Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold273G46430 Striga asiatica HOM05D005565 ORTHO05D402892 2.4e-142 508.8 260 100.0
SGA_v2.0_scaffold74G24562 Striga asiatica HOM05D005565 ORTHO05D401758 2.9e-71 272.7 190 80.5
SGA_v2.0_scaffold13G06749 Striga asiatica HOM05D002333 ORTHO05D002485 9.2e-17 91.7 71 64.8
SGA_v2.0_scaffold1G00240 Striga asiatica HOM05D005565 ORTHO05D006950 2.7e-16 90.1 52 88.5
Oeu041100.1 Olea europaea HOM05D005565 ORTHO05D006950 2.3e-15 87.0 83 61.4
SGA_v2.0_scaffold223G42860 Striga asiatica HOM05D005565 ORTHO05D006950 2.3e-15 87.0 83 62.7
Oeu015183.1 Olea europaea HOM05D005565 ORTHO05D006950 6.6e-15 85.5 83 60.2
unitig_21.g20207 Utricularia gibba HOM05D003481 ORTHO05D004001 8.6e-15 85.1 52 82.7
Migut.H01333 Erythranthe guttata HOM05D005565 ORTHO05D006950 1.9e-14 84.0 83 61.4
MSTRG.14795 Avicennia marina HOM05D005565 ORTHO05D006950 4.3e-14 82.8 83 59.0
VMungo0251G3128 Vigna mungo HOM05D005565 ORTHO05D006950 7.3e-14 82.0 118 46.6
Gohir.A10G003700 Gossypium hirsutum HOM05D005565 ORTHO05D006950 1.2e-13 81.3 120 48.3
Gohir.D10G003700 Gossypium hirsutum HOM05D005565 ORTHO05D006950 1.2e-13 81.3 120 48.3
Gorai.011G004100 Gossypium raimondii HOM05D005565 ORTHO05D006950 1.2e-13 81.3 120 48.3
Lj4g0020694 Lotus japonicus HOM05D005565 ORTHO05D006950 2.8e-13 80.1 85 56.5
Duzib192G0128 Durio zibethinus HOM05D005565 ORTHO05D006950 6.2e-13 79.0 119 47.9
Thecc.06G001100 Theobroma cacao HOM05D005565 ORTHO05D006950 8.0e-13 78.6 118 47.5
Manes.06G055100 Manihot esculenta HOM05D005565 ORTHO05D006950 1.1e-12 78.2 118 47.5
COL.COLO4_26828 Corchorus olitorius HOM05D005565 ORTHO05D006950 1.4e-12 77.8 119 47.1
Dinv06439 Davidia involucrata HOM05D005565 ORTHO05D006950 1.4e-12 77.8 120 49.2
Lj1A1162G46 Lonicera japonica HOM05D005565 ORTHO05D006950 1.8e-12 77.4 85 57.6
DCAR_027864 Daucus carota HOM05D005565 ORTHO05D006950 2.3e-12 77.0 101 51.5
Phvul.002G100900 Phaseolus vulgaris HOM05D005565 ORTHO05D006950 3.1e-12 76.6 118 44.9
Sabra16G0245100 Salix brachista HOM05D005565 ORTHO05D006950 3.1e-12 76.6 135 47.4
Glyma.07G224200 Glycine max HOM05D005565 ORTHO05D006950 4.0e-12 76.3 88 55.7
Sabra11G0084800 Salix brachista HOM05D005565 ORTHO05D006950 4.0e-12 76.3 82 59.8
Sabra11G0091000 Salix brachista HOM05D005565 ORTHO05D006950 4.0e-12 76.3 82 59.8
ECA240G3173 Erigeron canadensis HOM05D005565 ORTHO05D006950 6.8e-12 75.5 56 73.2
Aqoxy1G01543 Aquilegia oxysepala HOM05D005565 ORTHO05D006950 8.9e-12 75.1 85 52.9
