Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_40089 Sequoiadendron giganteum HOM05D005460 ORTHO05D008059 8.5e-114 413.7 210 100.0
QL10p020708 Quercus lobata HOM05D005460 ORTHO05D008059 1.0e-37 161.0 162 53.7
TPR.G14357 Trifolium pratense HOM05D005460 ORTHO05D008059 1.3e-37 160.6 160 53.1
Medtr2g461560 Medicago truncatula HOM05D005460 ORTHO05D008059 2.5e-36 156.4 160 52.5
Migut.I00363 Erythranthe guttata HOM05D005460 ORTHO05D008059 4.2e-36 155.6 167 51.5
Ca_02783_v3 Cicer arietinum L. HOM05D005460 ORTHO05D008059 9.3e-36 154.5 166 51.8
MBI16_g07042_MAGBIO Magnolia biondii HOM05D005460 ORTHO05D008059 9.3e-36 154.5 124 63.7
AagrBONN_evm.TU.Sc2ySwM_344.3544 Anthoceros agrestis HOM05D005460 ORTHO05D008059 1.6e-35 153.7 181 45.9
PSO478G1652 Papaver somniferum HOM05D005460 ORTHO05D008059 3.5e-35 152.5 179 51.4
VMungo1309G0936 Vigna mungo HOM05D005460 ORTHO05D008059 3.5e-35 152.5 166 50.0
BcaB08g37287 Brassica carinata HOM05D005460 ORTHO05D008059 6.0e-35 151.8 168 50.0
Pp3c5_22230 Physcomitrium patens HOM05D005460 ORTHO05D008059 7.9e-35 151.4 130 58.5
SEGI_17125 Sequoiadendron giganteum HOM05D005460 ORTHO05D008059 7.9e-35 151.4 93 84.9
Lj1g0006842 Lotus japonicus HOM05D005460 ORTHO05D008059 1.0e-34 151.0 128 60.2
vmacro17637 Vaccinium macrocarpon HOM05D005460 ORTHO05D008059 1.0e-34 151.0 159 52.2
Phvul.009G203700 Phaseolus vulgaris HOM05D005460 ORTHO05D008059 1.3e-34 150.6 166 50.0
THA.LOC104818356 Tarenaya hassleriana HOM05D005460 ORTHO05D008059 1.3e-34 150.6 165 51.5
Lsat_1_v5_gn_4_113721 Lactuca sativa HOM05D005460 ORTHO05D008059 1.8e-34 150.2 161 49.1
Nitab4.5_0002467g0140 Nicotiana tabacum HOM05D005460 ORTHO05D008059 1.8e-34 150.2 163 51.5
TAR629G3051 Trochodendron aralioides HOM05D005460 ORTHO05D008059 2.3e-34 149.8 127 60.6
Ah.11g047430 Amaranthus hybridus HOM05D005460 ORTHO05D008059 5.1e-34 148.7 118 63.6
Psat1g126760 Pisum sativum HOM05D005460 ORTHO05D008059 5.1e-34 148.7 118 63.6
Aa31LG3G18430 Aethionema arabicum HOM05D005460 ORTHO05D008059 6.7e-34 148.3 165 50.9
Actinidia04798 Actinidia chinensis HOM05D005460 ORTHO05D008059 8.7e-34 147.9 127 58.3
Peaxi162Scf00017g03272 Petunia axillaris HOM05D005460 ORTHO05D008059 8.7e-34 147.9 163 49.7
AL6G18480 Arabidopsis lyrata HOM05D005460 ORTHO05D008059 1.1e-33 147.5 128 60.9
MSTRG.22948 Avicennia marina HOM05D005460 ORTHO05D008059 1.1e-33 147.5 162 51.2
Nitab4.5_0005994g0060 Nicotiana tabacum HOM05D005460 ORTHO05D008059 1.1e-33 147.5 205 45.9
Solyc03g114780.3 Solanum lycopersicum HOM05D005460 ORTHO05D008059 1.1e-33 147.5 174 49.4
Sopen03g033860 Solanum pennellii HOM05D005460 ORTHO05D008059 1.5e-33 147.1 164 51.2
CSS0025897 Camellia sinensis var. sinensis HOM05D005460 ORTHO05D008059 1.9e-33 146.7 160 50.0
Cpa.g.sc3.237 Carica papaya HOM05D005460 ORTHO05D008059 1.9e-33 146.7 127 58.3
Glyma.06G206000 Glycine max HOM05D005460 ORTHO05D008059 1.9e-33 146.7 166 49.4
Prupe.5G209800 Prunus persica HOM05D005460 ORTHO05D008059 1.9e-33 146.7 164 48.2
arahy.Tifrunner.gnm1.ann1.LBS82T Arachis hypogaea HOM05D005460 ORTHO05D008059 2.5e-33 146.4 128 57.8
Ciclev10018555m.g Citrus clementina HOM05D005460 ORTHO05D008059 2.5e-33 146.4 128 59.4
