Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold165G38254 Striga asiatica HOM05D002725 ORTHO05D003279 2.2e-168 595.5 294 100.0
SalBow2G2496 Salvia bowleyana HOM05D002725 ORTHO05D003279 2.1e-38 163.7 116 73.3
Potri.002G176000 Populus trichocarpa HOM05D002725 ORTHO05D003279 1.1e-37 161.4 119 72.3
Hma1.2p1_0867F.1_g230300 Hydrangea macrophylla HOM05D002725 ORTHO05D003279 1.8e-37 160.6 119 73.1
Glyma.19G082500 Glycine max HOM05D002725 ORTHO05D003279 4.1e-37 159.5 119 72.3
Sabra02G0137700 Salix brachista HOM05D002725 ORTHO05D003279 4.1e-37 159.5 119 72.3
Glyma.16G063000 Glycine max HOM05D002725 ORTHO05D003279 5.3e-37 159.1 119 72.3
Rhsim12G0121500 Rhododendron simsii HOM05D002725 ORTHO05D003279 5.3e-37 159.1 119 72.3
Gohir.A03G140600 Gossypium hirsutum HOM05D002725 ORTHO05D003279 6.9e-37 158.7 119 71.4
Gohir.D02G163400 Gossypium hirsutum HOM05D002725 ORTHO05D003279 6.9e-37 158.7 119 71.4
Gorai.005G183400 Gossypium raimondii HOM05D002725 ORTHO05D003279 6.9e-37 158.7 119 71.4
GSVIVG01020223001 Vitis vinifera HOM05D002725 ORTHO05D003279 6.9e-37 158.7 119 73.1
Ca_06608_v3 Cicer arietinum L. HOM05D002725 ORTHO05D003279 9.0e-37 158.3 119 72.3
Dinv24871 Davidia involucrata HOM05D002725 ORTHO05D003279 1.2e-36 157.9 119 72.3
Phvul.003G041300 Phaseolus vulgaris HOM05D002725 ORTHO05D003279 1.2e-36 157.9 119 70.6
CiPaw.14G100600 Carya illinoinensis HOM05D002725 ORTHO05D003279 1.5e-36 157.5 119 70.6
Ca_25613_v3 Cicer arietinum L. HOM05D002725 ORTHO05D003279 2.0e-36 157.1 119 70.6
Psat3g161280 Pisum sativum HOM05D002725 ORTHO05D003279 2.0e-36 157.1 119 70.6
QL03p061701 Quercus lobata HOM05D002725 ORTHO05D003279 2.0e-36 157.1 119 70.6
CDE11G0115 Ceratophyllum demersum HOM05D002725 ORTHO05D003279 3.4e-36 156.4 119 71.4
Eucgr.H02616 Eucalyptus grandis HOM05D002725 ORTHO05D003279 3.4e-36 156.4 118 70.3
Prupe.5G061600 Prunus persica HOM05D002725 ORTHO05D003279 3.4e-36 156.4 118 70.3
Prupe.6G220500 Prunus persica HOM05D002725 ORTHO05D003279 3.4e-36 156.4 118 70.3
arahy.Tifrunner.gnm1.ann1.JXF13M Arachis hypogaea HOM05D002725 ORTHO05D003279 4.5e-36 156.0 119 71.4
arahy.Tifrunner.gnm1.ann1.LYET28 Arachis hypogaea HOM05D002725 ORTHO05D003279 4.5e-36 156.0 119 71.4
Haze_12164 Corylus avellana HOM05D002725 ORTHO05D003279 4.5e-36 156.0 119 70.6
MD02G1186000 Malus domestica HOM05D002725 ORTHO05D003279 4.5e-36 156.0 118 70.3
VMungo0464G0614 Vigna mungo HOM05D002725 ORTHO05D003279 4.5e-36 156.0 119 69.7