FAN16G1178 Fragaria x ananassa HOM05D005565 ORTHO05D006950 8.9e-12 75.1 123 44.7
FAN21G3355 Fragaria x ananassa HOM05D005565 ORTHO05D006950 8.9e-12 75.1 123 44.7
Hma1.2p1_0333F.1_g128300 Hydrangea macrophylla HOM05D005565 ORTHO05D006950 8.9e-12 75.1 87 56.3
Dinv23083 Davidia involucrata HOM05D005565 ORTHO05D006950 1.2e-11 74.7 103 51.5
QL05p061027 Quercus lobata HOM05D005565 ORTHO05D006950 1.2e-11 74.7 119 45.4
Atru.chr10.872 Acer truncatum HOM05D005565 ORTHO05D006950 1.5e-11 74.3 83 57.8
Haze_05807 Corylus avellana HOM05D005565 ORTHO05D006950 1.5e-11 74.3 120 48.3
Glyma.20G024100 Glycine max HOM05D005565 ORTHO05D006950 1.5e-11 74.3 107 47.7
CiPaw.10G085900 Carya illinoinensis HOM05D005565 ORTHO05D006950 2.0e-11 73.9 120 49.2
Potri.011G098100 Populus trichocarpa HOM05D005565 ORTHO05D006950 2.0e-11 73.9 83 57.8
GSVIVG01021628001 Vitis vinifera HOM05D005565 ORTHO05D006950 2.0e-11 73.9 54 72.2
arahy.Tifrunner.gnm1.ann1.V3UUHR Arachis hypogaea HOM05D005565 ORTHO05D006950 2.6e-11 73.6 104 48.1
Cpa.g.sc17.91 Carica papaya HOM05D005565 ORTHO05D006950 2.6e-11 73.6 83 57.8
CsaV3_6G052300 Cucumis sativus L. HOM05D005565 ORTHO05D006950 2.6e-11 73.6 118 46.6
Nn3g20239 Nelumbo nucifera HOM05D005565 ORTHO05D006950 2.6e-11 73.6 85 56.5
TWI53G0754 Tripterygium wilfordii HOM05D005565 ORTHO05D006950 2.6e-11 73.6 118 45.8
Cfa000824 Carpinus fangiana HOM05D005565 ORTHO05D006950 3.4e-11 73.2 139 42.4
Eucgr.D00186 Eucalyptus grandis HOM05D005565 ORTHO05D006950 3.4e-11 73.2 83 56.6
Medtr4g083380 Medicago truncatula HOM05D005565 ORTHO05D006950 3.4e-11 73.2 54 70.4
THA.LOC104812687 Tarenaya hassleriana HOM05D005565 ORTHO05D006950 3.4e-11 73.2 120 45.8
arahy.Tifrunner.gnm1.ann1.59WFQY Arachis hypogaea HOM05D005565 ORTHO05D006950 4.4e-11 72.8 104 48.1
MD10G1253700 Malus domestica HOM05D005565 ORTHO05D006950 4.4e-11 72.8 134 45.5
Psat7g132960 Pisum sativum HOM05D005565 ORTHO05D006950 4.4e-11 72.8 87 54.0
ClCG01G025100 Citrullus lanatus HOM05D005565 ORTHO05D006950 5.8e-11 72.4 118 45.8
FvH4_3g10030 Fragaria vesca HOM05D005565 ORTHO05D006950 5.8e-11 72.4 123 43.9
FAN11G0475 Fragaria x ananassa HOM05D005565 ORTHO05D006950 5.8e-11 72.4 123 43.9
Lsat_1_v5_gn_1_117781 Lactuca sativa HOM05D005565 ORTHO05D006950 5.8e-11 72.4 106 45.3
Manes.14G122600 Manihot esculenta HOM05D005565 ORTHO05D006950 5.8e-11 72.4 120 44.2
CSS0026797 Camellia sinensis var. sinensis HOM05D005565 ORTHO05D006950 7.5e-11 72.0 118 44.9
CANSAT35G0106 Cannabis sativa HOM05D005565 ORTHO05D006950 7.5e-11 72.0 120 45.8
