Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold219G42523 Striga asiatica HOM05D001366 ORTHO05D005449 3.4e-95 351.7 177 100.0
Migut.N01147 Erythranthe guttata HOM05D001366 ORTHO05D005449 9.6e-50 200.7 105 95.2
SGA_v2.0_scaffold337G49194 Striga asiatica HOM05D001366 ORTHO05D005449 2.8e-49 199.1 104 96.2
SalBow3G1925 Salvia bowleyana HOM05D001366 ORTHO05D005449 6.2e-49 198.0 105 93.3
SalBow6G3832 Salvia bowleyana HOM05D001366 ORTHO05D005449 2.4e-48 196.1 105 92.4
SalBow6G5818 Salvia bowleyana HOM05D001366 ORTHO05D005449 2.4e-48 196.1 105 92.4
MSTRG.5323 Avicennia marina HOM05D001366 ORTHO05D005449 1.5e-47 193.4 105 90.5
MSTRG.27758 Avicennia marina HOM05D001366 ORTHO05D005449 4.4e-47 191.8 105 91.4
MSTRG.16686 Avicennia marina HOM05D001366 ORTHO05D005449 9.9e-47 190.7 108 86.1
unitig_22.g6842 Utricularia gibba HOM05D001366 ORTHO05D005449 1.1e-45 187.2 104 87.5
Cc10_g08370 Coffea canephora HOM05D001366 ORTHO05D005449 1.2e-44 183.7 105 85.7
Oeu040884.1 Olea europaea HOM05D001366 ORTHO05D005449 2.7e-44 182.6 105 86.7
Hma1.2p1_0125F.1_g058680 Hydrangea macrophylla HOM05D001366 ORTHO05D005449 3.5e-44 182.2 105 85.7
Nitab4.5_0000354g0080 Nicotiana tabacum HOM05D001366 ORTHO05D005449 3.5e-44 182.2 105 84.8
Nitab4.5_0000885g0060 Nicotiana tabacum HOM05D001366 ORTHO05D005449 4.6e-44 181.8 105 84.8
Peaxi162Scf00160g00913 Petunia axillaris HOM05D001366 ORTHO05D005449 4.6e-44 181.8 105 84.8
CSS0026904 Camellia sinensis var. sinensis HOM05D001366 ORTHO05D005449 6.0e-44 181.4 105 84.8
DCAR_006444 Daucus carota HOM05D001366 ORTHO05D005449 6.0e-44 181.4 105 84.8
TAR625G0060 Trochodendron aralioides HOM05D001366 ORTHO05D005449 6.0e-44 181.4 105 85.7
CSS0031876 Camellia sinensis var. sinensis HOM05D001366 ORTHO05D005449 7.8e-44 181.0 105 82.9
THA.LOC104815469 Tarenaya hassleriana HOM05D001366 ORTHO05D005449 7.8e-44 181.0 105 84.8
PGSC0003DMG400002052 Solanum tuberosum HOM05D001366 ORTHO05D005449 1.0e-43 180.6 105 84.8
A01p15810 Brassica napus HOM05D001366 ORTHO05D003220 1.3e-43 180.3 106 82.1
BraA01t01516Z Brassica rapa HOM05D001366 ORTHO05D003220 1.3e-43 180.3 106 82.1
COL.COLO4_35286 Corchorus olitorius HOM05D001366 ORTHO05D005449 1.7e-43 179.9 105 83.8
Atru.chr11.619 Acer truncatum HOM05D001366 ORTHO05D005449 2.3e-43 179.5 105 83.8
Aa31LG4G9540 Aethionema arabicum HOM05D001366 ORTHO05D005449 2.3e-43 179.5 105 83.8
BcaC06g32884 Brassica carinata HOM05D001366 ORTHO05D005449 2.3e-43 179.5 105 83.8
BolC7t45851H Brassica oleracea HOM05D001366 ORTHO05D005449 2.3e-43 179.5 105 83.8
Carub.0007s1663 Capsella rubella HOM05D001366 ORTHO05D005449 2.3e-43 179.5 105 83.8
CAN.G1104.8 Capsicum annuum HOM05D001366 ORTHO05D005449 2.3e-43 179.5 105 83.8
Ciclev10002917m.g Citrus clementina HOM05D001366 ORTHO05D005449 2.3e-43 179.5 105 84.8
Solyc12g088030.2 Solanum lycopersicum HOM05D001366 ORTHO05D005449 2.3e-43 179.5 105 83.8
