Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold12G06131 Striga asiatica HOM05D000216 ORTHO05D001131 2.9e-91 338.6 172 100.0
SGA_v2.0_scaffold119G32686 Striga asiatica HOM05D000216 ORTHO05D001131 2.7e-09 66.2 37 86.5
PGR111G0080 Punica granatum HOM05D000216 ORTHO05D001131 3.6e-09 65.9 37 83.8
RcHm_v2.0_CPg0502401 Rosa chinensis HOM05D000216 ORTHO05D001131 3.6e-09 65.9 37 83.8
Sc13g0006970 Simmondsia chinensis HOM05D000216 ORTHO05D001131 3.6e-09 65.9 37 83.8
Sc15g0001760 Simmondsia chinensis HOM05D000216 ORTHO05D001131 3.6e-09 65.9 37 83.8
Sc25g0001960 Simmondsia chinensis HOM05D000216 ORTHO05D001131 3.6e-09 65.9 37 83.8
PSO548G0026 Papaver somniferum HOM05D000216 ORTHO05D001131 4.7e-09 65.5 37 81.1
CsaV3_UNG208330 Cucumis sativus L. HOM05D000216 ORTHO05D001131 6.1e-09 65.1 37 81.1
SalBow1G4778 Salvia bowleyana HOM05D000216 ORTHO05D001131 6.1e-09 65.1 37 83.8
arahy.Tifrunner.gnm1.ann1.MIWC4Y Arachis hypogaea HOM05D000216 ORTHO05D001131 8.0e-09 64.7 37 81.1
CAN.G1648.7 Capsicum annuum HOM05D000216 ORTHO05D001131 8.0e-09 64.7 36 86.1
CAN.G1738.7 Capsicum annuum HOM05D000216 ORTHO05D001131 8.0e-09 64.7 36 86.1
CAN.G358.145 Capsicum annuum HOM05D000216 ORTHO05D001131 8.0e-09 64.7 36 86.1
CAN.G892.2 Capsicum annuum HOM05D000216 ORTHO05D001131 8.0e-09 64.7 36 86.1
CAN.G939.17 Capsicum annuum HOM05D000216 ORTHO05D001131 8.0e-09 64.7 36 86.1
Peaxi162Scf00608g00014 Petunia axillaris HOM05D000216 ORTHO05D001131 8.0e-09 64.7 36 86.1
Ca_05611_v3 Cicer arietinum L. HOM05D000216 ORTHO05D001131 1.0e-08 64.3 37 81.1
LjContig00489g0016354 Lotus japonicus HOM05D000216 ORTHO05D001131 1.0e-08 64.3 37 83.8
Ah.01g011550 Amaranthus hybridus HOM05D000216 ORTHO05D001131 1.4e-08 63.9 37 81.1
Ah.09g227320 Amaranthus hybridus HOM05D000216 ORTHO05D001131 1.4e-08 63.9 37 81.1
Ah.10g027590 Amaranthus hybridus HOM05D000216 ORTHO05D001131 1.4e-08 63.9 37 81.1
EL10As12g24016 Beta vulgaris HOM05D000216 ORTHO05D001131 1.4e-08 63.9 37 81.1
EL10As4g23395 Beta vulgaris HOM05D000216 ORTHO05D001131 1.4e-08 63.9 37 81.1
Lj2A1238G119 Lonicera japonica HOM05D000216 ORTHO05D001131 1.4e-08 63.9 36 83.3
Lj2A1239T199 Lonicera japonica HOM05D000216 ORTHO05D001131 1.4e-08 63.9 36 83.3
Lj2C1237G9 Lonicera japonica HOM05D000216 ORTHO05D001131 1.4e-08 63.9 36 83.3
Medtr0002s0510 Medicago truncatula HOM05D000216 ORTHO05D001131 1.4e-08 63.9 37 78.4
Hma1.2p1_0094F.1_g047108 Hydrangea macrophylla HOM05D000216 ORTHO05D001131 1.8e-08 63.5 37 78.4
Nitab4.5_0007104g0040 Nicotiana tabacum HOM05D000216 ORTHO05D001131 2.3e-08 63.2 36 83.3
SalBow2G3505 Salvia bowleyana HOM05D000216 ORTHO05D001131 2.3e-08 63.2 36 83.3
arahy.Tifrunner.gnm1.ann1.J2QZCX Arachis hypogaea HOM05D000216 ORTHO05D001131 3.0e-08 62.8 37 78.4
ClCG10G006060 Citrullus lanatus HOM05D000216 ORTHO05D001131 3.0e-08 62.8 37 78.4
Sed0002232 Sechium edule HOM05D000216 ORTHO05D001131 3.0e-08 62.8 37 78.4
Sed0007596 Sechium edule HOM05D000216 ORTHO05D001131 3.0e-08 62.8 37 78.4
AUR62024083 Chenopodium quinoa HOM05D000216 ORTHO05D001131 3.9e-08 62.4 37 78.4
Medtr4g051130 Medicago truncatula HOM05D000216 ORTHO05D001131 3.9e-08 62.4 37 75.7
Potri.013G142232 Populus trichocarpa HOM05D000216 ORTHO05D001131 3.9e-08 62.4 37 78.4
SabraPtG0001100 Salix brachista HOM05D000216 ORTHO05D001131 3.9e-08 62.4 37 78.4
CAN.G1082.2 Capsicum annuum HOM05D000216 ORTHO05D001131 6.7e-08 61.6 36 80.6
Nn020s41502 Nelumbo nucifera HOM05D000216 ORTHO05D001131 6.7e-08 61.6 37 75.7
Nn082s42674 Nelumbo nucifera HOM05D000216 ORTHO05D001131 6.7e-08 61.6 37 75.7
LjContig00318g0016482 Lotus japonicus HOM05D000216 ORTHO05D001131 8.8e-08 61.2 37 78.4
Lalb_Chr09g0335411 Lupinus albus HOM05D000216 ORTHO05D001131 8.8e-08 61.2 37 78.4
DCAR_032476 Daucus carota HOM05D000216 ORTHO05D001131 1.5e-07 60.5 37 78.4
Ah.10g027890 Amaranthus hybridus HOM05D000216 ORTHO05D001131 2.6e-07 59.7 37 75.7
Ah.10g028290 Amaranthus hybridus HOM05D000216 ORTHO05D001131 2.6e-07 59.7 37 75.7
Gohir.A07G155805 Gossypium hirsutum HOM05D000216 ORTHO05D001131 2.6e-07 59.7 50 62.0
Gohir.D07G126525 Gossypium hirsutum HOM05D000216 ORTHO05D001131 2.6e-07 59.7 37 75.7
