Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_35314 Sequoiadendron giganteum HOM05D006139 ORTHO05D007681 3.0e-235 818.1 421 100.0
Solyc09g098230.3 Solanum lycopersicum HOM05D006139 ORTHO05D007681 4.0e-94 349.4 272 63.6
Sopen09g036170 Solanum pennellii HOM05D006139 ORTHO05D007681 2.0e-93 347.1 272 63.2
QL10p044141 Quercus lobata HOM05D006139 ORTHO05D007681 7.5e-93 345.1 272 64.3
Hma1.2p1_0412F.1_g147150 Hydrangea macrophylla HOM05D006139 ORTHO05D007681 2.2e-92 343.6 272 64.7
CAN.G710.40 Capsicum annuum HOM05D006139 ORTHO05D007681 1.8e-91 340.5 272 63.6
Aqoxy2G03950 Aquilegia oxysepala HOM05D006139 ORTHO05D007681 7.0e-91 338.6 336 56.0
Potri.011G107400 Populus trichocarpa HOM05D006139 ORTHO05D007681 7.0e-91 338.6 301 58.1
Lsat_1_v5_gn_3_24941 Lactuca sativa HOM05D006139 ORTHO05D007681 4.5e-90 335.9 272 61.8
Ciclev10019318m.g Citrus clementina HOM05D006139 ORTHO05D007681 5.9e-90 335.5 272 62.9
ECA246G3778 Erigeron canadensis HOM05D006139 ORTHO05D007681 5.9e-90 335.5 272 61.8
Manes.03G099000 Manihot esculenta HOM05D006139 ORTHO05D007681 5.9e-90 335.5 272 62.1
PSO017G2886 Papaver somniferum HOM05D006139 ORTHO05D007681 7.7e-90 335.1 272 61.8
Dinv44237 Davidia involucrata HOM05D006139 ORTHO05D007681 1.0e-89 334.7 247 66.4
Gohir.A01G052100 Gossypium hirsutum HOM05D006139 ORTHO05D007681 2.9e-89 333.2 247 67.2
Gorai.002G052100 Gossypium raimondii HOM05D006139 ORTHO05D007681 2.9e-89 333.2 247 67.2
TAR365G1167 Trochodendron aralioides HOM05D006139 ORTHO05D007681 2.9e-89 333.2 272 62.5
Cc03_g10570 Coffea canephora HOM05D006139 ORTHO05D007681 3.8e-89 332.8 274 60.6
FvH4_4g12150 Fragaria vesca HOM05D006139 ORTHO05D007681 3.8e-89 332.8 328 53.7
Duzib213G0841 Durio zibethinus HOM05D006139 ORTHO05D007681 5.0e-89 332.4 272 61.4
FAN07G2792 Fragaria x ananassa HOM05D006139 ORTHO05D007681 5.0e-89 332.4 342 52.6
FAN12G2778 Fragaria x ananassa HOM05D006139 ORTHO05D007681 5.0e-89 332.4 328 53.7
PSO675G6876 Papaver somniferum HOM05D006139 ORTHO05D007681 5.0e-89 332.4 272 61.4
Gohir.D01G041500 Gossypium hirsutum HOM05D006139 ORTHO05D007681 6.5e-89 332.0 247 67.2
RcHm_v2.0_Chr4g0409801 Rosa chinensis HOM05D006139 ORTHO05D007681 8.5e-89 331.6 328 54.0
Sabra11G0095200 Salix brachista HOM05D006139 ORTHO05D007681 1.5e-88 330.9 309 56.6
CSS0045945 Camellia sinensis var. sinensis HOM05D006139 ORTHO05D007681 1.9e-88 330.5 247 64.8
FAN17G0552 Fragaria x ananassa HOM05D006139 ORTHO05D007681 1.9e-88 330.5 328 53.4