Sopen12g030060 Solanum pennellii HOM05D001366 ORTHO05D005449 2.3e-43 179.5 105 83.8
Lsat_1_v5_gn_6_107360 Lactuca sativa HOM05D001366 ORTHO05D005449 3.0e-43 179.1 121 73.6
Manes.18G057000 Manihot esculenta HOM05D001366 ORTHO05D005449 3.0e-43 179.1 105 83.8
PGR042G3224 Punica granatum HOM05D001366 ORTHO05D005449 3.0e-43 179.1 105 82.9
Prupe.1G536300 Prunus persica HOM05D001366 ORTHO05D005449 3.9e-43 178.7 105 82.9
AL7G28780 Arabidopsis lyrata HOM05D001366 ORTHO05D005449 5.1e-43 178.3 105 82.9
AT4G24440 Arabidopsis thaliana HOM05D001366 ORTHO05D005449 5.1e-43 178.3 105 82.9
BcaNung05637 Brassica carinata HOM05D001366 ORTHO05D005449 5.1e-43 178.3 105 82.9
A03p55290 Brassica napus HOM05D001366 ORTHO05D005449 5.1e-43 178.3 105 82.9
C07p53590 Brassica napus HOM05D001366 ORTHO05D005449 5.1e-43 178.3 105 82.9
BraA03t14588Z Brassica rapa HOM05D001366 ORTHO05D005449 5.1e-43 178.3 105 82.9
CiPaw.07G162800 Carya illinoinensis HOM05D001366 ORTHO05D005449 5.1e-43 178.3 105 83.8
Thhalv10026637m.g Eutrema salsugineum HOM05D001366 ORTHO05D005449 5.1e-43 178.3 105 82.9
Sp7g22400 Schrenkiella parvula HOM05D001366 ORTHO05D005449 5.1e-43 178.3 105 82.9
Aqoxy6G00666 Aquilegia oxysepala HOM05D001366 ORTHO05D005449 6.6e-43 177.9 105 81.9
BcaC09g50868 Brassica carinata HOM05D001366 ORTHO05D003220 6.6e-43 177.9 114 76.3
C01p19760 Brassica napus HOM05D001366 ORTHO05D003220 6.6e-43 177.9 114 76.3
BolC1t01904H Brassica oleracea HOM05D001366 ORTHO05D003220 6.6e-43 177.9 114 76.3
PSO700G0345 Papaver somniferum HOM05D001366 ORTHO05D005449 6.6e-43 177.9 105 83.8
GSVIVG01009213001 Vitis vinifera HOM05D001366 ORTHO05D005449 6.6e-43 177.9 105 82.9
Glyma.14G183100 Glycine max HOM05D001366 ORTHO05D005449 8.7e-43 177.6 105 82.9
Nn1g05642 Nelumbo nucifera HOM05D001366 ORTHO05D005449 8.7e-43 177.6 105 82.9
PSO013G0324 Papaver somniferum HOM05D001366 ORTHO05D005449 8.7e-43 177.6 105 83.8
Psat2g064960 Pisum sativum HOM05D001366 ORTHO05D005449 8.7e-43 177.6 105 82.9
Actinidia29656 Actinidia chinensis HOM05D001366 ORTHO05D005449 1.1e-42 177.2 105 81.9
PSO832G3977 Papaver somniferum HOM05D001366 ORTHO05D005449 1.1e-42 177.2 105 82.9
Atru.chr13.973 Acer truncatum HOM05D001366 ORTHO05D005449 1.5e-42 176.8 105 81.9
Aqoxy2G03242 Aquilegia oxysepala HOM05D001366 ORTHO05D005449 1.5e-42 176.8 105 81.9
FAN04G2369 Fragaria x ananassa HOM05D001366 ORTHO05D005449 1.5e-42 176.8 105 81.0
Glyma.02G216100 Glycine max HOM05D001366 ORTHO05D005449 1.5e-42 176.8 105 81.9
LjContig00408g0006754 Lotus japonicus HOM05D001366 ORTHO05D005449 1.5e-42 176.8 105 81.9
Phvul.008G183300 Phaseolus vulgaris HOM05D001366 ORTHO05D005449 1.5e-42 176.8 105 81.9
CARHR231830 Cardamine hirsuta HOM05D001366 ORTHO05D005449 1.9e-42 176.4 105 81.9
Sed0016266 Sechium edule HOM05D001366 ORTHO05D005449 1.9e-42 176.4 105 81.0