Gorai.001G136600 Gossypium raimondii HOM05D000216 ORTHO05D001131 2.6e-07 59.7 37 75.7
HanXRQChr05g0139701 Helianthus annuus HOM05D000216 ORTHO05D001131 2.6e-07 59.7 37 78.4
HanXRQChr11g0326601 Helianthus annuus HOM05D000216 ORTHO05D001131 2.6e-07 59.7 37 78.4
HanXRQChr16g0503971 Helianthus annuus HOM05D000216 ORTHO05D001131 2.6e-07 59.7 37 78.4
HanXRQCPg0579801 Helianthus annuus HOM05D000216 ORTHO05D001131 2.6e-07 59.7 37 78.4
Lsat_1_v5_gn_1_118620 Lactuca sativa HOM05D000216 ORTHO05D001131 2.6e-07 59.7 37 78.4
Lsat_1_v5_gn_1_92840 Lactuca sativa HOM05D000216 ORTHO05D001131 2.6e-07 59.7 37 78.4
Lsat_1_v5_gn_8_1800 Lactuca sativa HOM05D000216 ORTHO05D001131 2.6e-07 59.7 37 78.4
vmacro22402 Vaccinium macrocarpon HOM05D000216 ORTHO05D001131 2.6e-07 59.7 37 75.7
ATR0329G029 Amborella trichopoda HOM05D000216 ORTHO05D001131 4.4e-07 58.9 41 65.9
Migut.H02461 Erythranthe guttata HOM05D000216 ORTHO05D001131 4.4e-07 58.9 34 82.4
Psat7g199200 Pisum sativum HOM05D000216 ORTHO05D001131 4.4e-07 58.9 37 73.0
Solyc10g017920.1 Solanum lycopersicum HOM05D000216 ORTHO05D001131 4.4e-07 58.9 36 77.8
Psat1g084320 Pisum sativum HOM05D000216 ORTHO05D001131 5.7e-07 58.5 52 59.6
QL11p015550 Quercus lobata HOM05D000216 ORTHO05D001131 5.7e-07 58.5 37 75.7
ClCG10G005980 Citrullus lanatus HOM05D000216 ORTHO05D013308 7.4e-07 58.2 40 67.5
Psat0s6357g0040 Pisum sativum HOM05D000216 ORTHO05D001131 1.3e-06 57.4 37 70.3
Psat3g186440 Pisum sativum HOM05D000216 ORTHO05D001131 1.3e-06 57.4 37 70.3
AL2G20930 Arabidopsis lyrata HOM05D000216 ORTHO05D001131 1.7e-06 57.0 37 73.0
BNapus_Darmor_BZH_scaffold_253p00080 Brassica napus HOM05D000216 ORTHO05D001131 1.7e-06 57.0 37 73.0
BolSC45t60940H Brassica oleracea HOM05D000216 ORTHO05D001131 1.7e-06 57.0 37 73.0
BolSC49t61196H Brassica oleracea HOM05D000216 ORTHO05D001131 1.7e-06 57.0 37 73.0
BraSC140t45600Z Brassica rapa HOM05D000216 ORTHO05D001131 1.7e-06 57.0 37 73.0
BraSC140t45606Z Brassica rapa HOM05D000216 ORTHO05D001131 1.7e-06 57.0 37 73.0
BraSC151t45705Z Brassica rapa HOM05D000216 ORTHO05D001131 1.7e-06 57.0 37 73.0
BraSC58t46479Z Brassica rapa HOM05D000216 ORTHO05D001131 1.7e-06 57.0 37 73.0
CARHR281930 Cardamine hirsuta HOM05D000216 ORTHO05D001131 1.7e-06 57.0 37 73.0
Hund08566 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.7e-06 57.0 37 73.0
Hund18042 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.7e-06 57.0 37 73.0
Hund19314 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.7e-06 57.0 37 73.0
Hund23975 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.7e-06 57.0 37 73.0
Hund25935 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.7e-06 57.0 37 73.0
Hund27452 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.7e-06 57.0 37 73.0
Hund27562 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.7e-06 57.0 37 73.0
Hund27608 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.7e-06 57.0 37 73.0
Hund27642 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.7e-06 57.0 37 73.0
Hund27656 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.7e-06 57.0 37 73.0
Hund27670 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.7e-06 57.0 37 73.0
Hund27699 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.7e-06 57.0 37 73.0
Hund27744 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.7e-06 57.0 37 73.0
Hund27763 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.7e-06 57.0 37 73.0
Hund27805 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.7e-06 57.0 37 73.0
Hund27822 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.7e-06 57.0 37 73.0
Hund27840 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.7e-06 57.0 37 73.0
Hund27867 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.7e-06 57.0 37 73.0
Hund27916 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.7e-06 57.0 37 73.0
Hund27998 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.7e-06 57.0 37 73.0
Hund28018 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.7e-06 57.0 37 73.0
Hund28026 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.7e-06 57.0 37 73.0
Hund28058 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.7e-06 57.0 37 73.0