CANSAT56G0776 Cannabis sativa HOM05D002725 ORTHO05D003279 5.9e-36 155.6 117 70.1
Duzib106G0624 Durio zibethinus HOM05D002725 ORTHO05D003279 5.9e-36 155.6 119 70.6
Duzib268G0345 Durio zibethinus HOM05D002725 ORTHO05D003279 5.9e-36 155.6 119 70.6
Nn3g16917 Nelumbo nucifera HOM05D002725 ORTHO05D003279 5.9e-36 155.6 119 71.4
Lalb_Chr22g0360531 Lupinus albus HOM05D002725 ORTHO05D003279 7.6e-36 155.2 119 69.7
Aqoxy3G02968 Aquilegia oxysepala HOM05D002725 ORTHO05D003279 1.0e-35 154.8 119 71.4
CiPaw.05G149700 Carya illinoinensis HOM05D002725 ORTHO05D003279 1.0e-35 154.8 119 70.6
Migut.K01129 Erythranthe guttata HOM05D002725 ORTHO05D003279 1.0e-35 154.8 116 71.6
arahy.Tifrunner.gnm1.ann1.JTBU3D Arachis hypogaea HOM05D002725 ORTHO05D003279 1.7e-35 154.1 119 71.4
arahy.Tifrunner.gnm1.ann1.D69TB6 Arachis hypogaea HOM05D002725 ORTHO05D003279 2.2e-35 153.7 119 70.6
Manes.12G030200 Manihot esculenta HOM05D002725 ORTHO05D003279 2.2e-35 153.7 119 70.6
Ciclev10031363m.g Citrus clementina HOM05D002725 ORTHO05D003279 2.9e-35 153.3 119 69.7
HanXRQChr08g0234721 Helianthus annuus HOM05D002725 ORTHO05D003279 2.9e-35 153.3 119 70.6
Lsat_1_v5_gn_8_158161 Lactuca sativa HOM05D002725 ORTHO05D003279 2.9e-35 153.3 119 71.4
Actinidia01708 Actinidia chinensis HOM05D002725 ORTHO05D003279 3.8e-35 152.9 118 71.2
TPR.G9070 Trifolium pratense HOM05D002725 ORTHO05D003279 3.8e-35 152.9 119 68.1
Mapoly0042s0037 Marchantia polymorpha HOM05D002725 ORTHO05D003279 5.0e-35 152.5 118 69.5
Phvul.008G149300 Phaseolus vulgaris HOM05D002725 ORTHO05D003279 5.0e-35 152.5 119 69.7
PGR119G1015 Punica granatum HOM05D002725 ORTHO05D003279 5.0e-35 152.5 118 70.3
FvH4_1g17710 Fragaria vesca HOM05D002725 ORTHO05D003279 6.5e-35 152.1 119 70.6
FAN23G0685 Fragaria x ananassa HOM05D002725 ORTHO05D003279 6.5e-35 152.1 119 70.6
FAN26G2216 Fragaria x ananassa HOM05D002725 ORTHO05D003279 6.5e-35 152.1 119 70.6
Lsat_1_v5_gn_1_10560 Lactuca sativa HOM05D002725 ORTHO05D003279 8.5e-35 151.8 118 72.0
Pp3c5_26190 Physcomitrium patens HOM05D002725 ORTHO05D003279 1.1e-34 151.4 118 68.6
ATR0680G011 Amborella trichopoda HOM05D002725 ORTHO05D003279 1.4e-34 151.0 119 68.9
DCAR_031095 Daucus carota HOM05D002725 ORTHO05D003279 3.2e-34 149.8 118 70.3
ECA233G4284 Erigeron canadensis HOM05D002725 ORTHO05D003279 3.2e-34 149.8 118 68.6
Cc11_g14540 Coffea canephora HOM05D002725 ORTHO05D003279 5.5e-34 149.1 119 68.1
AagrBONN_evm.TU.Sc2ySwM_368.3392 Anthoceros agrestis HOM05D002725 ORTHO05D003279 9.3e-34 148.3 118 66.1