Duzib068G0250 Durio zibethinus HOM05D005460 ORTHO05D008059 2.5e-33 146.4 129 57.4
arahy.Tifrunner.gnm1.ann1.N0CKJ9 Arachis hypogaea HOM05D005460 ORTHO05D008059 3.3e-33 146.0 128 57.8
TWI60G0358 Tripterygium wilfordii HOM05D005460 ORTHO05D008059 4.3e-33 145.6 160 48.1
TWI60G1488 Tripterygium wilfordii HOM05D005460 ORTHO05D008059 4.3e-33 145.6 160 48.1
Cc04_g08300 Coffea canephora HOM05D005460 ORTHO05D008059 5.7e-33 145.2 161 52.8
Manes.06G081200 Manihot esculenta HOM05D005460 ORTHO05D008059 5.7e-33 145.2 121 61.2
Thecc.03G107700 Theobroma cacao HOM05D005460 ORTHO05D008059 5.7e-33 145.2 159 49.1
EL10Ac5g11188 Beta vulgaris HOM05D005460 ORTHO05D008059 7.4e-33 144.8 125 57.6
COL.COLO4_27492 Corchorus olitorius HOM05D005460 ORTHO05D008059 7.4e-33 144.8 128 58.6
Thhalv10012480m.g Eutrema salsugineum HOM05D005460 ORTHO05D008059 7.4e-33 144.8 171 48.5
Lalb_Chr11g0071861 Lupinus albus HOM05D005460 ORTHO05D008059 7.4e-33 144.8 168 50.6
Nn3g17530 Nelumbo nucifera HOM05D005460 ORTHO05D008059 7.4e-33 144.8 128 59.4
GSVIVG01008151001 Vitis vinifera HOM05D005460 ORTHO05D008059 7.4e-33 144.8 160 50.6
A10p28560 Brassica napus HOM05D005460 ORTHO05D008059 9.6e-33 144.4 123 61.0
Gohir.D11G037400 Gossypium hirsutum HOM05D005460 ORTHO05D008059 9.6e-33 144.4 127 57.5
Potri.012G063500 Populus trichocarpa HOM05D005460 ORTHO05D008059 9.6e-33 144.4 127 58.3
Sp6g34850 Schrenkiella parvula HOM05D005460 ORTHO05D008059 9.6e-33 144.4 166 49.4
Hund09954 Selenicereus undatus HOM05D005460 ORTHO05D008059 9.6e-33 144.4 164 47.6
SGA_v2.0_scaffold25G10948 Striga asiatica HOM05D005460 ORTHO05D008059 9.6e-33 144.4 162 49.4
Gorai.007G040200 Gossypium raimondii HOM05D005460 ORTHO05D008059 1.6e-32 143.7 127 57.5
Aqoxy3G00547_Aqoxy3G00548 Aquilegia oxysepala HOM05D005460 ORTHO05D008059 2.1e-32 143.3 160 51.9
Cfa017734 Carpinus fangiana HOM05D005460 ORTHO05D008059 2.1e-32 143.3 161 48.4
Gohir.A11G034000 Gossypium hirsutum HOM05D005460 ORTHO05D008059 2.1e-32 143.3 127 57.5
AT5G08110 Arabidopsis thaliana HOM05D005460 ORTHO05D008059 2.8e-32 142.9 128 59.4
BolC9t59631H Brassica oleracea HOM05D005460 ORTHO05D008059 2.8e-32 142.9 169 49.1
C09p68840 Brassica napus HOM05D005460 ORTHO05D008059 3.7e-32 142.5 165 49.7
Carub.0006s0699 Capsella rubella HOM05D005460 ORTHO05D008059 3.7e-32 142.5 127 59.8
Lj9A438G54 Lonicera japonica HOM05D005460 ORTHO05D008059 8.2e-32 141.4 118 59.3
AUR62032136 Chenopodium quinoa HOM05D005460 ORTHO05D008059 1.1e-31 141.0 161 48.4
CiPaw.15G113700 Carya illinoinensis HOM05D005460 ORTHO05D008059 2.4e-31 139.8 162 48.1
SHI17427 Sapria himalayana HOM05D005460 ORTHO05D008059 2.4e-31 139.8 121 62.0
BraA10t44905Z Brassica rapa HOM05D005460 ORTHO05D008059 4.1e-31 139.0 120 60.8
Dinv07972 Davidia involucrata HOM05D005460 ORTHO05D008059 4.1e-31 139.0 120 60.8
Oeu005512.2 Olea europaea HOM05D005460 ORTHO05D008059 4.1e-31 139.0 107 67.3
MD14G1216300 Malus domestica HOM05D005460 ORTHO05D008059 5.3e-31 138.7 131 53.4
Eucgr.K02548 Eucalyptus grandis HOM05D005460 ORTHO05D008059 6.9e-31 138.3 163 47.9
ATR0827G052 Amborella trichopoda HOM05D005460 ORTHO05D008059 9.0e-31 137.9 121 62.0