GSVIVG01031668001 Vitis vinifera HOM05D006139 ORTHO05D007681 2.5e-88 330.1 272 63.6
Eucgr.F03241 Eucalyptus grandis HOM05D006139 ORTHO05D007681 4.2e-88 329.3 272 60.3
Nn3g20967 Nelumbo nucifera HOM05D006139 ORTHO05D007681 5.5e-88 328.9 272 61.0
Thecc.07G123700 Theobroma cacao HOM05D006139 ORTHO05D007681 7.2e-88 328.6 272 61.8
Oeu013397.2 Olea europaea HOM05D006139 ORTHO05D007681 9.4e-88 328.2 272 60.3
TWI38G2388 Tripterygium wilfordii HOM05D006139 ORTHO05D007681 1.2e-87 327.8 272 59.9
arahy.Tifrunner.gnm1.ann1.JAL8JD Arachis hypogaea HOM05D006139 ORTHO05D007681 1.6e-87 327.4 246 64.6
arahy.Tifrunner.gnm1.ann1.46LBLY Arachis hypogaea HOM05D006139 ORTHO05D007681 2.1e-87 327.0 247 64.4
FAN12G0395 Fragaria x ananassa HOM05D006139 ORTHO05D007681 3.6e-87 326.2 301 56.1
Sp1g15110 Schrenkiella parvula HOM05D006139 ORTHO05D007681 6.1e-87 325.5 272 59.6
Thhalv10007085m.g Eutrema salsugineum HOM05D006139 ORTHO05D007681 1.0e-86 324.7 272 59.6
Carub.0001s1670 Capsella rubella HOM05D006139 ORTHO05D007681 1.8e-86 323.9 272 58.1
Prupe.1G178000 Prunus persica HOM05D006139 ORTHO05D007681 1.8e-86 323.9 272 59.9
MD13G1278700 Malus domestica HOM05D006139 ORTHO05D007681 3.0e-86 323.2 247 63.6
CANSAT11G1108 Cannabis sativa HOM05D006139 ORTHO05D007681 4.0e-86 322.8 299 55.2
Sc22g0003230 Simmondsia chinensis HOM05D006139 ORTHO05D007681 6.8e-86 322.0 247 66.4
Rhsim07G0086500 Rhododendron simsii HOM05D006139 ORTHO05D007681 8.8e-86 321.6 302 55.3
ATR0609G005 Amborella trichopoda HOM05D006139 ORTHO05D007681 1.2e-85 321.2 248 61.7
AT1G16970 Arabidopsis thaliana HOM05D006139 ORTHO05D007681 1.5e-85 320.9 272 57.7
A06p12870 Brassica napus HOM05D006139 ORTHO05D007681 2.0e-85 320.5 272 58.8
BraA06t24447Z Brassica rapa HOM05D006139 ORTHO05D007681 2.0e-85 320.5 272 58.8
Migut.N00440 Erythranthe guttata HOM05D006139 ORTHO05D007681 2.0e-85 320.5 271 59.4
PGR031G2404 Punica granatum HOM05D006139 ORTHO05D007681 2.0e-85 320.5 272 59.2
BcaB02g06659 Brassica carinata HOM05D006139 ORTHO05D007681 3.4e-85 319.7 272 58.5
CARHR017480 Cardamine hirsuta HOM05D006139 ORTHO05D007681 3.4e-85 319.7 273 57.5
THA.LOC104812308 Tarenaya hassleriana HOM05D006139 ORTHO05D007681 3.4e-85 319.7 272 59.6
BcaC05g25552 Brassica carinata HOM05D006139 ORTHO05D007681 1.3e-84 317.8 272 57.7
BolC5t30234H Brassica oleracea HOM05D006139 ORTHO05D007681 1.3e-84 317.8 272 57.7
C05p15280 Brassica napus HOM05D006139 ORTHO05D007681 1.7e-84 317.4 274 57.7