AUR62005361 Chenopodium quinoa HOM05D002725 ORTHO05D003279 9.3e-34 148.3 117 69.2
AagrBONN_evm.TU.Sc2ySwM_344.2036 Anthoceros agrestis HOM05D002725 ORTHO05D003279 2.1e-33 147.1 118 65.3
MSTRG.7887 Avicennia marina HOM05D002725 ORTHO05D003279 4.6e-33 146.0 117 67.5
Ah.02g129870 Amaranthus hybridus HOM05D002725 ORTHO05D003279 6.1e-33 145.6 117 67.5
Cpa.g.sc824.3 Carica papaya HOM05D002725 ORTHO05D003279 1.0e-32 144.8 119 68.1
ClCG05G025230 Citrullus lanatus HOM05D002725 ORTHO05D003279 1.0e-32 144.8 118 66.1
MELO3C012005.2 Cucumis melo HOM05D002725 ORTHO05D003279 1.0e-32 144.8 118 66.1
CsaV3_5G031650 Cucumis sativus L. HOM05D002725 ORTHO05D003279 1.0e-32 144.8 118 66.1
TPR.G37028 Trifolium pratense HOM05D002725 ORTHO05D003279 1.8e-32 144.1 116 67.2
AUR62014016 Chenopodium quinoa HOM05D002725 ORTHO05D003279 2.3e-32 143.7 95 76.8
TAR629G1020 Trochodendron aralioides HOM05D002725 ORTHO05D003279 3.0e-32 143.3 87 86.2
unitig_22.g6933 Utricularia gibba HOM05D002725 ORTHO05D003279 3.9e-32 142.9 116 64.7
Sed0004453 Sechium edule HOM05D002725 ORTHO05D003279 6.7e-32 142.1 118 64.4
FAN19G1008 Fragaria x ananassa HOM05D002725 ORTHO05D003279 1.1e-31 141.4 85 84.7
MBI10_g36211_MAGBIO Magnolia biondii HOM05D002725 ORTHO05D003279 1.1e-31 141.4 119 68.1
SHI27131 Sapria himalayana HOM05D002725 ORTHO05D003279 3.3e-31 139.8 84 82.1
TPR.G10571 Trifolium pratense HOM05D002725 ORTHO05D003279 3.3e-31 139.8 95 73.7
MBI18_g25085_MAGBIO Magnolia biondii HOM05D002725 ORTHO05D003279 5.7e-31 139.0 119 66.4
Aqoxy3G02785 Aquilegia oxysepala HOM05D002725 ORTHO05D003279 9.7e-31 138.3 84 83.3
EL10Ac6g13658 Beta vulgaris HOM05D002725 ORTHO05D003279 9.7e-31 138.3 84 82.1
CBR_g50945 Chara braunii HOM05D002725 ORTHO05D003279 9.7e-31 138.3 117 62.4
MD15G1297400 Malus domestica HOM05D002725 ORTHO05D003279 9.7e-31 138.3 95 73.7
COL.COLO4_36975 Corchorus olitorius HOM05D002725 ORTHO05D003279 1.6e-30 137.5 119 63.0
DCAR_025614 Daucus carota HOM05D002725 ORTHO05D003279 1.6e-30 137.5 118 67.8
CAN.G1178.23 Capsicum annuum HOM05D002725 ORTHO05D003279 4.8e-30 136.0 119 63.9
Potri.014G102800 Populus trichocarpa HOM05D002725 ORTHO05D003279 4.8e-30 136.0 120 63.3
Solyc08g078430.4 Solanum lycopersicum HOM05D002725 ORTHO05D003279 4.8e-30 136.0 119 63.9
Sopen08g026920 Solanum pennellii HOM05D002725 ORTHO05D003279 4.8e-30 136.0 119 63.9
PGSC0003DMG400004771 Solanum tuberosum HOM05D002725 ORTHO05D003279 4.8e-30 136.0 119 63.9