CANSAT35G0536 Cannabis sativa HOM05D005565 ORTHO05D006950 7.5e-11 72.0 120 45.8
Cc09_g08070 Coffea canephora HOM05D005565 ORTHO05D006950 9.8e-11 71.6 59 66.1
Potri.001G372600 Populus trichocarpa HOM05D005565 ORTHO05D006950 9.8e-11 71.6 119 49.6
SHI20681 Sapria himalayana HOM05D005565 ORTHO05D006950 9.8e-11 71.6 118 44.9
Aa31LG6G11740 Aethionema arabicum HOM05D005565 ORTHO05D006950 1.3e-10 71.2 54 70.4
AL1G44510 Arabidopsis lyrata HOM05D005565 ORTHO05D006950 1.3e-10 71.2 57 66.7
Prupe.4G089800 Prunus persica HOM05D005565 ORTHO05D006950 1.3e-10 71.2 85 55.3
Sc17g0004650 Simmondsia chinensis HOM05D005565 ORTHO05D006950 1.3e-10 71.2 94 52.1
Ca_18788_v3 Cicer arietinum L. HOM05D005565 ORTHO05D006950 1.7e-10 70.9 83 55.4
MELO3C007079.2 Cucumis melo HOM05D005565 ORTHO05D006950 1.7e-10 70.9 117 45.3
Actinidia13472 Actinidia chinensis HOM05D005565 ORTHO05D006950 2.2e-10 70.5 122 45.1
PSO541G0264 Papaver somniferum HOM05D005565 ORTHO05D006950 2.2e-10 70.5 85 50.6
PSO675G3222 Papaver somniferum HOM05D005565 ORTHO05D006950 2.2e-10 70.5 85 50.6
PGR083G1318 Punica granatum HOM05D005565 ORTHO05D006950 2.2e-10 70.5 85 54.1
ATR0165G027 Amborella trichopoda HOM05D005565 ORTHO05D006950 2.9e-10 70.1 86 53.5
MBI10_g00722_MAGBIO Magnolia biondii HOM05D005565 ORTHO05D006950 3.7e-10 69.7 85 50.6
MD05G1274000 Malus domestica HOM05D005565 ORTHO05D006950 3.7e-10 69.7 134 44.0
Os01g0526100 Oryza sativa ssp. japonica HOM05D005565 ORTHO05D006950 3.7e-10 69.7 83 55.4
RcHm_v2.0_Chr5g0015891 Rosa chinensis HOM05D005565 ORTHO05D006950 3.7e-10 69.7 123 43.1
Sp1g26320 Schrenkiella parvula HOM05D005565 ORTHO05D006950 3.7e-10 69.7 55 67.3
TAR626G1362 Trochodendron aralioides HOM05D005565 ORTHO05D006950 6.4e-10 68.9 85 49.4
BcaNung05265 Brassica carinata HOM05D005565 ORTHO05D006950 1.1e-09 68.2 52 65.4
A08p24410 Brassica napus HOM05D005565 ORTHO05D006950 1.1e-09 68.2 52 69.2
C03p76800 Brassica napus HOM05D005565 ORTHO05D006950 1.1e-09 68.2 52 69.2
BraA08t34396Z Brassica rapa HOM05D005565 ORTHO05D006950 1.1e-09 68.2 52 69.2
CARHR029890 Cardamine hirsuta HOM05D005565 ORTHO05D006950 1.1e-09 68.2 120 42.5
HPP92_019891 Vanilla planifolia HOM05D005565 ORTHO05D006950 1.1e-09 68.2 83 54.2
AagrBONN_evm.TU.Sc2ySwM_228.4814 Anthoceros agrestis HOM05D005565 ORTHO05D006950 1.4e-09 67.8 55 65.5
A09p35980 Brassica napus HOM05D005565 ORTHO05D006950 1.4e-09 67.8 52 69.2
BraA09t39122Z Brassica rapa HOM05D005565 ORTHO05D006950 1.4e-09 67.8 52 69.2
Thhalv10007861m.g Eutrema salsugineum HOM05D005565 ORTHO05D006950 1.4e-09 67.8 121 41.3