MELO3C017678.2 Cucumis melo HOM05D006139 ORTHO05D007681 2.2e-84 317.0 248 62.5
CsaV3_4G003770 Cucumis sativus L. HOM05D006139 ORTHO05D007681 4.8e-84 315.8 248 62.5
Sed0017452 Sechium edule HOM05D006139 ORTHO05D007681 8.3e-84 315.1 248 62.9
MSTRG.17865 Avicennia marina HOM05D006139 ORTHO05D007681 1.8e-83 313.9 247 61.5
CiPaw.01G108300 Carya illinoinensis HOM05D006139 ORTHO05D007681 3.1e-83 313.2 247 63.6
Glyma.20G248800 Glycine max HOM05D006139 ORTHO05D007681 3.1e-83 313.2 247 62.8
Lalb_Chr06g0164661 Lupinus albus HOM05D006139 ORTHO05D007681 4.1e-83 312.8 247 61.9
Hund19684 Selenicereus undatus HOM05D006139 ORTHO05D007681 5.4e-83 312.4 247 63.6
Psat6g243280 Pisum sativum HOM05D006139 ORTHO05D007681 2.0e-82 310.5 247 60.3
SGA_v2.0_scaffold109G31142 Striga asiatica HOM05D006139 ORTHO05D007681 3.5e-82 309.7 245 62.4
TPR.G8868 Trifolium pratense HOM05D006139 ORTHO05D007681 1.0e-81 308.1 245 60.4
Lj5g0023092 Lotus japonicus HOM05D006139 ORTHO05D007681 8.6e-81 305.1 272 56.6
Zm00001eb116810 Zea mays HOM05D006139 ORTHO05D007681 1.1e-80 304.7 244 60.2
AUR62018029 Chenopodium quinoa HOM05D006139 ORTHO05D007681 1.9e-80 303.9 247 61.1
AUR62003718 Chenopodium quinoa HOM05D006139 ORTHO05D007681 1.2e-79 301.2 247 61.5
Phvul.007G001600 Phaseolus vulgaris HOM05D006139 ORTHO05D007681 2.1e-79 300.4 247 59.9
SMO361G0769 Selaginella moellendorffii HOM05D006139 ORTHO05D007681 2.8e-79 300.1 269 57.6
VMungo0720G1636 Vigna mungo HOM05D006139 ORTHO05D007681 6.1e-79 298.9 272 54.4
SMO361G0513 Selaginella moellendorffii HOM05D006139 ORTHO05D007681 1.0e-78 298.1 247 59.9
Medtr1g116980 Medicago truncatula HOM05D006139 ORTHO05D007681 4.4e-77 292.7 249 58.6
COL.COLO4_17513 Corchorus olitorius HOM05D006139 ORTHO05D007681 3.8e-73 279.6 316 51.3
Mapoly0113s0020 Marchantia polymorpha HOM05D006139 ORTHO05D007681 2.8e-71 273.5 343 44.9
vmacro13984 Vaccinium macrocarpon HOM05D006139 ORTHO05D007681 3.9e-65 253.1 272 52.2
SHI27652 Sapria himalayana HOM05D006139 ORTHO05D007681 1.5e-64 251.1 241 52.3
Atru.chr2.2052 Acer truncatum HOM05D006139 ORTHO05D007681 5.6e-64 249.2 185 64.3
MBI07_g00628_MAGBIO Magnolia biondii HOM05D006139 ORTHO05D007681 1.4e-59 234.6 245 54.3
Lj4A728T41 Lonicera japonica HOM05D006139 ORTHO05D007681 5.4e-59 232.6 272 47.8
Peaxi162Scf00286g00443 Petunia axillaris HOM05D006139 ORTHO05D007681 5.4e-59 232.6 164 68.9
AagrBONN_evm.TU.Sc2ySwM_228.1556 Anthoceros agrestis HOM05D006139 ORTHO05D007681 9.2e-59 231.9 303 44.9