Nitab4.5_0001381g0050 Nicotiana tabacum HOM05D002725 ORTHO05D003279 6.3e-30 135.6 119 63.0
Nitab4.5_0002289g0110 Nicotiana tabacum HOM05D002725 ORTHO05D003279 6.3e-30 135.6 119 63.0
PSO832G3550 Papaver somniferum HOM05D002725 ORTHO05D003279 6.3e-30 135.6 115 67.0
Peaxi162Scf00301g00128 Petunia axillaris HOM05D002725 ORTHO05D003279 8.2e-30 135.2 119 62.2
Manes.13G031300 Manihot esculenta HOM05D002725 ORTHO05D003279 1.4e-29 134.4 119 63.0
FAN28G0598 Fragaria x ananassa HOM05D002725 ORTHO05D003279 1.8e-29 134.0 119 63.9
RcHm_v2.0_Chr2g0108041 Rosa chinensis HOM05D002725 ORTHO05D003279 1.8e-29 134.0 119 63.9
THA.LOC104812782 Tarenaya hassleriana HOM05D002725 ORTHO05D003279 1.8e-29 134.0 120 64.2
THA.LOC104816751 Tarenaya hassleriana HOM05D002725 ORTHO05D003279 1.8e-29 134.0 120 64.2
SMO139G0072 Selaginella moellendorffii HOM05D002725 ORTHO05D003279 3.1e-29 133.3 118 61.9
PSO063G5148 Papaver somniferum HOM05D002725 ORTHO05D003279 4.1e-29 132.9 119 65.5
PSO832G2366 Papaver somniferum HOM05D002725 ORTHO05D003279 4.1e-29 132.9 119 65.5
Medtr7g037560 Medicago truncatula HOM05D002725 ORTHO05D003279 5.9e-28 129.0 118 59.3
Zm00001eb074440 Zea mays HOM05D002725 ORTHO05D003279 1.7e-27 127.5 119 60.5
Os02g0730100 Oryza sativa ssp. japonica HOM05D002725 ORTHO05D003279 2.9e-27 126.7 126 57.1
COL.COLO4_32664 Corchorus olitorius HOM05D002725 ORTHO05D003279 6.5e-27 125.6 94 72.3
Hund25340 Selenicereus undatus HOM05D002725 ORTHO05D003279 1.9e-26 124.0 119 59.7
Aa31LG2G10130 Aethionema arabicum HOM05D002725 ORTHO05D003279 2.5e-26 123.6 118 61.9
AL2G16480 Arabidopsis lyrata HOM05D002725 ORTHO05D003279 2.5e-26 123.6 119 60.5
Carub.0002s0508 Capsella rubella HOM05D002725 ORTHO05D003279 2.5e-26 123.6 119 60.5
BcaC06g31807 Brassica carinata HOM05D002725 ORTHO05D003279 3.2e-26 123.2 119 58.8
Peaxi162Scf01086g00013 Petunia axillaris HOM05D002725 ORTHO05D003279 4.2e-26 122.9 119 62.2
Sp2g04490 Schrenkiella parvula HOM05D002725 ORTHO05D003279 4.2e-26 122.9 119 60.5
SGA_v2.0_scaffold36G14409 Striga asiatica HOM05D002725 ORTHO05D003279 7.2e-26 122.1 93 74.2
AT1G60170 Arabidopsis thaliana HOM05D002725 ORTHO05D003279 9.4e-26 121.7 119 59.7
CARHR292010 Cardamine hirsuta HOM05D002725 ORTHO05D003279 9.4e-26 121.7 118 60.2
BcaB04g20253 Brassica carinata HOM05D002725 ORTHO05D003279 1.2e-25 121.3 119 58.0
BcaC02g10686 Brassica carinata HOM05D002725 ORTHO05D003279 1.2e-25 121.3 119 58.0
BcaC09g49421 Brassica carinata HOM05D002725 ORTHO05D003279 1.2e-25 121.3 119 58.0