ATR0691G175 Amborella trichopoda HOM05D001366 ORTHO05D005449 2.5e-42 176.0 105 81.9
A08p21460 Brassica napus HOM05D001366 ORTHO05D005449 2.5e-42 176.0 105 81.9
BolC8t48576H Brassica oleracea HOM05D001366 ORTHO05D005449 2.5e-42 176.0 105 81.9
BraA08t34095Z Brassica rapa HOM05D001366 ORTHO05D005449 2.5e-42 176.0 105 81.9
Gohir.D05G220900 Gossypium hirsutum HOM05D001366 ORTHO05D005449 2.5e-42 176.0 104 82.7
Gorai.009G228000 Gossypium raimondii HOM05D001366 ORTHO05D005449 2.5e-42 176.0 104 82.7
Gorai.009G278800 Gossypium raimondii HOM05D001366 ORTHO05D005449 2.5e-42 176.0 105 82.9
Lalb_Chr08g0242611 Lupinus albus HOM05D001366 ORTHO05D005449 2.5e-42 176.0 105 82.9
MBI19_g32700_MAGBIO Magnolia biondii HOM05D001366 ORTHO05D005449 2.5e-42 176.0 105 81.0
PSO761G0276 Papaver somniferum HOM05D001366 ORTHO05D005449 2.5e-42 176.0 105 82.9
CANSAT25G2801 Cannabis sativa HOM05D001366 ORTHO05D005449 3.3e-42 175.6 105 81.9
Sed0015347 Sechium edule HOM05D001366 ORTHO05D005449 3.3e-42 175.6 105 80.0
Thecc.08G074000 Theobroma cacao HOM05D001366 ORTHO05D005449 3.3e-42 175.6 105 81.9
CiPaw.08G057200 Carya illinoinensis HOM05D001366 ORTHO05D005449 4.3e-42 175.3 105 81.9
FvH4_5g34180 Fragaria vesca HOM05D001366 ORTHO05D005449 4.3e-42 175.3 105 81.0
FAN18G2982 Fragaria x ananassa HOM05D001366 ORTHO05D005449 4.3e-42 175.3 105 81.0
Rhsim07G0213700 Rhododendron simsii HOM05D001366 ORTHO05D005449 4.3e-42 175.3 105 81.0
Hund07854 Selenicereus undatus HOM05D001366 ORTHO05D005449 4.3e-42 175.3 105 82.9
Eucgr.F00436 Eucalyptus grandis HOM05D001366 ORTHO05D005449 5.6e-42 174.9 105 81.9
Lalb_Chr11g0064851 Lupinus albus HOM05D001366 ORTHO05D005449 5.6e-42 174.9 105 81.9
MELO3C008106.2 Cucumis melo HOM05D001366 ORTHO05D005449 7.3e-42 174.5 105 79.0
Medtr7g005540 Medicago truncatula HOM05D001366 ORTHO05D005449 7.3e-42 174.5 105 80.0
TWI09G0135 Tripterygium wilfordii HOM05D001366 ORTHO05D005449 7.3e-42 174.5 104 81.7
Duzib041G0019 Durio zibethinus HOM05D001366 ORTHO05D005449 9.6e-42 174.1 105 80.0
Gohir.A05G264200 Gossypium hirsutum HOM05D001366 ORTHO05D005449 9.6e-42 174.1 105 81.9
HanXRQChr10g0277741 Helianthus annuus HOM05D001366 ORTHO05D005449 9.6e-42 174.1 105 80.0
Potri.005G151700 Populus trichocarpa HOM05D001366 ORTHO05D005449 9.6e-42 174.1 105 81.0
THA.LOC104799853 Tarenaya hassleriana HOM05D001366 ORTHO05D005449 9.6e-42 174.1 105 81.0
TWI73G1055 Tripterygium wilfordii HOM05D001366 ORTHO05D005449 9.6e-42 174.1 104 81.7
EL10Ac8g20405 Beta vulgaris HOM05D001366 ORTHO05D005449 1.3e-41 173.7 105 80.0
Cpa.g.sc21.43 Carica papaya HOM05D001366 ORTHO05D005449 1.3e-41 173.7 104 81.7
Haze_22489 Corylus avellana HOM05D001366 ORTHO05D005449 1.3e-41 173.7 105 81.0
ECA240G3991 Erigeron canadensis HOM05D001366 ORTHO05D005449 1.3e-41 173.7 104 82.7