SEGI_17605 Sequoiadendron giganteum HOM05D005565 ORTHO05D006950 1.4e-09 67.8 86 52.3
AT1G30480 Arabidopsis thaliana HOM05D005565 ORTHO05D006950 1.9e-09 67.4 58 63.8
Carub.0001s2870 Capsella rubella HOM05D005565 ORTHO05D006950 2.4e-09 67.0 125 44.0
EL10Ac8g19576 Beta vulgaris HOM05D005565 ORTHO05D006950 3.2e-09 66.6 91 50.5
BcaB07g32657 Brassica carinata HOM05D005565 ORTHO05D006950 3.2e-09 66.6 52 69.2
BcaB07g32683 Brassica carinata HOM05D005565 ORTHO05D006950 3.2e-09 66.6 52 69.2
C05p29480 Brassica napus HOM05D005565 ORTHO05D006950 3.2e-09 66.6 52 69.2
BolC5t31678H Brassica oleracea HOM05D005565 ORTHO05D006950 3.2e-09 66.6 52 69.2
MBI18_g10581_MAGBIO Magnolia biondii HOM05D005565 ORTHO05D006950 3.2e-09 66.6 84 48.8
CAN.G954.26 Capsicum annuum HOM05D005565 ORTHO05D006950 4.1e-09 66.2 87 52.9
FAN25G2018 Fragaria x ananassa HOM05D005565 ORTHO05D006950 4.1e-09 66.2 53 66.0
Sed0002078 Sechium edule HOM05D005565 ORTHO05D006950 4.1e-09 66.2 118 44.1
BcaNung05264 Brassica carinata HOM05D005565 ORTHO05D006950 5.4e-09 65.9 52 67.3
BolC3t19934H Brassica oleracea HOM05D005565 ORTHO05D006950 5.4e-09 65.9 52 67.3
Zm00001eb315350 Zea mays HOM05D005565 ORTHO05D006950 7.0e-09 65.5 84 52.4
Zm00001eb376390 Zea mays HOM05D005565 ORTHO05D006950 7.0e-09 65.5 84 52.4
CDE10G1222 Ceratophyllum demersum HOM05D005565 ORTHO05D006950 2.1e-08 63.9 52 65.4
Pp3c2_18610 Physcomitrium patens HOM05D005565 ORTHO05D006950 3.5e-08 63.2 61 57.4
Rhsim13G0120300 Rhododendron simsii HOM05D005565 ORTHO05D006950 6.0e-08 62.4 83 55.4
SMO351G0200 Selaginella moellendorffii HOM05D005565 ORTHO05D006950 7.8e-08 62.0 54 66.7
vmacro03395 Vaccinium macrocarpon HOM05D005565 ORTHO05D006950 2.3e-07 60.5 86 52.3
vmacro03441 Vaccinium macrocarpon HOM05D005565 ORTHO05D006950 2.3e-07 60.5 86 52.3
PGSC0003DMG400021191 Solanum tuberosum HOM05D005565 ORTHO05D006950 3.0e-07 60.1 94 46.8
HanXRQChr01g0003371 Helianthus annuus HOM05D005565 ORTHO05D006950 3.9e-07 59.7 63 54.0
Nitab4.5_0004596g0030 Nicotiana tabacum HOM05D005565 ORTHO05D006950 3.9e-07 59.7 92 46.7
Mapoly0023s0048 Marchantia polymorpha HOM05D005565 ORTHO05D006950 5.0e-07 59.3 104 43.3
Sopen02g018950 Solanum pennellii HOM05D005565 ORTHO05D006950 6.6e-07 58.9 97 45.4
BcaC01g00198 Brassica carinata HOM05D005565 ORTHO05D006950 1.1e-06 58.2 47 66.0
Solyc02g069790.3 Solanum lycopersicum HOM05D005565 ORTHO05D006950 1.1e-06 58.2 99 44.4


User provided reference genes

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