A01p29130 Brassica napus HOM05D002725 ORTHO05D003279 1.2e-25 121.3 119 58.0
BolC1t03648H Brassica oleracea HOM05D002725 ORTHO05D003279 1.2e-25 121.3 119 58.0
BolC4t24141H Brassica oleracea HOM05D002725 ORTHO05D003279 1.2e-25 121.3 119 58.0
BraA01t02981Z Brassica rapa HOM05D002725 ORTHO05D003279 1.2e-25 121.3 119 58.0
Lj1g0003905 Lotus japonicus HOM05D002725 ORTHO05D003279 1.2e-25 121.3 119 58.8
HPP92_018031 Vanilla planifolia HOM05D002725 ORTHO05D003279 2.1e-25 120.6 119 58.0
C01p36870 Brassica napus HOM05D002725 ORTHO05D003279 2.7e-25 120.2 119 58.0
Thecc.02G244300 Theobroma cacao HOM05D002725 ORTHO05D003279 7.9e-25 118.6 119 58.8
CAN.G1178.19 Capsicum annuum HOM05D002725 ORTHO05D003279 1.4e-24 117.9 84 71.4
vmacro16261 Vaccinium macrocarpon HOM05D002725 ORTHO05D003279 1.8e-24 117.5 119 59.7
C05p51290 Brassica napus HOM05D002725 ORTHO05D003279 2.3e-24 117.1 112 59.8
TWI75G1526 Tripterygium wilfordii HOM05D002725 ORTHO05D003279 2.3e-24 117.1 119 58.0
Actinidia08169 Actinidia chinensis HOM05D002725 ORTHO05D003279 5.1e-24 115.9 118 61.0
Thhalv10023432m.g Eutrema salsugineum HOM05D002725 ORTHO05D003279 8.8e-24 115.2 93 68.8
CSS0011985 Camellia sinensis var. sinensis HOM05D002725 ORTHO05D003279 7.4e-23 112.1 119 57.1
CSS0030976 Camellia sinensis var. sinensis HOM05D002725 ORTHO05D003279 7.4e-23 112.1 119 57.1
C04p26660 Brassica napus HOM05D002725 ORTHO05D003279 2.8e-22 110.2 113 56.6
Os04g0555400 Oryza sativa ssp. japonica HOM05D002725 ORTHO05D003279 1.4e-21 107.8 125 52.8
DCAR_027104 Daucus carota HOM05D002725 ORTHO05D003279 1.8e-21 107.5 91 65.9
PGSC0003DMG400019262 Solanum tuberosum HOM05D002725 ORTHO05D003279 2.4e-21 107.1 117 55.6
Os07g0141600 Oryza sativa ssp. japonica HOM05D002725 ORTHO05D003279 6.9e-21 105.5 118 54.2
Nitab4.5_0001219g0140 Nicotiana tabacum HOM05D002725 ORTHO05D003279 1.5e-20 104.4 91 67.0
Solyc07g064070.3 Solanum lycopersicum HOM05D002725 ORTHO05D003279 1.7e-19 100.9 116 54.3
C05p13400 Brassica napus HOM05D002725 ORTHO05D003279 2.2e-19 100.5 123 52.8
BcaC05g25456 Brassica carinata HOM05D002725 ORTHO05D003279 6.5e-19 99.0 129 51.9
BolC5t30077H Brassica oleracea HOM05D002725 ORTHO05D003279 6.5e-19 99.0 129 51.9
Aqoxy1G03248 Aquilegia oxysepala HOM05D002725 ORTHO05D003279 8.5e-19 98.6 86 60.5
AL3G44040 Arabidopsis lyrata HOM05D002725 ORTHO05D003279 1.4e-18 97.8 117 53.8
Sopen07g032210 Solanum pennellii HOM05D002725 ORTHO05D003279 2.5e-18 97.1 114 52.6
