNA lyase (OGG1) A05 - View
Gossypium hirsutum Gohir.D05G239200 K03660 - N-glycosylase/DNA lyase (OGG1) D05 - View
Gossypium hirsutum Gohir.A06G046300 K02735 - 20S proteasome subunit beta 3 (PSMB3) A06 - View
Gossypium hirsutum Gohir.A02G072200 K02735 - 20S proteasome subunit beta 3 (PSMB3) A02 + View
Gossypium hirsutum Gohir.D06G046700 K02735 - 20S proteasome subunit beta 3 (PSMB3) D06 - View
Gossypium hirsutum Gohir.D02G079400 K02735 - 20S proteasome subunit beta 3 (PSMB3) D02 + View
Glycine max Glyma.13G031200 K02735 - 20S proteasome subunit beta 3 (PSMB3) Gm13 - View
Glycine max Glyma.14G152900 K02735 - 20S proteasome subunit beta 3 (PSMB3) Gm14 - View
Gossypium raimondii Gorai.005G088700 Chr05 + View
Gossypium raimondii Gorai.009G248000 Chr09 - View
Gossypium raimondii Gorai.010G052100 Chr10 - View
Lupinus albus Lalb_Chr23g0271041 K02735 - 20S proteasome subunit beta 3 (PSMB3) Lalb_Chr23 + View
Lotus japonicus Lj1g0016880 K03660 - N-glycosylase/DNA lyase (OGG1) chr1 + View
Lotus japonicus Lj1g0026115 K02735 - 20S proteasome subunit beta 3 (PSMB3) chr1 + View
Lonicera japonica Lj4A634T18 GWHAAZE00000004 - View
Lonicera japonica Lj7A344T50 GWHAAZE00000007 - View
Malus domestica MD15G1344700 proteasome beta subunit C1 Chr15 + View
Manihot esculenta Manes.02G166400 Chromosome02 - View
Manihot esculenta Manes.18G079800 Chromosome18 - View
Medicago truncatula Medtr3g088510 8-oxoguanine-DNA glycosylase chr3 - View
Nelumbo nucifera Nn5g28369 chr5 - View
Nicotiana tabacum Nitab4.5_0000111g0140 HhH-GPD domain, DNA glycosylase, Helix-turn-helix, base-excision DNA repair, C-terminal, 8-oxoguanine DNA glycosylase, N-terminal Nitab4.5_0000111 + View
Olea europaea Oeu059454.1 chr14 - View
Petunia axillaris Peaxi162Scf00310g00513 N-glycosylase/DNA lyase Peaxi162Scf00310 + View
Prunus persica Prupe.1G492700 K03660 - N-glycosylase/DNA lyase (OGG1) Pp01 + View
Pisum sativum Psat5g086080 8-oxoguanine DNA glycosylase + N-terminal domain chr5LG3 + View
Papaver somniferum PSO170G0582 NC_039360.1 - View
Populus trichocarpa Potri.002G080800 K02735 - 20S proteasome subunit beta 3 (PSMB3) Chr02 + View
Populus trichocarpa Potri.005G180500 K02735 - 20S proteasome subunit beta 3 (PSMB3) Chr05 - View
Phaseolus vulgaris Phvul.001G072000 K02735 - 20S proteasome subunit beta 3 (PSMB3) Chr01 + View
Phaseolus vulgaris Phvul.009G127600 Chr09 - View
Quercus lobata QL09p033741 9 + View
Rosa chinensis RcHm_v2.0_Chr6g0296301 RcHm_v2.0_Chr6 - View
Rhododendron simsii Rhsim06G0101000 chr06 + View
Rhododendron simsii Rhsim11G0070000 chr11 - View
Salix brachista Sabra02G0063300 GWHAAZH00000002 + View
Salix brachista Sabra05G0136500 GWHAAZH00000005 - View
Sechium edule Sed0022381 LG01 + View
Schrenkiella parvula Sp1g19270 K03660 - N-glycosylase/DNA lyase (OGG1) ch1-1 + View
Solanum tuberosum PGSC0003DMG400009246 8-oxoguanine DNA glycosylase ST4.03ch11 + View
Selenicereus undatus Hund26793 Scaffold_2055 + View
Selenicereus undatus Hund17311 Scaffold_33675 - View
Trochodendron aralioides TAR376G0507 group14 + View
Tarenaya hassleriana THA.LOC104813671 proteasome subunit beta type-3-A-like isoform X1 NW_010965373.1 - View
Tarenaya hassleriana THA.LOC104807028 proteasome subunit beta type-3-A-like NW_010962392.1 + View
Tarenaya hassleriana THA.LOC104800211 proteasome subunit beta type-3-A isoform X1 NW_010969032.1 - View
Tripterygium wilfordii TWI60G0392 NC_052246.1 + View
Vaccinium macrocarpon vmacro00852 Similar to OGG1: N-glycosylase/DNA lyase OGG1 (Arabidopsis thaliana OX%3D3702) chr1_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo0647G0803 CM024073.1 + View
Vigna mungo VMungo1309G2347 CM024072.1 - View
Vitis vinifera GSVIVG01008832001 chr18 + View