Nitab4.5_0001687g0050 Nicotiana tabacum HOM05D006139 ORTHO05D007681 1.7e-57 227.6 160 68.8
Pp3c18_7140 Physcomitrium patens HOM05D006139 ORTHO05D007681 2.3e-54 217.2 305 42.3
DCAR_005495 Daucus carota HOM05D006139 ORTHO05D007681 1.2e-53 214.9 156 67.3
Haze_11079 Corylus avellana HOM05D006139 ORTHO05D007681 2.2e-52 210.7 167 64.7
Aa31LG7G1410 Aethionema arabicum HOM05D006139 ORTHO05D007681 4.1e-51 206.5 233 49.4
ClCG07G016640 Citrullus lanatus HOM05D006139 ORTHO05D007681 4.1e-51 206.5 161 64.0
Os07g0184900 Oryza sativa ssp. japonica HOM05D006139 ORTHO05D007681 6.0e-50 202.6 156 64.7
unitig_578.g15953 Utricularia gibba HOM05D006139 ORTHO05D007681 8.1e-47 192.2 162 58.6
Ca_11423_v3 Cicer arietinum L. HOM05D006139 ORTHO05D007681 4.0e-46 189.9 249 45.4
CBR_g19434 Chara braunii HOM05D006139 ORTHO05D007681 8.4e-44 182.2 262 39.3
Nitab4.5_0001526g0130 Nicotiana tabacum HOM05D006139 ORTHO05D007681 8.7e-41 172.2 120 67.5
HPP92_015930 Vanilla planifolia HOM05D006139 ORTHO05D007681 1.5e-37 161.4 145 55.9
Hund20183 Selenicereus undatus HOM05D006139 ORTHO05D007681 3.2e-35 153.7 189 46.6
SEGI_35696 Sequoiadendron giganteum HOM05D003704 ORTHO05D005892 5.4e-35 152.9 107 70.1
SEGI_12572 Sequoiadendron giganteum HOM05D003704 ORTHO05D005892 5.1e-33 146.4 107 68.2
SEGI_29464 Sequoiadendron giganteum HOM05D007858 ORTHO05D000002 2.0e-29 134.4 104 64.4
CDE02G2779 Ceratophyllum demersum HOM05D006139 ORTHO05D007681 1.7e-20 104.8 142 43.0
SEGI_10224 Sequoiadendron giganteum HOM05D003704 ORTHO05D009944 2.9e-20 104.0 72 70.8
CARHR154100 Cardamine hirsuta HOM05D006139 ORTHO05D007681 3.3e-16 90.5 64 65.6
SEGI_24138 Sequoiadendron giganteum HOM05D003704 ORTHO05D385883 3.8e-12 77.0 56 67.9
Cfa021664 Carpinus fangiana HOM05D006139 ORTHO05D007681 2.5e-11 74.3 270 24.1
SEGI_14781 Sequoiadendron giganteum HOM05D000817 ORTHO05D000702 2.5e-11 74.3 91 46.2
vmacro12608 Vaccinium macrocarpon HOM05D006139 ORTHO05D007681 4.6e-10 70.1 65 58.5
Cpa.g.sc77.50 Carica papaya HOM05D006139 ORTHO05D007681 1.8e-09 68.2 67 50.7
SEGI_28127 Sequoiadendron giganteum HOM05D003704 ORTHO05D000044 5.1e-09 66.6 104 36.5
SEGI_16508 Sequoiadendron giganteum HOM05D003704 ORTHO05D384205 6.7e-09 66.2 94 40.4
SEGI_27068 Sequoiadendron giganteum HOM05D003704 ORTHO05D383797 8.7e-09 65.9 107 31.8
SEGI_17018 Sequoiadendron giganteum HOM05D000267 ORTHO05D009944 3.7e-07 60.5 68 51.5
AUR62043732 Chenopodium quinoa HOM05D006139 ORTHO05D007681 9.0e-06 55.8 59 47.5


User provided reference genes

Program Settings