Thhalv10009759m.g Eutrema salsugineum HOM05D002725 ORTHO05D003279 3.2e-18 96.7 121 52.1
Nitab4.5_0000368g0220 Nicotiana tabacum HOM05D002725 ORTHO05D003279 5.5e-18 95.9 111 55.9
Sopen01g038100 Solanum pennellii HOM05D002725 ORTHO05D003279 7.2e-18 95.5 114 50.0
PGSC0003DMG400000023 Solanum tuberosum HOM05D002725 ORTHO05D003279 9.4e-18 95.1 124 50.0
A06p11270 Brassica napus HOM05D002725 ORTHO05D003279 1.6e-17 94.4 129 50.4
BraA06t24307Z Brassica rapa HOM05D002725 ORTHO05D003279 1.6e-17 94.4 129 50.4
BcaC05g25461 Brassica carinata HOM05D002725 ORTHO05D003279 4.7e-17 92.8 123 50.4
Duzib248G0107 Durio zibethinus HOM05D002725 ORTHO05D003279 2.0e-15 87.4 61 73.8
FAN18G3093 Fragaria x ananassa HOM05D002725 ORTHO05D003279 2.6e-15 87.0 88 61.4
Migut.N01594 Erythranthe guttata HOM05D002725 ORTHO05D003279 3.3e-15 86.7 118 47.5
Cre10.g424850 Chlamydomonas reinhardtii HOM05D002725 ORTHO05D003279 5.7e-15 85.9 94 51.1
CAN.G337.150 Capsicum annuum HOM05D002725 ORTHO05D003279 9.7e-15 85.1 101 53.5
CAN.G78.53 Capsicum annuum HOM05D002725 ORTHO05D003279 1.3e-14 84.7 104 51.0
Thhalv10003005m.g Eutrema salsugineum HOM05D002725 ORTHO05D003279 1.3e-14 84.7 120 45.8
ECA233G0293 Erigeron canadensis HOM05D002725 ORTHO05D003279 1.2e-12 78.2 60 71.7
AUR62024795 Chenopodium quinoa HOM05D002725 ORTHO05D003279 3.2e-10 70.1 63 58.7
FAN13G3129 Fragaria x ananassa HOM05D002725 ORTHO05D003279 5.5e-10 69.3 39 84.6
TAR371G0609 Trochodendron aralioides HOM05D002725 ORTHO05D003279 7.2e-10 68.9 35 91.4
Solyc01g094300.1 Solanum lycopersicum HOM05D002725 ORTHO05D003279 9.4e-10 68.6 93 47.3
MCO14G503 Micromonas commoda HOM05D002725 ORTHO05D003279 3.6e-09 66.6 90 44.4
PRCOL_00005735 Prasinoderma coloniale HOM05D002725 ORTHO05D003279 3.6e-09 66.6 134 38.8
FAN08G0728 Fragaria x ananassa HOM05D002725 ORTHO05D003279 6.1e-09 65.9 56 58.9
Sed0011360 Sechium edule HOM05D002725 ORTHO05D003279 1.8e-08 64.3 39 76.9
Cfa022852 Carpinus fangiana HOM05D002725 ORTHO05D003279 2.0e-07 60.8 152 31.6
Rhsim12G0147600 Rhododendron simsii HOM05D002725 ORTHO05D003052 2.6e-07 60.5 74 44.6
Haze_26190 Corylus avellana HOM05D002725 ORTHO05D003279 7.5e-07 58.9 94 41.5
Rhsim02G0180300 Rhododendron simsii HOM05D002725 ORTHO05D003279 1.7e-06 57.8 32 78.1
QL06p007601 Quercus lobata HOM05D002725 ORTHO05D003279 3.7e-06 56.6 41 63.4
Rhsim12G0147800 Rhododendron simsii HOM05D000812 ORTHO05D000672 3.7e-06 56.6 40 67.5


User provided reference genes

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