Hund28123 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.7e-06 57.0 37 73.0
Hund28131 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.7e-06 57.0 37 73.0
Hund28139 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.7e-06 57.0 37 73.0
Hund28154 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.7e-06 57.0 37 73.0
Hund28163 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.7e-06 57.0 37 73.0
Hund28189 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.7e-06 57.0 37 73.0
Hund28208 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.7e-06 57.0 37 73.0
Hund28237 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.7e-06 57.0 37 73.0
Hund28247 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.7e-06 57.0 37 73.0
Hund28260 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.7e-06 57.0 37 73.0
Hund28279 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.7e-06 57.0 37 73.0
Hund28336 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.7e-06 57.0 37 73.0
Hund28351 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.7e-06 57.0 37 73.0
Hund28353 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.7e-06 57.0 37 73.0
Hund28385 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.7e-06 57.0 37 73.0
Hund28398 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.7e-06 57.0 37 73.0
Hund28413 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.7e-06 57.0 37 73.0
Hund28500 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.7e-06 57.0 37 73.0
Hund28556 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.7e-06 57.0 37 73.0
Hund28578 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.7e-06 57.0 37 73.0
Hund28618 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.7e-06 57.0 37 73.0
Hund28642 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.7e-06 57.0 37 73.0
Hund28686 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.7e-06 57.0 37 73.0
Hund28697 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.7e-06 57.0 37 73.0
Hund28702 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.7e-06 57.0 37 73.0
Hund28806 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.7e-06 57.0 37 73.0
Hund28824 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.7e-06 57.0 37 73.0
Hund28904 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.7e-06 57.0 37 73.0
Hund28914 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.7e-06 57.0 37 73.0
Hund28984 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.7e-06 57.0 37 73.0
Hund29113 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.7e-06 57.0 37 73.0
Hund29197 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.7e-06 57.0 37 73.0
Hund29207 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.7e-06 57.0 37 73.0
Hund29340 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.7e-06 57.0 37 73.0
Hund29354 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.7e-06 57.0 37 73.0
Hund29389 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.7e-06 57.0 37 73.0
Hund29478 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.7e-06 57.0 37 73.0
Hund29486 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.7e-06 57.0 37 73.0
Hund29645 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.7e-06 57.0 37 73.0
Hund29745 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.7e-06 57.0 37 73.0
Hund30018 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.7e-06 57.0 37 73.0
Hund30063 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.7e-06 57.0 37 73.0
ATCG00190 Arabidopsis thaliana HOM05D000216 ORTHO05D001131 2.2e-06 56.6 37 70.3
Gohir.D12G077902 Gossypium hirsutum HOM05D000216 ORTHO05D001131 2.2e-06 56.6 37 73.0
Gorai.008G086500 Gossypium raimondii HOM05D000216 ORTHO05D001131 2.2e-06 56.6 37 73.0
Psat7g026840 Pisum sativum HOM05D000216 ORTHO05D001131 2.8e-06 56.2 37 67.6
unitig_91.g26498 Utricularia gibba HOM05D000216 ORTHO05D001131 2.8e-06 56.2 37 73.0
VMungo1015G0001 Vigna mungo HOM05D000216 ORTHO05D001131 3.7e-06 55.8 35 71.4
Gohir.D02G042933 Gossypium hirsutum HOM05D000216 ORTHO05D001131 6.3e-06 55.1 37 67.6


User provided reference genes

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