Gohir.D05G266700 Gossypium hirsutum HOM05D001366 ORTHO05D005449 1.3e-41 173.7 105 81.9
Lalb_Chr23g0269931 Lupinus albus HOM05D001366 ORTHO05D005449 1.3e-41 173.7 105 81.0
Os05g0107700 Oryza sativa ssp. japonica HOM05D001366 ORTHO05D005449 1.3e-41 173.7 105 81.9
TPR.G15622 Trifolium pratense HOM05D001366 ORTHO05D005449 1.3e-41 173.7 110 76.4
EL10Ac9g20840 Beta vulgaris HOM05D001366 ORTHO05D005449 1.6e-41 173.3 105 81.0
CsaV3_2G033370 Cucumis sativus L. HOM05D001366 ORTHO05D005449 1.6e-41 173.3 105 78.1
HPP92_010288 Vanilla planifolia HOM05D001366 ORTHO05D005449 1.6e-41 173.3 104 80.8
ClCG11G014700 Citrullus lanatus HOM05D001366 ORTHO05D005449 2.1e-41 172.9 105 79.0
RcHm_v2.0_Chr7g0233761 Rosa chinensis HOM05D001366 ORTHO05D005449 2.1e-41 172.9 105 80.0
CsaV3_2G033350 Cucumis sativus L. HOM05D001366 ORTHO05D005449 2.8e-41 172.6 105 79.0
arahy.Tifrunner.gnm1.ann1.8785AP Arachis hypogaea HOM05D001366 ORTHO05D005449 3.6e-41 172.2 105 79.0
arahy.Tifrunner.gnm1.ann1.CRNC3Y Arachis hypogaea HOM05D001366 ORTHO05D005449 3.6e-41 172.2 105 79.0
arahy.Tifrunner.gnm1.ann1.HU70H8 Arachis hypogaea HOM05D001366 ORTHO05D005449 3.6e-41 172.2 105 79.0
Ah.01g003970 Amaranthus hybridus HOM05D001366 ORTHO05D005449 6.2e-41 171.4 105 80.0
Zm00001eb139900 Zea mays HOM05D001366 ORTHO05D005449 6.2e-41 171.4 104 80.8
arahy.Tifrunner.gnm1.ann1.T41BVH Arachis hypogaea HOM05D001366 ORTHO05D005449 8.1e-41 171.0 105 79.0
HanXRQChr03g0063191 Helianthus annuus HOM05D001366 ORTHO05D005449 8.1e-41 171.0 104 80.8
Zm00001eb356100 Zea mays HOM05D001366 ORTHO05D005449 1.1e-40 170.6 104 78.8
Os01g0970500 Oryza sativa ssp. japonica HOM05D001366 ORTHO05D005449 5.3e-40 168.3 104 78.8
Gohir.A05G216500 Gossypium hirsutum HOM05D001366 ORTHO05D005449 6.9e-40 167.9 114 75.4
TPR.G38776 Trifolium pratense HOM05D001366 ORTHO05D005449 1.5e-39 166.8 104 77.9
TWI56G0439 Tripterygium wilfordii HOM05D001366 ORTHO05D005449 3.4e-39 165.6 105 78.1
Rhsim02G0071900 Rhododendron simsii HOM05D001366 ORTHO05D005449 5.8e-39 164.9 121 70.2
Medtr5g066740 Medicago truncatula HOM05D001366 ORTHO05D005449 2.2e-38 162.9 104 76.0
ECA246G1742 Erigeron canadensis HOM05D001366 ORTHO05D005449 5.4e-37 158.3 123 65.0
Oeu038169.3 Olea europaea HOM05D001366 ORTHO05D005449 7.1e-37 157.9 163 57.1
Sabra05G0119200 Salix brachista HOM05D001366 ORTHO05D005449 9.3e-37 157.5 130 64.6
Actinidia19254 Actinidia chinensis HOM05D001366 ORTHO05D005449 6.0e-36 154.8 105 68.6
AUR62017035 Chenopodium quinoa HOM05D001366 ORTHO05D005449 3.0e-35 152.5 92 81.5
Psat0s2399g0160 Pisum sativum HOM05D001366 ORTHO05D005449 6.6e-35 151.4 104 69.2
SHI29728 Sapria himalayana HOM05D001366 ORTHO05D005449 1.1e-34 150.6 104 74.0
MD08G1203900 Malus domestica HOM05D001366 ORTHO05D005449 4.3e-34 148.7 92 78.3
Lsat_1_v5_gn_7_43741 Lactuca sativa HOM05D001366 ORTHO05D005449 5.6e-34 148.3 87 81.6