RcHm_v2.0_Chr7g0183711 Rosa chinensis HOM05D005460 ORTHO05D008059 2.0e-30 136.7 171 45.0
Haze_18509 Corylus avellana HOM05D005460 ORTHO05D008059 3.4e-30 136.0 116 59.5
HanXRQChr09g0270461 Helianthus annuus HOM05D005460 ORTHO05D008059 3.4e-30 136.0 159 45.9
Sc04g0003880 Simmondsia chinensis HOM05D005460 ORTHO05D008059 2.9e-29 132.9 128 53.9
CANSAT80G0202 Cannabis sativa HOM05D005460 ORTHO05D008059 3.8e-29 132.5 128 53.9
ClCG06G015450 Citrullus lanatus HOM05D005460 ORTHO05D008059 3.8e-29 132.5 128 50.8
MELO3C017248.2 Cucumis melo HOM05D005460 ORTHO05D008059 3.8e-29 132.5 160 47.5
CsaV3_1G003350 Cucumis sativus L. HOM05D005460 ORTHO05D008059 1.1e-28 131.0 160 46.9
CBR_g50975 Chara braunii HOM05D005460 ORTHO05D008059 1.9e-28 130.2 119 57.1
Sed0020336 Sechium edule HOM05D005460 ORTHO05D008059 3.2e-28 129.4 128 52.3
Zm00001eb327130 Zea mays HOM05D005460 ORTHO05D008059 3.2e-28 129.4 118 52.5
HPP92_007735 Vanilla planifolia HOM05D005460 ORTHO05D008059 2.1e-27 126.7 119 53.8
FAN13G3146 Fragaria x ananassa HOM05D005460 ORTHO05D008059 2.7e-27 126.3 128 52.3
PGR031G2062 Punica granatum HOM05D005460 ORTHO05D008059 3.5e-27 125.9 128 51.6
Os02g0111900 Oryza sativa ssp. japonica HOM05D005460 ORTHO05D008059 4.6e-27 125.6 118 50.8
ECA232G2972 Erigeron canadensis HOM05D005460 ORTHO05D008059 6.1e-27 125.2 159 43.4
FAN08G0483 Fragaria x ananassa HOM05D005460 ORTHO05D008059 7.9e-27 124.8 128 51.6
FvH4_5g13410 Fragaria vesca HOM05D005460 ORTHO05D008059 1.0e-26 124.4 128 51.6
Hma1.2p1_2037F.1_g311980 Hydrangea macrophylla HOM05D005460 ORTHO05D008059 4.3e-25 119.0 117 55.6
AUR62039669 Chenopodium quinoa HOM05D005460 ORTHO05D008059 2.2e-24 116.7 177 42.4
FAN18G2313 Fragaria x ananassa HOM05D005460 ORTHO05D008059 4.8e-24 115.5 162 42.6
Psat7g070520 Pisum sativum HOM05D005460 ORTHO05D008059 9.0e-23 111.3 116 52.6
Prupe.5G209300 Prunus persica HOM05D005460 ORTHO05D008059 3.2e-20 102.8 132 47.0
AagrBONN_evm.TU.Sc2ySwM_344.4214 Anthoceros agrestis HOM05D005460 ORTHO05D008059 6.3e-16 88.6 130 40.8
Rhsim08G0141800 Rhododendron simsii HOM05D005460 ORTHO05D008059 1.8e-15 87.0 79 58.2
MCO09G659 Micromonas commoda HOM05D005460 ORTHO05D008059 2.4e-15 86.7 134 44.0
Pp3c7_15450 Physcomitrium patens HOM05D005460 ORTHO05D008059 5.3e-15 85.5 104 44.2
Pp3c7_15456 Physcomitrium patens HOM05D005460 ORTHO05D008059 5.3e-15 85.5 104 44.2
QL01p024738 Quercus lobata HOM05D005460 ORTHO05D008059 5.5e-12 75.5 51 74.5
MCO07G109 Micromonas commoda HOM05D005460 ORTHO05D008059 9.4e-12 74.7 136 39.7
BcaB08g37286 Brassica carinata HOM05D005460 ORTHO05D006058 1.2e-11 74.3 113 40.7
Pp3s405_10 Physcomitrium patens HOM05D005460 ORTHO05D008059 2.7e-11 73.2 108 37.0
Cre03.g187700 Chlamydomonas reinhardtii HOM05D005460 ORTHO05D008059 6.7e-10 68.6 203 29.6
PRCOL_00000536 Prasinoderma coloniale HOM05D005460 ORTHO05D008059 6.7e-10 68.6 144 32.6
SEGI_11059 Sequoiadendron giganteum HOM05D006301 ORTHO05D000646 1.3e-08 64.3 31 100.0
Lsat_1_v5_gn_2_72741 Lactuca sativa HOM05D005460 ORTHO05D000550 4.1e-07 59.3 77 41.6
Lsat_1_v5_gn_2_72781 Lactuca sativa HOM05D005460 ORTHO05D000550 4.1e-07 59.3 77 41.6


User provided reference genes

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