TAR381G0322 Trochodendron aralioides HOM05D001366 ORTHO05D005449 8.1e-33 144.4 105 69.5
Mapoly0012s0108 Marchantia polymorpha HOM05D001366 ORTHO05D005449 4.5e-31 138.7 105 58.1
Pp3c9_10830 Physcomitrium patens HOM05D001366 ORTHO05D005449 7.6e-31 137.9 104 59.6
Duzib116G0949 Durio zibethinus HOM05D001366 ORTHO05D005449 1.3e-30 137.1 105 66.7
Pp3c15_13540 Physcomitrium patens HOM05D001366 ORTHO05D005449 1.7e-30 136.7 104 58.7
AagrBONN_evm.TU.Sc2ySwM_228.5579 Anthoceros agrestis HOM05D001366 ORTHO05D005449 4.9e-30 135.2 105 57.1
AagrBONN_evm.TU.Sc2ySwM_228.3950 Anthoceros agrestis HOM05D001366 ORTHO05D005449 2.4e-29 132.9 105 57.1
SMO169G0007 Selaginella moellendorffii HOM05D001366 ORTHO05D005449 2.1e-28 129.8 104 56.7
Migut.B00439 Erythranthe guttata HOM05D001366 ORTHO05D005449 1.5e-26 123.6 105 58.1
unitig_8.g3420 Utricularia gibba HOM05D001366 ORTHO05D005449 4.0e-24 115.5 93 63.4
Actinidia19617 Actinidia chinensis HOM05D001366 ORTHO05D005449 9.0e-24 114.4 69 79.7
Lsat_1_v5_gn_4_60280 Lactuca sativa HOM05D001366 ORTHO05D005449 3.4e-23 112.5 66 81.8
RcHm_v2.0_Chr5g0012851 Rosa chinensis HOM05D001366 ORTHO05D005449 3.4e-23 112.5 105 54.3
Dinv42590 Davidia involucrata HOM05D001366 ORTHO05D005449 4.5e-23 112.1 69 81.2
QL09p018667 Quercus lobata HOM05D001366 ORTHO05D005449 3.2e-21 105.9 60 88.3
vmacro04625 Vaccinium macrocarpon HOM05D001366 ORTHO05D005449 5.5e-21 105.1 60 86.7
Ca_08744_v3 Cicer arietinum L. HOM05D001366 ORTHO05D005449 9.3e-21 104.4 60 86.7
VMungo0647G1399 Vigna mungo HOM05D001366 ORTHO05D005449 9.3e-21 104.4 60 86.7
Haze_27711 Corylus avellana HOM05D001366 ORTHO05D005449 5.1e-19 98.6 99 45.5
AagrBONN_evm.TU.Sc2ySwM_368.1269 Anthoceros agrestis HOM05D001366 ORTHO05D005449 2.5e-18 96.3 105 45.7
BcaC08g43388 Brassica carinata HOM05D001366 ORTHO05D005449 1.1e-16 90.9 84 56.0
C06p07570 Brassica napus HOM05D001366 ORTHO05D005449 6.9e-16 88.2 105 53.3
BolC6t35845H Brassica oleracea HOM05D001366 ORTHO05D005449 6.9e-16 88.2 105 53.3
Mapoly0067s0078 Marchantia polymorpha HOM05D001366 ORTHO05D005449 3.4e-15 85.9 79 48.1
HanXRQChr05g0143271 Helianthus annuus HOM05D001366 ORTHO05D005449 7.6e-15 84.7 51 80.4
Cre10.g424150 Chlamydomonas reinhardtii HOM05D001366 ORTHO05D005449 1.7e-14 83.6 100 38.0
AUR62014838 Chenopodium quinoa HOM05D001366 ORTHO05D005449 2.2e-14 83.2 62 69.4
Lsat_1_v5_gn_8_150280 Lactuca sativa HOM05D001675 ORTHO05D004161 1.3e-11 73.9 47 76.6
PRCOL_00001724 Prasinoderma coloniale HOM05D001366 ORTHO05D005449 3.7e-09 65.9 110 31.8
HanXRQChr11g0353851 Helianthus annuus HOM05D001366 ORTHO05D005449 3.1e-08 62.8 36 77.8
Lsat_1_v5_gn_8_45161 Lactuca sativa HOM05D001675 ORTHO05D001808 2.0e-07 60.1 38 78.9
TAR374G0947 Trochodendron aralioides HOM05D000025 ORTHO05D000040 3.8e-06 55.8 34 70.6


User provided reference genes

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